RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 RHEBQ15382 184 aa1.39□□□□□ -2.19
CHD4-209ENST00000542717 PMCHL1Q16048 86 aa1.39□□□□□ -2.19
CHD4-209ENST00000542717 URB1-AS1Q96HZ7 61 aa1.39□□□□□ -2.19
CHD4-209ENST00000542717 KRTAP4-6Q9BYQ5 205 aa1.39□□□□□ -2.19
CHD4-209ENST00000542717 RPS10P5Q9NQ39 176 aa1.39□□□□□ -2.19
CHD4-209ENST00000542717 TRBV7-7A0A0K0K1E9 115 aa1.38□□□□□ -2.19
CHD4-209ENST00000542717 LEPROTO15243 131 aa1.38□□□□□ -2.19
CHD4-209ENST00000542717 EIF4EBP3O60516 100 aaPredicted RBP1.38□□□□□ -2.19
CHD4-209ENST00000542717 FABP9Q0Z7S8 132 aa1.38□□□□□ -2.19
CHD4-209ENST00000542717 COX19Q49B96 90 aa1.38□□□□□ -2.19
CHD4-209ENST00000542717 SOSTDC1Q6X4U4 206 aa1.38□□□□□ -2.19
CHD4-209ENST00000542717 OR13C6PQ8NH95 151 aa1.38□□□□□ -2.19
CHD4-209ENST00000542717 SEC11CQ9BY50 192 aa1.38□□□□□ -2.19
CHD4-209ENST00000542717 SPRR2GQ9BYE4 73 aa1.38□□□□□ -2.19
CHD4-209ENST00000542717 TRBV7-6A0A0J9YX20 115 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 F8WEM9 126 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 J3QQQ9 107 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 LST1O00453 97 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 S100PP25815 95 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 NMUP48645 174 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 NPC2P61916 151 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 ADAMTSL4-AS1Q5T5F5 129 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 C18orf32Q8TCD1 76 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 CLEC2BQ92478 149 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 IFI27L1Q96BM0 104 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 SPANXDQ9BXN6 97 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 KRTAP4-7Q9BYR0 210 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 SPANXCQ9NY87 97 aa1.37□□□□□ -2.19
CHD4-209ENST00000542717 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
CHD4-209ENST00000542717 A0A0J9YXY3 114 aa1.36□□□□□ -2.19
CHD4-209ENST00000542717 A0A1B0GWB2 263 aa1.36□□□□□ -2.19
CHD4-209ENST00000542717 SMCPP49901 116 aaPredicted RBP1.36□□□□□ -2.19
CHD4-209ENST00000542717 DSCR10P59022 87 aa1.36□□□□□ -2.19
CHD4-209ENST00000542717 HERVK_113P61574 105 aa1.36□□□□□ -2.19
CHD4-209ENST00000542717 Q6JHZ5 121 aa1.36□□□□□ -2.19
CHD4-209ENST00000542717 WFDC13Q8IUB5 93 aa1.36□□□□□ -2.19
CHD4-209ENST00000542717 LINC00518Q8N0U6 118 aa1.36□□□□□ -2.19
CHD4-209ENST00000542717 LINC00308Q8TCZ7 52 aa1.36□□□□□ -2.19
CHD4-209ENST00000542717 TRAV13-2A0A0B4J235 113 aa1.35□□□□□ -2.19
CHD4-209ENST00000542717 A4D1N5 150 aa1.35□□□□□ -2.19
CHD4-209ENST00000542717 ZNF815PA8K554 130 aa1.35□□□□□ -2.19
CHD4-209ENST00000542717 PLNP26678 52 aa1.35□□□□□ -2.19
CHD4-209ENST00000542717 SPINK7P58062 85 aa1.35□□□□□ -2.19
CHD4-209ENST00000542717 KRTAP12-2P59991 146 aa1.35□□□□□ -2.19
CHD4-209ENST00000542717 CHCHD1Q96BP2 118 aaKnown RBP1.35□□□□□ -2.19
CHD4-209ENST00000542717 LITAFQ99732 161 aa1.35□□□□□ -2.19
CHD4-209ENST00000542717 NHP2Q9NX24 153 aaKnown RBP1.35□□□□□ -2.19
CHD4-209ENST00000542717 TRAPPC1Q9Y5R8 145 aa1.35□□□□□ -2.19
CHD4-209ENST00000542717 MUC5ACP98088 5654 aa1.35□□□□□ -2.19
CHD4-209ENST00000542717 hCG_2014768A0A024R1R8 64 aa1.34□□□□□ -2.19
CHD4-209ENST00000542717 H0Y8G0 127 aa1.34□□□□□ -2.19
CHD4-209ENST00000542717 TIMM17BO60830 172 aa1.34□□□□□ -2.19
CHD4-209ENST00000542717 DPM2O94777 84 aa1.34□□□□□ -2.19
CHD4-209ENST00000542717 H1FX-AS1Q4G0G2 97 aa1.34□□□□□ -2.19
CHD4-209ENST00000542717 OCIAD2Q56VL3 154 aa1.34□□□□□ -2.19
CHD4-209ENST00000542717 SLC7A5P1Q8MH63 180 aa1.34□□□□□ -2.19
CHD4-209ENST00000542717 SS18L2Q9UHA2 77 aa1.34□□□□□ -2.19
CHD4-209ENST00000542717 TMEM218A2RU14 115 aa1.33□□□□□ -2.2
CHD4-209ENST00000542717 E9PLD3 99 aa1.33□□□□□ -2.2
CHD4-209ENST00000542717 IGKCP01834 107 aa1.33□□□□□ -2.2
CHD4-209ENST00000542717 LINC00313P59037 77 aa1.33□□□□□ -2.2
CHD4-209ENST00000542717 ANKRD39Q53RE8 183 aa1.33□□□□□ -2.2
CHD4-209ENST00000542717 A6NDN8 102 aa1.32□□□□□ -2.2
CHD4-209ENST00000542717 HSBP1O75506 76 aa1.32□□□□□ -2.2
CHD4-209ENST00000542717 SERF1AO75920 110 aa1.32□□□□□ -2.2
CHD4-209ENST00000542717 LEPROTL1O95214 131 aa1.32□□□□□ -2.2
CHD4-209ENST00000542717 SCGB1D1O95968 90 aa1.32□□□□□ -2.2
CHD4-209ENST00000542717 MT1XP80297 61 aa1.32□□□□□ -2.2
CHD4-209ENST00000542717 UQCC3Q6UW78 93 aa1.32□□□□□ -2.2
CHD4-209ENST00000542717 LINC00575Q6W349 94 aa1.32□□□□□ -2.2
CHD4-209ENST00000542717 Q6ZQY7 126 aa1.32□□□□□ -2.2
CHD4-209ENST00000542717 SMIM11BQ8TCY0 68 aa1.32□□□□□ -2.2
CHD4-209ENST00000542717 PMCHL2Q9BQD1 86 aa1.32□□□□□ -2.2
CHD4-209ENST00000542717 HSPB8Q9UJY1 196 aa1.32□□□□□ -2.2
CHD4-209ENST00000542717 A0A087WSZ3 146 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 hADV29S1A0JD25 119 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 COLCA2A8K830 154 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 H3BUT2 72 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 VAMP3Q15836 100 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 C5orf47Q569G3 176 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 KRTAP5-4Q6L8H1 288 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 LCA10Q71F78 164 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 TEN1Q86WV5 123 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 PPDPFLQ8WWR9 84 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 COPS9Q8WXC6 57 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 SIGMAR1Q99720 223 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 CYSTM1Q9H1C7 97 aa1.31□□□□□ -2.2
CHD4-209ENST00000542717 IFITM1P13164 125 aa1.3□□□□□ -2.2
CHD4-209ENST00000542717 KLKP1Q107X0 134 aa1.3□□□□□ -2.2
CHD4-209ENST00000542717 CLLU1Q5K131 121 aa1.3□□□□□ -2.2
CHD4-209ENST00000542717 LCE5AQ5TCM9 118 aa1.3□□□□□ -2.2
CHD4-209ENST00000542717 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.3□□□□□ -2.2
CHD4-209ENST00000542717 PRR15Q8IV56 129 aa1.3□□□□□ -2.2
CHD4-209ENST00000542717 SNHG12Q9BXW3 62 aa1.3□□□□□ -2.2
CHD4-209ENST00000542717 IGKV4-1P06312 121 aa1.29□□□□□ -2.2
CHD4-209ENST00000542717 C3orf79P0CE67 100 aa1.29□□□□□ -2.2
CHD4-209ENST00000542717 FABP4P15090 132 aa1.29□□□□□ -2.2
CHD4-209ENST00000542717 LINC00310P59036 64 aa1.29□□□□□ -2.2
CHD4-209ENST00000542717 SCGB1D4Q6XE38 83 aa1.29□□□□□ -2.2
CHD4-209ENST00000542717 MUSTN1Q8IVN3 82 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms