RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 ATP11AUNQ6ZP68 121 aa11.79□□□□□ -0.52
CDKN3-207ENST00000543789 PCP2Q8IVA1 136 aa11.79□□□□□ -0.52
CDKN3-207ENST00000543789 MUSTN1Q8IVN3 82 aa11.79□□□□□ -0.52
CDKN3-207ENST00000543789 SMIM11BQ8TCY0 68 aa11.78□□□□□ -0.52
CDKN3-207ENST00000543789 TRAV13-2A0A0B4J235 113 aa11.77□□□□□ -0.53
CDKN3-207ENST00000543789 HIST1H2BLQ99880 126 aa11.77□□□□□ -0.53
CDKN3-207ENST00000543789 ANKRD39Q53RE8 183 aa11.76□□□□□ -0.53
CDKN3-207ENST00000543789 Q75L30 129 aa11.75□□□□□ -0.53
CDKN3-207ENST00000543789 OBSCN-AS1Q96MR7 158 aa11.75□□□□□ -0.53
CDKN3-207ENST00000543789 SNRPEP62304 92 aaKnown RBP11.73□□□□□ -0.53
CDKN3-207ENST00000543789 Q6JHZ5 121 aa11.73□□□□□ -0.53
CDKN3-207ENST00000543789 TRBV7-7A0A0K0K1E9 115 aa11.72□□□□□ -0.53
CDKN3-207ENST00000543789 VAMP3Q15836 100 aa11.72□□□□□ -0.53
CDKN3-207ENST00000543789 LINC00575Q6W349 94 aa11.7□□□□□ -0.54
CDKN3-207ENST00000543789 CLEC2BQ92478 149 aa11.7□□□□□ -0.54
CDKN3-207ENST00000543789 HSBP1L1C9JCN9 74 aa11.69□□□□□ -0.54
CDKN3-207ENST00000543789 IGFL1Q6UW32 110 aa11.69□□□□□ -0.54
CDKN3-207ENST00000543789 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.67□□□□□ -0.54
CDKN3-207ENST00000543789 Q6ZQY7 126 aa11.67□□□□□ -0.54
CDKN3-207ENST00000543789 hADV29S1A0JD25 119 aa11.66□□□□□ -0.54
CDKN3-207ENST00000543789 KRTAP9-7A8MTY7 169 aa11.66□□□□□ -0.54
CDKN3-207ENST00000543789 CFC1P0CG37 223 aa11.66□□□□□ -0.54
CDKN3-207ENST00000543789 OCIAD2Q56VL3 154 aa11.66□□□□□ -0.54
CDKN3-207ENST00000543789 SCGB1D1O95968 90 aa11.63□□□□□ -0.55
CDKN3-207ENST00000543789 Q96NJ1 140 aa11.62□□□□□ -0.55
CDKN3-207ENST00000543789 KRTAP9-8Q9BYQ0 159 aa11.62□□□□□ -0.55
CDKN3-207ENST00000543789 LST1O00453 97 aa11.6□□□□□ -0.55
CDKN3-207ENST00000543789 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.56□□□□□ -0.56
CDKN3-207ENST00000543789 SNHG12Q9BXW3 62 aa11.55□□□□□ -0.56
CDKN3-207ENST00000543789 TRBV20-1A0A075B6N2 111 aa11.54□□□□□ -0.56
CDKN3-207ENST00000543789 PPDPFLQ8WWR9 84 aa11.54□□□□□ -0.56
CDKN3-207ENST00000543789 C20orf166-AS1Q96NR2 134 aa11.54□□□□□ -0.56
CDKN3-207ENST00000543789 USH2AO75445 5202 aa11.51□□□□□ -0.57
CDKN3-207ENST00000543789 H3BUT2 72 aa11.51□□□□□ -0.57
CDKN3-207ENST00000543789 A8MUU9 505 aa11.5□□□□□ -0.57
CDKN3-207ENST00000543789 SS18L2Q9UHA2 77 aa11.49□□□□□ -0.57
CDKN3-207ENST00000543789 SSPOA2VEC9 5147 aa11.48□□□□□ -0.57
CDKN3-207ENST00000543789 BVES-AS1Q5T3Y7 98 aa11.47□□□□□ -0.57
CDKN3-207ENST00000543789 COX8AP10176 69 aa11.46□□□□□ -0.57
CDKN3-207ENST00000543789 HIST1H4GQ99525 98 aa11.43□□□□□ -0.58
CDKN3-207ENST00000543789 PAM16Q9Y3D7 125 aa11.43□□□□□ -0.58
CDKN3-207ENST00000543789 DLEU1O43261 78 aa11.42□□□□□ -0.58
CDKN3-207ENST00000543789 SPATA45Q537H7 98 aa11.41□□□□□ -0.58
CDKN3-207ENST00000543789 TEN1Q86WV5 123 aa11.41□□□□□ -0.58
CDKN3-207ENST00000543789 C14orf144Q96I85 54 aa11.41□□□□□ -0.58
CDKN3-207ENST00000543789 VAMP8Q9BV40 100 aa11.41□□□□□ -0.58
CDKN3-207ENST00000543789 C12orf57Q99622 126 aa11.4□□□□□ -0.58
CDKN3-207ENST00000543789 MT2AP02795 61 aa11.39□□□□□ -0.59
CDKN3-207ENST00000543789 A0A087WSZ3 146 aa11.37□□□□□ -0.59
CDKN3-207ENST00000543789 DSCR10P59022 87 aa11.36□□□□□ -0.59
CDKN3-207ENST00000543789 FAM236DA0A1B0GTK5 79 aa11.35□□□□□ -0.59
CDKN3-207ENST00000543789 SNCGO76070 127 aa11.35□□□□□ -0.59
CDKN3-207ENST00000543789 FAM236CP0DP71 79 aa11.35□□□□□ -0.59
CDKN3-207ENST00000543789 NDUFV3P56181 108 aaKnown RBP11.34□□□□□ -0.59
CDKN3-207ENST00000543789 TMA7Q9Y2S6 64 aaKnown RBP11.34□□□□□ -0.59
CDKN3-207ENST00000543789 HIGD1BQ9P298 99 aa11.33□□□□□ -0.6
CDKN3-207ENST00000543789 FCGBPQ9Y6R7 5405 aaPredicted RBP11.33□□□□□ -0.6
CDKN3-207ENST00000543789 KRTAP19-1Q8IUB9 90 aa11.32□□□□□ -0.6
CDKN3-207ENST00000543789 KRTAP16-1A8MUX0 517 aa11.31□□□□□ -0.6
CDKN3-207ENST00000543789 LCE2BO14633 110 aa11.31□□□□□ -0.6
CDKN3-207ENST00000543789 MT1FP04733 61 aa11.31□□□□□ -0.6
CDKN3-207ENST00000543789 LINC00313P59037 77 aa11.28□□□□□ -0.6
CDKN3-207ENST00000543789 KRTAP9-3Q9BYQ3 159 aa11.28□□□□□ -0.6
CDKN3-207ENST00000543789 H0YGX0 51 aa11.27□□□□□ -0.61
CDKN3-207ENST00000543789 H3BMG7 143 aa11.27□□□□□ -0.61
CDKN3-207ENST00000543789 KRTAP10-10P60014 251 aa11.27□□□□□ -0.61
CDKN3-207ENST00000543789 PYY3Q5JQD4 70 aa11.27□□□□□ -0.61
CDKN3-207ENST00000543789 C2orf91Q6ZV80 131 aa11.27□□□□□ -0.61
CDKN3-207ENST00000543789 RAB37Q96AX2 223 aa11.27□□□□□ -0.61
CDKN3-207ENST00000543789 RBM12B-AS1Q9P1G2 102 aa11.27□□□□□ -0.61
CDKN3-207ENST00000543789 SIGMAR1Q99720 223 aa11.26□□□□□ -0.61
CDKN3-207ENST00000543789 FAM218AQ96MZ4 157 aa11.25□□□□□ -0.61
CDKN3-207ENST00000543789 MPLKIPQ8TAP9 179 aa11.24□□□□□ -0.61
CDKN3-207ENST00000543789 HRES1P13985 223 aa11.22□□□□□ -0.61
CDKN3-207ENST00000543789 CEND1Q8N111 149 aa11.22□□□□□ -0.61
CDKN3-207ENST00000543789 A0A0B4J2C4 111 aa11.21□□□□□ -0.61
CDKN3-207ENST00000543789 TMEM238LA0A1B0GVL6 79 aa11.21□□□□□ -0.61
CDKN3-207ENST00000543789 A0A1W2PNM2 257 aa11.21□□□□□ -0.61
CDKN3-207ENST00000543789 A6NJY4 79 aa11.21□□□□□ -0.61
CDKN3-207ENST00000543789 GHRHP01286 108 aa11.21□□□□□ -0.61
CDKN3-207ENST00000543789 FABP2P12104 132 aa11.2□□□□□ -0.62
CDKN3-207ENST00000543789 IGKV4-1P06312 121 aa11.19□□□□□ -0.62
CDKN3-207ENST00000543789 NOTCH2NLQ7Z3S9 236 aa11.16□□□□□ -0.62
CDKN3-207ENST00000543789 A0A1B0GX51 115 aa11.15□□□□□ -0.62
CDKN3-207ENST00000543789 PRO1854Q9UHT4 67 aa11.15□□□□□ -0.62
CDKN3-207ENST00000543789 FXYD2P54710 66 aa11.14□□□□□ -0.63
CDKN3-207ENST00000543789 HSD52Q0P140 79 aa11.13□□□□□ -0.63
CDKN3-207ENST00000543789 UQCR10Q9UDW1 63 aa11.12□□□□□ -0.63
CDKN3-207ENST00000543789 TRBV7-4A0A0J9YYF1 115 aa11.11□□□□□ -0.63
CDKN3-207ENST00000543789 ANKRD29Q8N6D5 301 aa11.11□□□□□ -0.63
CDKN3-207ENST00000543789 DEFB116Q30KQ4 102 aa11.09□□□□□ -0.63
CDKN3-207ENST00000543789 LINC00846Q9NV44 126 aa11.09□□□□□ -0.63
CDKN3-207ENST00000543789 IGHV6-1A0A0B4J1U7 121 aa11.07□□□□□ -0.64
CDKN3-207ENST00000543789 MTURNQ8N3F0 131 aa11.07□□□□□ -0.64
CDKN3-207ENST00000543789 LINC00472Q9H8W2 130 aa11.07□□□□□ -0.64
CDKN3-207ENST00000543789 MACF1Q9UPN3 7388 aaKnown RBP11.05□□□□□ -0.64
CDKN3-207ENST00000543789 SYNE2Q8WXH0 6885 aaKnown RBP11.04□□□□□ -0.64
CDKN3-207ENST00000543789 A0A1B0GV72 72 aa11.02□□□□□ -0.65
CDKN3-207ENST00000543789 TRIAP1O43715 76 aa11.02□□□□□ -0.65
CDKN3-207ENST00000543789 K7ERJ3 54 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms