RNA–Protein interactions for RNA: ENST00000543824.5

PHC1-212, Transcript of polyhomeotic homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC1, Length 4,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-212ENST00000543824 KTN1-AS1Q86SY8 53 aa11.75□□□□□ -0.53
PHC1-212ENST00000543824 ACYP2P14621 99 aa11.75□□□□□ -0.53
PHC1-212ENST00000543824 IGKV2D-30A0A075B6S6 120 aa11.74□□□□□ -0.53
PHC1-212ENST00000543824 IGKV2-30P06310 120 aa11.74□□□□□ -0.53
PHC1-212ENST00000543824 SMG1Q96Q15 3661 aaKnown RBP11.73□□□□□ -0.53
PHC1-212ENST00000543824 K7ERS5 55 aa11.72□□□□□ -0.53
PHC1-212ENST00000543824 DCHS2Q6V1P9 2916 aa11.72□□□□□ -0.53
PHC1-212ENST00000543824 HRNRQ86YZ3 2850 aaPredicted RBP11.71□□□□□ -0.54
PHC1-212ENST00000543824 IGLV8-61A0A075B6I0 122 aa11.71□□□□□ -0.54
PHC1-212ENST00000543824 SPRR4Q96PI1 79 aa11.69□□□□□ -0.54
PHC1-212ENST00000543824 TLX1NBP0CAT3 122 aa11.69□□□□□ -0.54
PHC1-212ENST00000543824 NBEAL1Q6ZS30 2694 aa11.68□□□□□ -0.54
PHC1-212ENST00000543824 CELSR2Q9HCU4 2923 aa11.68□□□□□ -0.54
PHC1-212ENST00000543824 KRTAP1-3Q8IUG1 177 aa11.68□□□□□ -0.54
PHC1-212ENST00000543824 FBN2P35556 2912 aa11.67□□□□□ -0.54
PHC1-212ENST00000543824 SPANXA2-OT1Q8N9U9 137 aa11.67□□□□□ -0.54
PHC1-212ENST00000543824 NF1P21359 2839 aa11.67□□□□□ -0.54
PHC1-212ENST00000543824 PLA2G2DQ9UNK4 145 aa11.66□□□□□ -0.54
PHC1-212ENST00000543824 MRPL34Q9BQ48 92 aaKnown RBP11.66□□□□□ -0.54
PHC1-212ENST00000543824 C8orf17Q9NRJ1 99 aa11.65□□□□□ -0.54
PHC1-212ENST00000543824 CSMD1Q96PZ7 3565 aa11.65□□□□□ -0.55
PHC1-212ENST00000543824 C7orf65Q6ZTY9 151 aa11.63□□□□□ -0.55
PHC1-212ENST00000543824 ITPR2Q14571 2701 aa11.62□□□□□ -0.55
PHC1-212ENST00000543824 C8orf87E5RJ46 101 aa11.62□□□□□ -0.55
PHC1-212ENST00000543824 Q8N9P0 234 aaPredicted RBP11.61□□□□□ -0.55
PHC1-212ENST00000543824 IGLV5-52A0A0A0MRZ9 124 aa11.6□□□□□ -0.55
PHC1-212ENST00000543824 KRTAP10-11P60412 298 aa11.59□□□□□ -0.55
PHC1-212ENST00000543824 PRR26Q8N8Z3 221 aa11.58□□□□□ -0.56
PHC1-212ENST00000543824 CDC42SE1Q9NRR8 79 aa11.58□□□□□ -0.56
PHC1-212ENST00000543824 KRTAP1-1Q07627 177 aa11.56□□□□□ -0.56
PHC1-212ENST00000543824 Q5VV11 94 aa11.56□□□□□ -0.56
PHC1-212ENST00000543824 LY6G6CO95867 125 aa11.56□□□□□ -0.56
PHC1-212ENST00000543824 ANAPC11Q9NYG5 84 aa11.56□□□□□ -0.56
PHC1-212ENST00000543824 RBM12B-AS1Q9P1G2 102 aa11.55□□□□□ -0.56
PHC1-212ENST00000543824 SVEP1Q4LDE5 3571 aa11.55□□□□□ -0.56
PHC1-212ENST00000543824 A0A1B0GVX0 72 aa11.55□□□□□ -0.56
PHC1-212ENST00000543824 STAB1Q9NY15 2570 aa11.54□□□□□ -0.56
PHC1-212ENST00000543824 APCP25054 2843 aa11.54□□□□□ -0.56
PHC1-212ENST00000543824 MDFIQ99750 246 aa11.53□□□□□ -0.56
PHC1-212ENST00000543824 IGLV5-37A0A075B6J1 123 aa11.52□□□□□ -0.56
PHC1-212ENST00000543824 SPACA4Q8TDM5 124 aa11.52□□□□□ -0.57
PHC1-212ENST00000543824 HIVEP1P15822 2718 aa11.52□□□□□ -0.57
PHC1-212ENST00000543824 NUPR2A6NF83 97 aa11.52□□□□□ -0.57
PHC1-212ENST00000543824 LCA10Q71F78 164 aa11.52□□□□□ -0.57
PHC1-212ENST00000543824 CNBPP62633 177 aaKnown RBP11.51□□□□□ -0.57
PHC1-212ENST00000543824 LINC00313P59037 77 aa11.51□□□□□ -0.57
PHC1-212ENST00000543824 KRTAP24-1Q3LI83 254 aa11.5□□□□□ -0.57
PHC1-212ENST00000543824 UQCR11O14957 56 aa11.49□□□□□ -0.57
PHC1-212ENST00000543824 IGLV7-46A0A075B6I9 117 aa11.48□□□□□ -0.57
PHC1-212ENST00000543824 SPRR1AP35321 89 aa11.47□□□□□ -0.57
PHC1-212ENST00000543824 NSD1Q96L73 2696 aaPredicted RBP11.47□□□□□ -0.57
PHC1-212ENST00000543824 Q75L30 129 aa11.46□□□□□ -0.58
PHC1-212ENST00000543824 CELSR1Q9NYQ6 3014 aa11.46□□□□□ -0.58
PHC1-212ENST00000543824 CUBNO60494 3623 aa11.46□□□□□ -0.58
PHC1-212ENST00000543824 NBDYA0A0U1RRE5 68 aa11.45□□□□□ -0.58
PHC1-212ENST00000543824 MIR22HGQ0VDD5 57 aa11.44□□□□□ -0.58
PHC1-212ENST00000543824 FAM229AH3BQW9 127 aa11.43□□□□□ -0.58
PHC1-212ENST00000543824 C9orf163Q8N9P6 203 aa11.42□□□□□ -0.58
PHC1-212ENST00000543824 KRTAP26-1Q6PEX3 210 aa11.42□□□□□ -0.58
PHC1-212ENST00000543824 TNP2Q05952 138 aa11.4□□□□□ -0.59
PHC1-212ENST00000543824 MXRA5Q9NR99 2828 aa11.4□□□□□ -0.59
PHC1-212ENST00000543824 RTL8CO15255 209 aa11.39□□□□□ -0.59
PHC1-212ENST00000543824 MMP24-AS1A0A0U1RRL7 71 aa11.38□□□□□ -0.59
PHC1-212ENST00000543824 C1orf134Q5TEV5 83 aa11.38□□□□□ -0.59
PHC1-212ENST00000543824 ZCCHC13Q8WW36 166 aaKnown RBP11.36□□□□□ -0.59
PHC1-212ENST00000543824 PRAC1Q96KF2 57 aa11.36□□□□□ -0.59
PHC1-212ENST00000543824 SPINK7P58062 85 aa11.35□□□□□ -0.59
PHC1-212ENST00000543824 LINC01558Q9Y6Z2 57 aa11.34□□□□□ -0.59
PHC1-212ENST00000543824 NIPBLQ6KC79 2804 aaeCLIP11.33□□□□□ -0.6
PHC1-212ENST00000543824 LINC00472Q9H8W2 130 aa11.33□□□□□ -0.6
PHC1-212ENST00000543824 STAB2Q8WWQ8 2551 aa11.32□□□□□ -0.6
PHC1-212ENST00000543824 ZNF861PO60384 105 aa11.31□□□□□ -0.6
PHC1-212ENST00000543824 A8MU10 97 aa11.31□□□□□ -0.6
PHC1-212ENST00000543824 K7EIL1 84 aa11.3□□□□□ -0.6
PHC1-212ENST00000543824 HRES1P13985 223 aa11.3□□□□□ -0.6
PHC1-212ENST00000543824 PSORS1C2Q9UIG4 136 aa11.29□□□□□ -0.6
PHC1-212ENST00000543824 KRTAP4-16G5E9R7 235 aaPredicted RBP11.28□□□□□ -0.6
PHC1-212ENST00000543824 Q96NJ1 140 aa11.28□□□□□ -0.6
PHC1-212ENST00000543824 SPENQ96T58 3664 aaKnown RBP11.27□□□□□ -0.61
PHC1-212ENST00000543824 KRTAP29-1A8MX34 341 aaPredicted RBP11.22□□□□□ -0.61
PHC1-212ENST00000543824 SSBP3-AS1Q7Z2R9 100 aa11.18□□□□□ -0.62
PHC1-212ENST00000543824 LCE6AA0A183 80 aa11.17□□□□□ -0.62
PHC1-212ENST00000543824 A0A087WTM6 91 aa11.16□□□□□ -0.62
PHC1-212ENST00000543824 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.16□□□□□ -0.62
PHC1-212ENST00000543824 LINC01554Q52M75 96 aa11.16□□□□□ -0.62
PHC1-212ENST00000543824 Q8N1X5 172 aa11.16□□□□□ -0.62
PHC1-212ENST00000543824 TYMSOSQ8TAI1 123 aa11.15□□□□□ -0.62
PHC1-212ENST00000543824 DMBT1Q9UGM3 2413 aaPredicted RBP11.15□□□□□ -0.62
PHC1-212ENST00000543824 SPRR1BP22528 89 aa11.14□□□□□ -0.63
PHC1-212ENST00000543824 KRTAP1-5Q9BYS1 174 aa11.11□□□□□ -0.63
PHC1-212ENST00000543824 APLNQ9ULZ1 77 aa11.1□□□□□ -0.63
PHC1-212ENST00000543824 IGLV7-43P04211 117 aa11.1□□□□□ -0.63
PHC1-212ENST00000543824 PLA2G1BP04054 148 aaKnown RBP11.09□□□□□ -0.63
PHC1-212ENST00000543824 SPINT4Q6UDR6 99 aa11.07□□□□□ -0.64
PHC1-212ENST00000543824 KRTAP7-1Q8IUC3 87 aa11.06□□□□□ -0.64
PHC1-212ENST00000543824 CSMD2Q7Z408 3487 aa11.06□□□□□ -0.64
PHC1-212ENST00000543824 H3BS24 57 aa11.03□□□□□ -0.64
PHC1-212ENST00000543824 CSAG1Q6PB30 78 aa11.01□□□□□ -0.65
PHC1-212ENST00000543824 A6NN06 94 aa10.98□□□□□ -0.65
PHC1-212ENST00000543824 Q5W150 140 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms