RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 HIGD1BQ9P298 99 aa6.74□□□□□ -1.33
YBX3-217ENST00000546164 LAMTOR3Q9UHA4 124 aa6.74□□□□□ -1.33
YBX3-217ENST00000546164 LINC01547P58512 204 aaPredicted RBP6.73□□□□□ -1.33
YBX3-217ENST00000546164 TAL2Q16559 108 aa6.73□□□□□ -1.33
YBX3-217ENST00000546164 VAMP3Q15836 100 aa6.72□□□□□ -1.33
YBX3-217ENST00000546164 Q8N377 158 aa6.72□□□□□ -1.33
YBX3-217ENST00000546164 MUC2Q02817 5179 aa6.72□□□□□ -1.33
YBX3-217ENST00000546164 C2orf91Q6ZV80 131 aa6.71□□□□□ -1.34
YBX3-217ENST00000546164 SMIM29Q86T20 159 aa6.71□□□□□ -1.34
YBX3-217ENST00000546164 SLC25A20O43772 301 aa6.7□□□□□ -1.34
YBX3-217ENST00000546164 PYY3Q5JQD4 70 aa6.7□□□□□ -1.34
YBX3-217ENST00000546164 LINC00575Q6W349 94 aa6.7□□□□□ -1.34
YBX3-217ENST00000546164 DEFB105AQ8NG35 78 aa6.7□□□□□ -1.34
YBX3-217ENST00000546164 Q1RN00 199 aa6.69□□□□□ -1.34
YBX3-217ENST00000546164 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
YBX3-217ENST00000546164 C12orf57Q99622 126 aa6.69□□□□□ -1.34
YBX3-217ENST00000546164 TMEM238LA0A1B0GVL6 79 aa6.68□□□□□ -1.34
YBX3-217ENST00000546164 CFC1BP0CG36 223 aa6.68□□□□□ -1.34
YBX3-217ENST00000546164 CFC1P0CG37 223 aa6.68□□□□□ -1.34
YBX3-217ENST00000546164 CD164Q04900 197 aa6.68□□□□□ -1.34
YBX3-217ENST00000546164 CDIP1Q9H305 208 aa6.68□□□□□ -1.34
YBX3-217ENST00000546164 PRO1933Q9H354 126 aa6.68□□□□□ -1.34
YBX3-217ENST00000546164 A0A0B4J2C4 111 aa6.67□□□□□ -1.34
YBX3-217ENST00000546164 hADV29S1A0JD25 119 aa6.67□□□□□ -1.34
YBX3-217ENST00000546164 KRTAP13-3Q3SY46 172 aa6.67□□□□□ -1.34
YBX3-217ENST00000546164 BVES-AS1Q5T3Y7 98 aa6.67□□□□□ -1.34
YBX3-217ENST00000546164 LIMD2Q9BT23 127 aa6.66□□□□□ -1.34
YBX3-217ENST00000546164 Q6ZQY7 126 aa6.65□□□□□ -1.34
YBX3-217ENST00000546164 CEND1Q8N111 149 aa6.65□□□□□ -1.34
YBX3-217ENST00000546164 RAB37Q96AX2 223 aa6.65□□□□□ -1.34
YBX3-217ENST00000546164 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.34
YBX3-217ENST00000546164 Q5XG85 94 aa6.64□□□□□ -1.35
YBX3-217ENST00000546164 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.64□□□□□ -1.35
YBX3-217ENST00000546164 H7C2G1 150 aa6.62□□□□□ -1.35
YBX3-217ENST00000546164 FXYD2P54710 66 aa6.62□□□□□ -1.35
YBX3-217ENST00000546164 HRCT1Q6UXD1 115 aa6.62□□□□□ -1.35
YBX3-217ENST00000546164 PPDPFLQ8WWR9 84 aa6.62□□□□□ -1.35
YBX3-217ENST00000546164 IGLV8-61A0A075B6I0 122 aa6.61□□□□□ -1.35
YBX3-217ENST00000546164 H0YGX0 51 aa6.61□□□□□ -1.35
YBX3-217ENST00000546164 F8WEM9 126 aa6.6□□□□□ -1.35
YBX3-217ENST00000546164 HSD52Q0P140 79 aa6.6□□□□□ -1.35
YBX3-217ENST00000546164 PRO1854Q9UHT4 67 aa6.6□□□□□ -1.35
YBX3-217ENST00000546164 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
YBX3-217ENST00000546164 Q6JHZ5 121 aa6.59□□□□□ -1.35
YBX3-217ENST00000546164 A0A0G2JQZ4 141 aa6.58□□□□□ -1.36
YBX3-217ENST00000546164 KRTAP9-7A8MTY7 169 aa6.58□□□□□ -1.36
YBX3-217ENST00000546164 SNCGO76070 127 aa6.58□□□□□ -1.36
YBX3-217ENST00000546164 UQCR10Q9UDW1 63 aa6.58□□□□□ -1.36
YBX3-217ENST00000546164 A0A1B0GX51 115 aa6.57□□□□□ -1.36
YBX3-217ENST00000546164 OCIAD2Q56VL3 154 aa6.57□□□□□ -1.36
YBX3-217ENST00000546164 FAM218AQ96MZ4 157 aa6.57□□□□□ -1.36
YBX3-217ENST00000546164 CLEC2BQ92478 149 aa6.56□□□□□ -1.36
YBX3-217ENST00000546164 KRTAP9-8Q9BYQ0 159 aa6.56□□□□□ -1.36
YBX3-217ENST00000546164 ASB16-AS1Q495Z4 193 aa6.55□□□□□ -1.36
YBX3-217ENST00000546164 IGFL1Q6UW32 110 aa6.55□□□□□ -1.36
YBX3-217ENST00000546164 SNHG12Q9BXW3 62 aa6.55□□□□□ -1.36
YBX3-217ENST00000546164 TRIAP1O43715 76 aa6.54□□□□□ -1.36
YBX3-217ENST00000546164 C1orf195Q5TG92 126 aa6.54□□□□□ -1.36
YBX3-217ENST00000546164 A0A0U1RQV1 116 aa6.53□□□□□ -1.36
YBX3-217ENST00000546164 TCL1BO95988 128 aa6.53□□□□□ -1.36
YBX3-217ENST00000546164 TRBV7-7A0A0K0K1E9 115 aa6.52□□□□□ -1.37
YBX3-217ENST00000546164 SEC61BP60468 96 aaKnown RBP6.52□□□□□ -1.37
YBX3-217ENST00000546164 K7ERJ3 54 aa6.51□□□□□ -1.37
YBX3-217ENST00000546164 H3BUT2 72 aa6.5□□□□□ -1.37
YBX3-217ENST00000546164 NDUFV3P56181 108 aaKnown RBP6.5□□□□□ -1.37
YBX3-217ENST00000546164 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
YBX3-217ENST00000546164 COX6CP09669 75 aa6.48□□□□□ -1.37
YBX3-217ENST00000546164 PSMB2P49721 201 aa6.48□□□□□ -1.37
YBX3-217ENST00000546164 Q6Q795 121 aa6.48□□□□□ -1.37
YBX3-217ENST00000546164 H3BQ85 93 aa6.47□□□□□ -1.37
YBX3-217ENST00000546164 SMIM6P0DI80 62 aa6.47□□□□□ -1.37
YBX3-217ENST00000546164 C9orf92A6NGG3 77 aa6.46□□□□□ -1.38
YBX3-217ENST00000546164 H3BS24 57 aa6.46□□□□□ -1.38
YBX3-217ENST00000546164 DNAL4O96015 105 aa6.46□□□□□ -1.38
YBX3-217ENST00000546164 H3BMG7 143 aa6.45□□□□□ -1.38
YBX3-217ENST00000546164 FABP2P12104 132 aa6.45□□□□□ -1.38
YBX3-217ENST00000546164 TEN1Q86WV5 123 aa6.45□□□□□ -1.38
YBX3-217ENST00000546164 ORMDL1Q9P0S3 153 aa6.45□□□□□ -1.38
YBX3-217ENST00000546164 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
YBX3-217ENST00000546164 KRTAP4-1Q9BYQ7 146 aa6.44□□□□□ -1.38
YBX3-217ENST00000546164 SS18L2Q9UHA2 77 aa6.44□□□□□ -1.38
YBX3-217ENST00000546164 TRACP01848 142 aa6.43□□□□□ -1.38
YBX3-217ENST00000546164 TMEM256-PLSCR3K7ERE1 68 aa6.42□□□□□ -1.38
YBX3-217ENST00000546164 M0R143 59 aa6.41□□□□□ -1.38
YBX3-217ENST00000546164 LST1O00453 97 aa6.41□□□□□ -1.38
YBX3-217ENST00000546164 UBE2V1Q13404 147 aa6.4□□□□□ -1.38
YBX3-217ENST00000546164 A0A087WSZ3 146 aa6.39□□□□□ -1.39
YBX3-217ENST00000546164 A0A1W2PNM2 257 aa6.39□□□□□ -1.39
YBX3-217ENST00000546164 SCGB1C2P0DMR2 95 aa6.39□□□□□ -1.39
YBX3-217ENST00000546164 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
YBX3-217ENST00000546164 PCOTHQ58A44 107 aa6.39□□□□□ -1.39
YBX3-217ENST00000546164 ANKRD29Q8N6D5 301 aa6.38□□□□□ -1.39
YBX3-217ENST00000546164 TRBV7-4A0A0J9YYF1 115 aa6.37□□□□□ -1.39
YBX3-217ENST00000546164 TSTD3H0UI37 97 aa6.36□□□□□ -1.39
YBX3-217ENST00000546164 LOC105371267A0A1B0GV96 52 aa6.35□□□□□ -1.39
YBX3-217ENST00000546164 Q96NJ1 140 aa6.35□□□□□ -1.39
YBX3-217ENST00000546164 A0A1B0GV72 72 aa6.33□□□□□ -1.4
YBX3-217ENST00000546164 OBSCN-AS1Q96MR7 158 aa6.33□□□□□ -1.4
YBX3-217ENST00000546164 CCKP06307 115 aa6.32□□□□□ -1.4
YBX3-217ENST00000546164 BAALC-AS2P0C853 105 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms