RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 A8MUN3 132 aa8.96□□□□□ -0.97
SRP54-202ENST00000546080 TRRAPQ9Y4A5 3859 aa8.96□□□□□ -0.98
SRP54-202ENST00000546080 PMAIP1Q13794 54 aa8.96□□□□□ -0.98
SRP54-202ENST00000546080 IGLV8-61A0A075B6I0 122 aa8.95□□□□□ -0.98
SRP54-202ENST00000546080 H0Y9P7 68 aa8.95□□□□□ -0.98
SRP54-202ENST00000546080 PRLHP81277 87 aa8.95□□□□□ -0.98
SRP54-202ENST00000546080 LINC00588Q9Y4M8 146 aa8.95□□□□□ -0.98
SRP54-202ENST00000546080 KRTAP29-1A8MX34 341 aaPredicted RBP8.95□□□□□ -0.98
SRP54-202ENST00000546080 H3BPC8 53 aa8.93□□□□□ -0.98
SRP54-202ENST00000546080 CASC2Q6XLA1 102 aa8.93□□□□□ -0.98
SRP54-202ENST00000546080 SPANXA2-OT1Q8N9U9 137 aa8.93□□□□□ -0.98
SRP54-202ENST00000546080 PKD1L1Q8TDX9 2849 aa8.93□□□□□ -0.98
SRP54-202ENST00000546080 UBE2AP49459 152 aa8.92□□□□□ -0.98
SRP54-202ENST00000546080 ATRQ13535 2644 aa8.91□□□□□ -0.98
SRP54-202ENST00000546080 Q5VV11 94 aa8.9□□□□□ -0.98
SRP54-202ENST00000546080 DNAH1Q9P2D7 4330 aa8.89□□□□□ -0.99
SRP54-202ENST00000546080 CNBPP62633 177 aaKnown RBP8.89□□□□□ -0.99
SRP54-202ENST00000546080 IGKV2-24A0A0C4DH68 120 aa8.88□□□□□ -0.99
SRP54-202ENST00000546080 A0A096LNI7 61 aa8.88□□□□□ -0.99
SRP54-202ENST00000546080 A8MWP4 228 aa8.88□□□□□ -0.99
SRP54-202ENST00000546080 LIMD2Q9BT23 127 aa8.88□□□□□ -0.99
SRP54-202ENST00000546080 Q8N9P0 234 aaPredicted RBP8.87□□□□□ -0.99
SRP54-202ENST00000546080 C16orf90A8MZG2 172 aa8.85□□□□□ -0.99
SRP54-202ENST00000546080 CHKB-CPT1BH3BT56 60 aa8.85□□□□□ -0.99
SRP54-202ENST00000546080 A8MU10 97 aa8.84□□□□□ -0.99
SRP54-202ENST00000546080 KRTAP21-3Q3LHN1 58 aa8.84□□□□□ -0.99
SRP54-202ENST00000546080 C9orf163Q8N9P6 203 aa8.84□□□□□ -0.99
SRP54-202ENST00000546080 PRR15LQ9BU68 103 aa8.84□□□□□ -0.99
SRP54-202ENST00000546080 LINC00472Q9H8W2 130 aa8.83□□□□□ -1
SRP54-202ENST00000546080 FBN1P35555 2871 aaKnown RBP8.82□□□□□ -1
SRP54-202ENST00000546080 ANK2Q01484 3957 aa8.81□□□□□ -1
SRP54-202ENST00000546080 H0Y9J4 135 aa8.81□□□□□ -1
SRP54-202ENST00000546080 TENM3Q9P273 2699 aa8.81□□□□□ -1
SRP54-202ENST00000546080 SPRR1BP22528 89 aa8.8□□□□□ -1
SRP54-202ENST00000546080 COL6A5A8TX70 2615 aa8.8□□□□□ -1
SRP54-202ENST00000546080 COA5Q86WW8 74 aa8.79□□□□□ -1
SRP54-202ENST00000546080 MMP24-AS1A0A0U1RRL7 71 aa8.78□□□□□ -1
SRP54-202ENST00000546080 PHF5AQ7RTV0 110 aaKnown RBP8.78□□□□□ -1
SRP54-202ENST00000546080 IGLV7-46A0A075B6I9 117 aa8.77□□□□□ -1.01
SRP54-202ENST00000546080 KRTAP11-1Q8IUC1 163 aa8.76□□□□□ -1.01
SRP54-202ENST00000546080 STAB1Q9NY15 2570 aa8.76□□□□□ -1.01
SRP54-202ENST00000546080 Q75L30 129 aa8.76□□□□□ -1.01
SRP54-202ENST00000546080 CHTF8P0CG12 524 aa8.74□□□□□ -1.01
SRP54-202ENST00000546080 A6NED7 52 aa8.73□□□□□ -1.01
SRP54-202ENST00000546080 LOC101927531A0A1B0GV80 90 aa8.73□□□□□ -1.01
SRP54-202ENST00000546080 PCOTHQ58A44 107 aa8.73□□□□□ -1.01
SRP54-202ENST00000546080 SPTSSBQ8NFR3 76 aa8.73□□□□□ -1.01
SRP54-202ENST00000546080 CD164Q04900 197 aa8.71□□□□□ -1.01
SRP54-202ENST00000546080 KRTAP1-5Q9BYS1 174 aa8.71□□□□□ -1.01
SRP54-202ENST00000546080 TP53AIP1Q9HCN2 124 aa8.71□□□□□ -1.02
SRP54-202ENST00000546080 LCA10Q71F78 164 aa8.7□□□□□ -1.02
SRP54-202ENST00000546080 ATP11AUNQ6ZP68 121 aa8.69□□□□□ -1.02
SRP54-202ENST00000546080 KTN1-AS1Q86SY8 53 aa8.69□□□□□ -1.02
SRP54-202ENST00000546080 CMYA5Q8N3K9 4069 aa8.68□□□□□ -1.02
SRP54-202ENST00000546080 MOBPQ13875 183 aa8.68□□□□□ -1.02
SRP54-202ENST00000546080 DNAH10Q8IVF4 4471 aa8.68□□□□□ -1.02
SRP54-202ENST00000546080 C14orf177Q52M58 125 aa8.68□□□□□ -1.02
SRP54-202ENST00000546080 KRTAP24-1Q3LI83 254 aa8.66□□□□□ -1.02
SRP54-202ENST00000546080 ASB16-AS1Q495Z4 193 aa8.66□□□□□ -1.02
SRP54-202ENST00000546080 Q96NJ1 140 aa8.66□□□□□ -1.02
SRP54-202ENST00000546080 C8orf17Q9NRJ1 99 aa8.65□□□□□ -1.02
SRP54-202ENST00000546080 DNAH3Q8TD57 4116 aa8.65□□□□□ -1.02
SRP54-202ENST00000546080 SPAG11AQ6PDA7 123 aa8.65□□□□□ -1.03
SRP54-202ENST00000546080 Q6ZR54 194 aa8.65□□□□□ -1.03
SRP54-202ENST00000546080 CDC42SE1Q9NRR8 79 aa8.65□□□□□ -1.03
SRP54-202ENST00000546080 LINC01558Q9Y6Z2 57 aa8.65□□□□□ -1.03
SRP54-202ENST00000546080 IGLV9-49A0A0B4J1Y8 123 aa8.64□□□□□ -1.03
SRP54-202ENST00000546080 NDUFS5O43920 106 aa8.64□□□□□ -1.03
SRP54-202ENST00000546080 UBE2DNLQ8IWF7 75 aa8.62□□□□□ -1.03
SRP54-202ENST00000546080 KRTAP13-1Q8IUC0 172 aa8.62□□□□□ -1.03
SRP54-202ENST00000546080 PLAC8Q9NZF1 115 aa8.61□□□□□ -1.03
SRP54-202ENST00000546080 SRRM2Q9UQ35 2752 aaKnown RBP8.6□□□□□ -1.03
SRP54-202ENST00000546080 IGHV6-1A0A0B4J1U7 121 aa8.6□□□□□ -1.03
SRP54-202ENST00000546080 A6NN06 94 aa8.6□□□□□ -1.03
SRP54-202ENST00000546080 HUWE1Q7Z6Z7 4374 aaKnown RBP8.59□□□□□ -1.03
SRP54-202ENST00000546080 A0A1B0GVX0 72 aa8.59□□□□□ -1.03
SRP54-202ENST00000546080 CDK2AP2O75956 126 aa8.58□□□□□ -1.04
SRP54-202ENST00000546080 DNAH9Q9NYC9 4486 aa8.58□□□□□ -1.04
SRP54-202ENST00000546080 HRES1P13985 223 aa8.58□□□□□ -1.04
SRP54-202ENST00000546080 DNHD1Q96M86 4753 aa8.57□□□□□ -1.04
SRP54-202ENST00000546080 MRPL34Q9BQ48 92 aaKnown RBP8.56□□□□□ -1.04
SRP54-202ENST00000546080 PANO1I0J062 215 aa8.56□□□□□ -1.04
SRP54-202ENST00000546080 RBM12B-AS1Q9P1G2 102 aa8.56□□□□□ -1.04
SRP54-202ENST00000546080 TENM2Q9NT68 2774 aa8.56□□□□□ -1.04
SRP54-202ENST00000546080 K7EIL1 84 aa8.55□□□□□ -1.04
SRP54-202ENST00000546080 LYSTQ99698 3801 aa8.55□□□□□ -1.04
SRP54-202ENST00000546080 MDFIQ99750 246 aa8.55□□□□□ -1.04
SRP54-202ENST00000546080 SPINK7P58062 85 aa8.53□□□□□ -1.04
SRP54-202ENST00000546080 LINC00483Q53H64 154 aa8.53□□□□□ -1.04
SRP54-202ENST00000546080 NBEAL1Q6ZS30 2694 aa8.51□□□□□ -1.05
SRP54-202ENST00000546080 APLNQ9ULZ1 77 aa8.51□□□□□ -1.05
SRP54-202ENST00000546080 MGAM2Q2M2H8 2515 aa8.5□□□□□ -1.05
SRP54-202ENST00000546080 C7orf65Q6ZTY9 151 aa8.5□□□□□ -1.05
SRP54-202ENST00000546080 ZNF706Q9Y5V0 76 aaPredicted RBP8.5□□□□□ -1.05
SRP54-202ENST00000546080 NOTCH1P46531 2555 aa8.49□□□□□ -1.05
SRP54-202ENST00000546080 A0A087X002 238 aa8.48□□□□□ -1.05
SRP54-202ENST00000546080 NOTCH2NLQ7Z3S9 236 aa8.48□□□□□ -1.05
SRP54-202ENST00000546080 WWC2-AS2Q96NR7 200 aa8.48□□□□□ -1.05
SRP54-202ENST00000546080 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
SRP54-202ENST00000546080 SPACA4Q8TDM5 124 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms