RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 PRRC2CQ9Y520 2896 aaKnown RBP3.21□□□□□ -1.9
UBE4A-203ENST00000545354 A0A1W2PNU3 283 aaPredicted RBP3.2□□□□□ -1.9
UBE4A-203ENST00000545354 KLK12Q9UKR0 248 aa3.2□□□□□ -1.9
UBE4A-203ENST00000545354 MINOS1-NBL1R4GNA1 71 aa3.2□□□□□ -1.9
UBE4A-203ENST00000545354 CCDC168Q8NDH2 2452 aa3.2□□□□□ -1.9
UBE4A-203ENST00000545354 KLK9Q2XQG4 91 aa3.2□□□□□ -1.9
UBE4A-203ENST00000545354 C15orf56Q8N910 161 aa3.2□□□□□ -1.9
UBE4A-203ENST00000545354 ANKHD1Q8IWZ3 2542 aaKnown RBP3.2□□□□□ -1.9
UBE4A-203ENST00000545354 IGLV6-57P01721 117 aa3.19□□□□□ -1.9
UBE4A-203ENST00000545354 PRR9Q5T870 116 aa3.19□□□□□ -1.9
UBE4A-203ENST00000545354 RP1P56715 2156 aa3.19□□□□□ -1.9
UBE4A-203ENST00000545354 SPTY2D1-AS1A0A0U1RR47 76 aa3.19□□□□□ -1.9
UBE4A-203ENST00000545354 KRTAP23-1A1A580 65 aa3.19□□□□□ -1.9
UBE4A-203ENST00000545354 KRTAP17-1Q9BYP8 105 aa3.19□□□□□ -1.9
UBE4A-203ENST00000545354 NBEAL1Q6ZS30 2694 aa3.19□□□□□ -1.9
UBE4A-203ENST00000545354 SEC16AO15027 2179 aa3.18□□□□□ -1.9
UBE4A-203ENST00000545354 PANO1I0J062 215 aa3.18□□□□□ -1.9
UBE4A-203ENST00000545354 HRES1P13985 223 aa3.18□□□□□ -1.9
UBE4A-203ENST00000545354 DSCR10P59022 87 aa3.18□□□□□ -1.9
UBE4A-203ENST00000545354 DEFB110Q30KQ9 67 aa3.18□□□□□ -1.9
UBE4A-203ENST00000545354 TOMM7Q9P0U1 55 aa3.18□□□□□ -1.9
UBE4A-203ENST00000545354 DCHS2Q6V1P9 2916 aa3.18□□□□□ -1.9
UBE4A-203ENST00000545354 MALRD1Q5VYJ5 2156 aa3.18□□□□□ -1.9
UBE4A-203ENST00000545354 U3KQA8 63 aa3.17□□□□□ -1.9
UBE4A-203ENST00000545354 CADP27708 2225 aa3.17□□□□□ -1.9
UBE4A-203ENST00000545354 Q8NBF4 154 aa3.17□□□□□ -1.9
UBE4A-203ENST00000545354 HIVEP3Q5T1R4 2406 aa3.16□□□□□ -1.9
UBE4A-203ENST00000545354 KRTAP29-1A8MX34 341 aaPredicted RBP3.16□□□□□ -1.9
UBE4A-203ENST00000545354 K7EQZ3 153 aa3.16□□□□□ -1.9
UBE4A-203ENST00000545354 ANGP03950 147 aaKnown RBP3.16□□□□□ -1.9
UBE4A-203ENST00000545354 IGLV7-43P04211 117 aa3.16□□□□□ -1.9
UBE4A-203ENST00000545354 DEFB133Q30KQ1 61 aa3.16□□□□□ -1.9
UBE4A-203ENST00000545354 COL27A1Q8IZC6 1860 aaPredicted RBP3.16□□□□□ -1.9
UBE4A-203ENST00000545354 KRTAP3-1Q9BYR8 98 aa3.16□□□□□ -1.9
UBE4A-203ENST00000545354 LINC00472Q9H8W2 130 aa3.16□□□□□ -1.9
UBE4A-203ENST00000545354 MED13LQ71F56 2210 aa3.15□□□□□ -1.9
UBE4A-203ENST00000545354 KRTAP15-1Q3LI76 137 aa3.15□□□□□ -1.91
UBE4A-203ENST00000545354 PATE1Q8WXA2 126 aa3.15□□□□□ -1.91
UBE4A-203ENST00000545354 KRTAP4-5Q9BYR2 181 aa3.15□□□□□ -1.91
UBE4A-203ENST00000545354 MAP1AP78559 2803 aaPredicted RBP3.15□□□□□ -1.91
UBE4A-203ENST00000545354 STAB1Q9NY15 2570 aa3.15□□□□□ -1.91
UBE4A-203ENST00000545354 CNTRLQ7Z7A1 2325 aa3.14□□□□□ -1.91
UBE4A-203ENST00000545354 DEFB104AQ8WTQ1 72 aa3.14□□□□□ -1.91
UBE4A-203ENST00000545354 LYNX1G3V0Z9 82 aa3.13□□□□□ -1.91
UBE4A-203ENST00000545354 ATRQ13535 2644 aa3.13□□□□□ -1.91
UBE4A-203ENST00000545354 A0A087WTM6 91 aa3.13□□□□□ -1.91
UBE4A-203ENST00000545354 A0A0J9YWU9 116 aa3.13□□□□□ -1.91
UBE4A-203ENST00000545354 WWC2-AS2Q96NR7 200 aa3.13□□□□□ -1.91
UBE4A-203ENST00000545354 ZNF469Q96JG9 3925 aaPredicted RBP3.12□□□□□ -1.91
UBE4A-203ENST00000545354 FBN1P35555 2871 aaKnown RBP3.12□□□□□ -1.91
UBE4A-203ENST00000545354 APELAP0DMC3 54 aa3.12□□□□□ -1.91
UBE4A-203ENST00000545354 ANAPC11Q9NYG5 84 aa3.12□□□□□ -1.91
UBE4A-203ENST00000545354 A0A1B0GU33 70 aa3.11□□□□□ -1.91
UBE4A-203ENST00000545354 WFDC10BQ8IUB3 73 aa3.11□□□□□ -1.91
UBE4A-203ENST00000545354 CCL19Q99731 98 aa3.11□□□□□ -1.91
UBE4A-203ENST00000545354 KAAG1Q9UBP8 84 aa3.11□□□□□ -1.91
UBE4A-203ENST00000545354 JMJD1CQ15652 2540 aa3.11□□□□□ -1.91
UBE4A-203ENST00000545354 COL6A5A8TX70 2615 aa3.11□□□□□ -1.91
UBE4A-203ENST00000545354 MINOS1Q5TGZ0 78 aa3.11□□□□□ -1.91
UBE4A-203ENST00000545354 WFDC13Q8IUB5 93 aa3.11□□□□□ -1.91
UBE4A-203ENST00000545354 ACANP16112 2415 aa3.11□□□□□ -1.91
UBE4A-203ENST00000545354 C6orf48Q9UBA6 75 aa3.1□□□□□ -1.91
UBE4A-203ENST00000545354 FN1P02751 2386 aaKnown RBP3.1□□□□□ -1.91
UBE4A-203ENST00000545354 SORL1Q92673 2214 aa3.1□□□□□ -1.91
UBE4A-203ENST00000545354 DEFB131AP59861 70 aa3.1□□□□□ -1.91
UBE4A-203ENST00000545354 RTTNQ86VV8 2226 aa3.09□□□□□ -1.91
UBE4A-203ENST00000545354 CSPG4Q6UVK1 2322 aa3.09□□□□□ -1.91
UBE4A-203ENST00000545354 IGKV2-24A0A0C4DH68 120 aa3.09□□□□□ -1.91
UBE4A-203ENST00000545354 Q6ZSN1 163 aa3.09□□□□□ -1.91
UBE4A-203ENST00000545354 PLCE1Q9P212 2302 aa3.09□□□□□ -1.91
UBE4A-203ENST00000545354 DEFB109BQ30KR1 87 aa3.08□□□□□ -1.92
UBE4A-203ENST00000545354 C16orf74Q96GX8 76 aa3.08□□□□□ -1.92
UBE4A-203ENST00000545354 GVQW2A0A096LPI5 108 aaPredicted RBP3.08□□□□□ -1.92
UBE4A-203ENST00000545354 LY6G6CO95867 125 aa3.08□□□□□ -1.92
UBE4A-203ENST00000545354 PCOTHQ58A44 107 aa3.08□□□□□ -1.92
UBE4A-203ENST00000545354 LINC00304Q8N9R0 145 aa3.08□□□□□ -1.92
UBE4A-203ENST00000545354 Q96NJ1 140 aa3.08□□□□□ -1.92
UBE4A-203ENST00000545354 NSD1Q96L73 2696 aaPredicted RBP3.08□□□□□ -1.92
UBE4A-203ENST00000545354 PKDREJQ9NTG1 2253 aa3.08□□□□□ -1.92
UBE4A-203ENST00000545354 SSBP3-AS1Q7Z2R9 100 aa3.07□□□□□ -1.92
UBE4A-203ENST00000545354 ABCA4P78363 2273 aa3.07□□□□□ -1.92
UBE4A-203ENST00000545354 VPS13CQ709C8 3753 aa3.07□□□□□ -1.92
UBE4A-203ENST00000545354 NBDYA0A0U1RRE5 68 aa3.07□□□□□ -1.92
UBE4A-203ENST00000545354 KRTAP10-9P60411 292 aa3.07□□□□□ -1.92
UBE4A-203ENST00000545354 KRTAP11-1Q8IUC1 163 aa3.07□□□□□ -1.92
UBE4A-203ENST00000545354 RPL37AP61513 92 aaKnown RBP3.06□□□□□ -1.92
UBE4A-203ENST00000545354 KRTAP9-8Q9BYQ0 159 aa3.06□□□□□ -1.92
UBE4A-203ENST00000545354 FLNAP21333 2647 aaKnown RBP3.05□□□□□ -1.92
UBE4A-203ENST00000545354 A0A1W2PNN7 141 aa3.05□□□□□ -1.92
UBE4A-203ENST00000545354 FAM168BA1KXE4 195 aa3.05□□□□□ -1.92
UBE4A-203ENST00000545354 Q6YL49 198 aa3.05□□□□□ -1.92
UBE4A-203ENST00000545354 Q8N1X5 172 aa3.05□□□□□ -1.92
UBE4A-203ENST00000545354 MXRA5Q9NR99 2828 aa3.05□□□□□ -1.92
UBE4A-203ENST00000545354 A0A0G2JQZ4 141 aa3.05□□□□□ -1.92
UBE4A-203ENST00000545354 A0A1B0GUV1 79 aa3.05□□□□□ -1.92
UBE4A-203ENST00000545354 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
UBE4A-203ENST00000545354 C5orf56Q8N8D9 126 aa3.05□□□□□ -1.92
UBE4A-203ENST00000545354 USMG5Q96IX5 58 aa3.05□□□□□ -1.92
UBE4A-203ENST00000545354 H3BUA1 57 aa3.04□□□□□ -1.92
UBE4A-203ENST00000545354 Q8N377 158 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms