RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 FAM30AQ9NZY2 134 aa9.64□□□□□ -0.87
CHFR-223ENST00000544268 TRAV22A0A0B4J277 110 aa9.63□□□□□ -0.87
CHFR-223ENST00000544268 SMIM29Q86T20 159 aa9.63□□□□□ -0.87
CHFR-223ENST00000544268 DEFB105AQ8NG35 78 aa9.63□□□□□ -0.87
CHFR-223ENST00000544268 ZCCHC13Q8WW36 166 aaKnown RBP9.63□□□□□ -0.87
CHFR-223ENST00000544268 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
CHFR-223ENST00000544268 VPS13DQ5THJ4 4388 aa9.61□□□□□ -0.87
CHFR-223ENST00000544268 NDUFS5O43920 106 aa9.61□□□□□ -0.87
CHFR-223ENST00000544268 UBE2BP63146 152 aa9.61□□□□□ -0.87
CHFR-223ENST00000544268 KRTAP7-1Q8IUC3 87 aa9.61□□□□□ -0.87
CHFR-223ENST00000544268 CYP4F30PQ9H0H9 118 aa9.6□□□□□ -0.87
CHFR-223ENST00000544268 C3orf84H3BNL1 204 aa9.6□□□□□ -0.87
CHFR-223ENST00000544268 PHF5AQ7RTV0 110 aaKnown RBP9.59□□□□□ -0.87
CHFR-223ENST00000544268 NKAPP1Q8N9T2 125 aa9.58□□□□□ -0.88
CHFR-223ENST00000544268 SRRM2Q9UQ35 2752 aaKnown RBP9.56□□□□□ -0.88
CHFR-223ENST00000544268 A0A1B0GW54 56 aa9.56□□□□□ -0.88
CHFR-223ENST00000544268 PSCAO43653 123 aa9.56□□□□□ -0.88
CHFR-223ENST00000544268 ETDCA0A1B0GVM5 59 aa9.55□□□□□ -0.88
CHFR-223ENST00000544268 KCNQ1DNQ9H478 68 aa9.55□□□□□ -0.88
CHFR-223ENST00000544268 ST20-AS1Q8NBB2 130 aa9.54□□□□□ -0.88
CHFR-223ENST00000544268 Q9BRP9 147 aa9.54□□□□□ -0.88
CHFR-223ENST00000544268 NBDYA0A0U1RRE5 68 aa9.54□□□□□ -0.88
CHFR-223ENST00000544268 C16orf90A8MZG2 172 aa9.54□□□□□ -0.88
CHFR-223ENST00000544268 Q8N377 158 aa9.54□□□□□ -0.88
CHFR-223ENST00000544268 KMT2AQ03164 3969 aa9.54□□□□□ -0.88
CHFR-223ENST00000544268 A8MUN3 132 aa9.53□□□□□ -0.88
CHFR-223ENST00000544268 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.53□□□□□ -0.88
CHFR-223ENST00000544268 A6NN06 94 aa9.53□□□□□ -0.88
CHFR-223ENST00000544268 IGLV5-48A0A075B6I7 105 aa9.52□□□□□ -0.89
CHFR-223ENST00000544268 WWC2-AS2Q96NR7 200 aa9.52□□□□□ -0.89
CHFR-223ENST00000544268 PRR26Q8N8Z3 221 aa9.52□□□□□ -0.89
CHFR-223ENST00000544268 Q5VV11 94 aa9.51□□□□□ -0.89
CHFR-223ENST00000544268 NDUFB1O75438 58 aa9.5□□□□□ -0.89
CHFR-223ENST00000544268 IGLV1-50A0A075B6I6 118 aa9.49□□□□□ -0.89
CHFR-223ENST00000544268 KRTAP4-16G5E9R7 235 aaPredicted RBP9.49□□□□□ -0.89
CHFR-223ENST00000544268 ATP11AUNQ6ZP68 121 aa9.48□□□□□ -0.89
CHFR-223ENST00000544268 A0A0G2JQZ4 141 aa9.48□□□□□ -0.89
CHFR-223ENST00000544268 A0A1W2PNN7 141 aa9.48□□□□□ -0.89
CHFR-223ENST00000544268 TLX1NBP0CAT3 122 aa9.48□□□□□ -0.89
CHFR-223ENST00000544268 Q6ZRX8 168 aa9.48□□□□□ -0.89
CHFR-223ENST00000544268 PRR4Q16378 134 aa9.47□□□□□ -0.89
CHFR-223ENST00000544268 UBE2AP49459 152 aa9.47□□□□□ -0.89
CHFR-223ENST00000544268 IGKV2-24A0A0C4DH68 120 aa9.46□□□□□ -0.89
CHFR-223ENST00000544268 LCA10Q71F78 164 aa9.46□□□□□ -0.89
CHFR-223ENST00000544268 SPTSSBQ8NFR3 76 aa9.46□□□□□ -0.89
CHFR-223ENST00000544268 A0A1W2PNM2 257 aa9.46□□□□□ -0.9
CHFR-223ENST00000544268 DSCR10P59022 87 aa9.46□□□□□ -0.9
CHFR-223ENST00000544268 C7orf65Q6ZTY9 151 aa9.45□□□□□ -0.9
CHFR-223ENST00000544268 Q6ZRN7 208 aaPredicted RBP9.45□□□□□ -0.9
CHFR-223ENST00000544268 DNAH2Q9P225 4427 aa9.44□□□□□ -0.9
CHFR-223ENST00000544268 HCG22E2RYF7 251 aa9.43□□□□□ -0.9
CHFR-223ENST00000544268 A0A096LNI7 61 aa9.42□□□□□ -0.9
CHFR-223ENST00000544268 K7EQZ3 153 aa9.42□□□□□ -0.9
CHFR-223ENST00000544268 SPRR1AP35321 89 aa9.42□□□□□ -0.9
CHFR-223ENST00000544268 LIMD2Q9BT23 127 aa9.42□□□□□ -0.9
CHFR-223ENST00000544268 LY6G6CO95867 125 aa9.42□□□□□ -0.9
CHFR-223ENST00000544268 Q8NBF4 154 aa9.42□□□□□ -0.9
CHFR-223ENST00000544268 PLA2G2DQ9UNK4 145 aa9.42□□□□□ -0.9
CHFR-223ENST00000544268 CHKB-CPT1BH3BT56 60 aa9.41□□□□□ -0.9
CHFR-223ENST00000544268 Q6ZR54 194 aa9.41□□□□□ -0.9
CHFR-223ENST00000544268 C1orf137Q5JT78 98 aa9.41□□□□□ -0.9
CHFR-223ENST00000544268 SPRR4Q96PI1 79 aa9.41□□□□□ -0.9
CHFR-223ENST00000544268 IGLV5-37A0A075B6J1 123 aa9.4□□□□□ -0.9
CHFR-223ENST00000544268 CHTF8P0CG12 524 aa9.4□□□□□ -0.9
CHFR-223ENST00000544268 Q8N9P0 234 aaPredicted RBP9.4□□□□□ -0.9
CHFR-223ENST00000544268 PRLHP81277 87 aa9.4□□□□□ -0.91
CHFR-223ENST00000544268 TNP2Q05952 138 aa9.39□□□□□ -0.91
CHFR-223ENST00000544268 KRTAP11-1Q8IUC1 163 aa9.39□□□□□ -0.91
CHFR-223ENST00000544268 MP68P56378 58 aa9.39□□□□□ -0.91
CHFR-223ENST00000544268 CNBPP62633 177 aaKnown RBP9.39□□□□□ -0.91
CHFR-223ENST00000544268 LINC00476Q8WZB0 136 aa9.39□□□□□ -0.91
CHFR-223ENST00000544268 DHRS4-AS1Q9P1J3 65 aa9.39□□□□□ -0.91
CHFR-223ENST00000544268 C14orf177Q52M58 125 aa9.38□□□□□ -0.91
CHFR-223ENST00000544268 DNAH6Q9C0G6 4158 aa9.38□□□□□ -0.91
CHFR-223ENST00000544268 ALMS1Q8TCU4 4167 aa9.37□□□□□ -0.91
CHFR-223ENST00000544268 SPANXA2-OT1Q8N9U9 137 aa9.37□□□□□ -0.91
CHFR-223ENST00000544268 REG3GQ6UW15 175 aa9.36□□□□□ -0.91
CHFR-223ENST00000544268 LINC00208Q96KT6 92 aa9.35□□□□□ -0.91
CHFR-223ENST00000544268 PRR15LQ9BU68 103 aa9.34□□□□□ -0.91
CHFR-223ENST00000544268 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
CHFR-223ENST00000544268 Q75L30 129 aa9.32□□□□□ -0.92
CHFR-223ENST00000544268 A0A087WTM6 91 aa9.32□□□□□ -0.92
CHFR-223ENST00000544268 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
CHFR-223ENST00000544268 DNAH17Q9UFH2 4485 aa9.31□□□□□ -0.92
CHFR-223ENST00000544268 DEFB116Q30KQ4 102 aa9.31□□□□□ -0.92
CHFR-223ENST00000544268 HECTD4Q9Y4D8 3996 aa9.31□□□□□ -0.92
CHFR-223ENST00000544268 H3BPC8 53 aa9.3□□□□□ -0.92
CHFR-223ENST00000544268 FRAS1Q86XX4 4008 aa9.29□□□□□ -0.92
CHFR-223ENST00000544268 LOC101927531A0A1B0GV80 90 aa9.29□□□□□ -0.92
CHFR-223ENST00000544268 PANO1I0J062 215 aa9.29□□□□□ -0.92
CHFR-223ENST00000544268 C9orf163Q8N9P6 203 aa9.29□□□□□ -0.92
CHFR-223ENST00000544268 WFDC13Q8IUB5 93 aa9.27□□□□□ -0.92
CHFR-223ENST00000544268 A6NED7 52 aa9.27□□□□□ -0.93
CHFR-223ENST00000544268 SACSQ9NZJ4 4579 aa9.26□□□□□ -0.93
CHFR-223ENST00000544268 CDC42SE1Q9NRR8 79 aa9.26□□□□□ -0.93
CHFR-223ENST00000544268 MOBPQ13875 183 aa9.25□□□□□ -0.93
CHFR-223ENST00000544268 IGFL1Q6UW32 110 aa9.25□□□□□ -0.93
CHFR-223ENST00000544268 H0Y9P7 68 aa9.24□□□□□ -0.93
CHFR-223ENST00000544268 KRTAP29-1A8MX34 341 aaPredicted RBP9.23□□□□□ -0.93
CHFR-223ENST00000544268 LINC01554Q52M75 96 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms