RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 PCP2Q8IVA1 136 aa2□□□□□ -2.09
SNHG1-220ENST00000544550 MAP1LC3CQ9BXW4 147 aa2□□□□□ -2.09
SNHG1-220ENST00000544550 NAT8Q9UHE5 227 aa2□□□□□ -2.09
SNHG1-220ENST00000544550 TRAV23DV6A0A075B6W5 121 aa1.99□□□□□ -2.09
SNHG1-220ENST00000544550 ZNF73O43830 326 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-220ENST00000544550 ZNF22P17026 224 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-220ENST00000544550 ADCYAP1P18509 176 aa1.99□□□□□ -2.09
SNHG1-220ENST00000544550 SLC51BQ86UW2 128 aa1.99□□□□□ -2.09
SNHG1-220ENST00000544550 MIR7-3HGQ8N6C7 128 aa1.99□□□□□ -2.09
SNHG1-220ENST00000544550 OBSCN-AS1Q96MR7 158 aa1.99□□□□□ -2.09
SNHG1-220ENST00000544550 SPANXB1Q9NS25 103 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-220ENST00000544550 A0A0G2JQZ4 141 aa1.98□□□□□ -2.09
SNHG1-220ENST00000544550 A8MWP4 228 aa1.98□□□□□ -2.09
SNHG1-220ENST00000544550 SRP19P09132 144 aaKnown RBP1.98□□□□□ -2.09
SNHG1-220ENST00000544550 SMIM13P0DJ93 91 aa1.98□□□□□ -2.09
SNHG1-220ENST00000544550 COMMD7Q86VX2 200 aa1.98□□□□□ -2.09
SNHG1-220ENST00000544550 LOC107984156A0A0G2JMH3 177 aa1.97□□□□□ -2.09
SNHG1-220ENST00000544550 TEX49A0A1B0GTD5 131 aa1.97□□□□□ -2.09
SNHG1-220ENST00000544550 A6NDN8 102 aa1.97□□□□□ -2.09
SNHG1-220ENST00000544550 A6NN06 94 aa1.97□□□□□ -2.09
SNHG1-220ENST00000544550 NDUFA6P56556 154 aa1.97□□□□□ -2.09
SNHG1-220ENST00000544550 HERVK_113P61574 105 aa1.97□□□□□ -2.09
SNHG1-220ENST00000544550 TAL2Q16559 108 aa1.97□□□□□ -2.09
SNHG1-220ENST00000544550 TMEM170BQ5T4T1 132 aa1.97□□□□□ -2.09
SNHG1-220ENST00000544550 ARL17AQ8IVW1 177 aa1.97□□□□□ -2.09
SNHG1-220ENST00000544550 Q96NJ1 140 aa1.97□□□□□ -2.09
SNHG1-220ENST00000544550 MIEN1Q9BRT3 115 aa1.97□□□□□ -2.09
SNHG1-220ENST00000544550 KRTAP2-1Q9BYU5 128 aa1.97□□□□□ -2.09
SNHG1-220ENST00000544550 LINC01546A6NGU7 62 aa1.96□□□□□ -2.1
SNHG1-220ENST00000544550 NDUFC2O95298 119 aa1.96□□□□□ -2.1
SNHG1-220ENST00000544550 VAMP3Q15836 100 aa1.96□□□□□ -2.1
SNHG1-220ENST00000544550 IGFL1Q6UW32 110 aa1.96□□□□□ -2.1
SNHG1-220ENST00000544550 CAMK2N1Q7Z7J9 78 aa1.96□□□□□ -2.1
SNHG1-220ENST00000544550 BATF3Q9NR55 127 aa1.96□□□□□ -2.1
SNHG1-220ENST00000544550 MYMXA0A1B0GTQ4 84 aa1.95□□□□□ -2.1
SNHG1-220ENST00000544550 A8MUU9 505 aa1.95□□□□□ -2.1
SNHG1-220ENST00000544550 RGS21Q2M5E4 152 aa1.95□□□□□ -2.1
SNHG1-220ENST00000544550 DEFB105AQ8NG35 78 aa1.95□□□□□ -2.1
SNHG1-220ENST00000544550 SMCO4Q9NRQ5 59 aa1.95□□□□□ -2.1
SNHG1-220ENST00000544550 C11orf86A6NJI1 115 aa1.94□□□□□ -2.1
SNHG1-220ENST00000544550 HBDP02042 147 aa1.94□□□□□ -2.1
SNHG1-220ENST00000544550 IFITM2Q01629 132 aa1.94□□□□□ -2.1
SNHG1-220ENST00000544550 MDN1Q9NU22 5596 aa1.93□□□□□ -2.1
SNHG1-220ENST00000544550 KMT2DO14686 5537 aa1.93□□□□□ -2.1
SNHG1-220ENST00000544550 TMEM223A0PJW6 202 aa1.93□□□□□ -2.1
SNHG1-220ENST00000544550 ZNF815PA8K554 130 aa1.93□□□□□ -2.1
SNHG1-220ENST00000544550 F8WEM9 126 aa1.93□□□□□ -2.1
SNHG1-220ENST00000544550 HRES1P13985 223 aa1.93□□□□□ -2.1
SNHG1-220ENST00000544550 NMUP48645 174 aa1.93□□□□□ -2.1
SNHG1-220ENST00000544550 ELOF1P60002 83 aaKnown RBP1.93□□□□□ -2.1
SNHG1-220ENST00000544550 PEA15Q15121 130 aa1.93□□□□□ -2.1
SNHG1-220ENST00000544550 RHEBQ15382 184 aa1.93□□□□□ -2.1
SNHG1-220ENST00000544550 BAGE3Q86Y29 109 aa1.93□□□□□ -2.1
SNHG1-220ENST00000544550 TRBV7-7A0A0K0K1E9 115 aa1.92□□□□□ -2.1
SNHG1-220ENST00000544550 LST1O00453 97 aa1.92□□□□□ -2.1
SNHG1-220ENST00000544550 COX7BP24311 80 aa1.92□□□□□ -2.1
SNHG1-220ENST00000544550 IGLV5-48A0A075B6I7 105 aa1.91□□□□□ -2.1
SNHG1-220ENST00000544550 HSBP1L1C9JCN9 74 aa1.91□□□□□ -2.1
SNHG1-220ENST00000544550 MT-ND4LP03901 98 aa1.91□□□□□ -2.1
SNHG1-220ENST00000544550 SPRR2EP22531 72 aa1.91□□□□□ -2.1
SNHG1-220ENST00000544550 SPRR2BP35325 72 aa1.91□□□□□ -2.1
SNHG1-220ENST00000544550 SPRR2AP35326 72 aa1.91□□□□□ -2.1
SNHG1-220ENST00000544550 LCE3EQ5T5B0 92 aa1.91□□□□□ -2.1
SNHG1-220ENST00000544550 Q6JHZ5 121 aa1.91□□□□□ -2.1
SNHG1-220ENST00000544550 TCTE3Q8IZS6 198 aa1.91□□□□□ -2.1
SNHG1-220ENST00000544550 OR13C6PQ8NH95 151 aa1.91□□□□□ -2.1
SNHG1-220ENST00000544550 TRAV12-1A0A0B4J245 112 aa1.9□□□□□ -2.11
SNHG1-220ENST00000544550 TRBV7-6A0A0J9YX20 115 aa1.9□□□□□ -2.11
SNHG1-220ENST00000544550 C9JQL5 133 aa1.9□□□□□ -2.11
SNHG1-220ENST00000544550 CLEC2BQ92478 149 aa1.9□□□□□ -2.11
SNHG1-220ENST00000544550 SPANXDQ9BXN6 97 aa1.9□□□□□ -2.11
SNHG1-220ENST00000544550 NHP2Q9NX24 153 aaKnown RBP1.9□□□□□ -2.11
SNHG1-220ENST00000544550 SPANXCQ9NY87 97 aa1.9□□□□□ -2.11
SNHG1-220ENST00000544550 A0A096LNJ9 63 aa1.89□□□□□ -2.11
SNHG1-220ENST00000544550 LINC00614P0C842 121 aa1.89□□□□□ -2.11
SNHG1-220ENST00000544550 COX19Q49B96 90 aa1.89□□□□□ -2.11
SNHG1-220ENST00000544550 SOSTDC1Q6X4U4 206 aa1.89□□□□□ -2.11
SNHG1-220ENST00000544550 SS18L2Q9UHA2 77 aa1.89□□□□□ -2.11
SNHG1-220ENST00000544550 TRAV13-2A0A0B4J235 113 aa1.88□□□□□ -2.11
SNHG1-220ENST00000544550 LEPROTO15243 131 aa1.88□□□□□ -2.11
SNHG1-220ENST00000544550 Q5VV11 94 aa1.88□□□□□ -2.11
SNHG1-220ENST00000544550 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
SNHG1-220ENST00000544550 V9GYY9 64 aa1.88□□□□□ -2.11
SNHG1-220ENST00000544550 J3QQQ9 107 aa1.87□□□□□ -2.11
SNHG1-220ENST00000544550 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
SNHG1-220ENST00000544550 NPC2P61916 151 aa1.87□□□□□ -2.11
SNHG1-220ENST00000544550 IFI27L1Q96BM0 104 aa1.87□□□□□ -2.11
SNHG1-220ENST00000544550 SEC11CQ9BY50 192 aa1.87□□□□□ -2.11
SNHG1-220ENST00000544550 S100PP25815 95 aa1.86□□□□□ -2.11
SNHG1-220ENST00000544550 LINC00313P59037 77 aa1.86□□□□□ -2.11
SNHG1-220ENST00000544550 TSPEAR-AS2P59090 65 aa1.86□□□□□ -2.11
SNHG1-220ENST00000544550 KRTAP12-2P59991 146 aa1.86□□□□□ -2.11
SNHG1-220ENST00000544550 FABP9Q0Z7S8 132 aa1.86□□□□□ -2.11
SNHG1-220ENST00000544550 PMCHL1Q16048 86 aa1.86□□□□□ -2.11
SNHG1-220ENST00000544550 SLC7A5P1Q8MH63 180 aa1.86□□□□□ -2.11
SNHG1-220ENST00000544550 SPRR2DP22532 72 aa1.85□□□□□ -2.11
SNHG1-220ENST00000544550 PLNP26678 52 aa1.85□□□□□ -2.11
SNHG1-220ENST00000544550 OCIAD2Q56VL3 154 aa1.85□□□□□ -2.11
SNHG1-220ENST00000544550 LCE3AQ5TA76 89 aa1.85□□□□□ -2.11
SNHG1-220ENST00000544550 Q8N9L7 120 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms