RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SPANXB1Q9NS25 103 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-214ENST00000540865 FAM236DA0A1B0GTK5 79 aa2.26□□□□□ -2.05
SNHG1-214ENST00000540865 NDUFC2O95298 119 aa2.26□□□□□ -2.05
SNHG1-214ENST00000540865 FAM236CP0DP71 79 aa2.26□□□□□ -2.05
SNHG1-214ENST00000540865 PEA15Q15121 130 aa2.26□□□□□ -2.05
SNHG1-214ENST00000540865 OBSCN-AS1Q96MR7 158 aa2.26□□□□□ -2.05
SNHG1-214ENST00000540865 CBY1Q9Y3M2 126 aa2.26□□□□□ -2.05
SNHG1-214ENST00000540865 TMEM223A0PJW6 202 aa2.25□□□□□ -2.05
SNHG1-214ENST00000540865 BAGE3Q86Y29 109 aa2.25□□□□□ -2.05
SNHG1-214ENST00000540865 PCP2Q8IVA1 136 aa2.25□□□□□ -2.05
SNHG1-214ENST00000540865 TEX49A0A1B0GTD5 131 aa2.24□□□□□ -2.05
SNHG1-214ENST00000540865 MYMXA0A1B0GTQ4 84 aa2.24□□□□□ -2.05
SNHG1-214ENST00000540865 HBDP02042 147 aa2.24□□□□□ -2.05
SNHG1-214ENST00000540865 MT-ND4LP03901 98 aa2.24□□□□□ -2.05
SNHG1-214ENST00000540865 KRTAP2-3P0C7H8 128 aa2.24□□□□□ -2.05
SNHG1-214ENST00000540865 TAL2Q16559 108 aa2.24□□□□□ -2.05
SNHG1-214ENST00000540865 COMMD7Q86VX2 200 aa2.24□□□□□ -2.05
SNHG1-214ENST00000540865 KRTAP2-4Q9BYR9 128 aa2.24□□□□□ -2.05
SNHG1-214ENST00000540865 SMCO4Q9NRQ5 59 aa2.24□□□□□ -2.05
SNHG1-214ENST00000540865 A0A096LNJ9 63 aa2.23□□□□□ -2.05
SNHG1-214ENST00000540865 A0A0G2JQZ4 141 aa2.23□□□□□ -2.05
SNHG1-214ENST00000540865 DEFB105AQ8NG35 78 aa2.23□□□□□ -2.05
SNHG1-214ENST00000540865 Q96NJ1 140 aa2.23□□□□□ -2.05
SNHG1-214ENST00000540865 MIEN1Q9BRT3 115 aa2.23□□□□□ -2.05
SNHG1-214ENST00000540865 RBM12B-AS1Q9P1G2 102 aa2.23□□□□□ -2.05
SNHG1-214ENST00000540865 A8MUU9 505 aa2.22□□□□□ -2.05
SNHG1-214ENST00000540865 IFITM2Q01629 132 aa2.22□□□□□ -2.05
SNHG1-214ENST00000540865 LCE3EQ5T5B0 92 aa2.22□□□□□ -2.05
SNHG1-214ENST00000540865 IGLV5-48A0A075B6I7 105 aa2.21□□□□□ -2.06
SNHG1-214ENST00000540865 TRAV12-1A0A0B4J245 112 aa2.21□□□□□ -2.06
SNHG1-214ENST00000540865 ELOF1P60002 83 aaKnown RBP2.21□□□□□ -2.06
SNHG1-214ENST00000540865 RHEBQ15382 184 aa2.21□□□□□ -2.06
SNHG1-214ENST00000540865 IGFL1Q6UW32 110 aa2.21□□□□□ -2.06
SNHG1-214ENST00000540865 A8MWP4 228 aa2.2□□□□□ -2.06
SNHG1-214ENST00000540865 LINC00614P0C842 121 aa2.2□□□□□ -2.06
SNHG1-214ENST00000540865 HRES1P13985 223 aa2.2□□□□□ -2.06
SNHG1-214ENST00000540865 COX7BP24311 80 aa2.2□□□□□ -2.06
SNHG1-214ENST00000540865 SOSTDC1Q6X4U4 206 aa2.2□□□□□ -2.06
SNHG1-214ENST00000540865 Q6ZVH6 145 aa2.2□□□□□ -2.06
SNHG1-214ENST00000540865 NMUP48645 174 aa2.19□□□□□ -2.06
SNHG1-214ENST00000540865 TSPEAR-AS2P59090 65 aa2.19□□□□□ -2.06
SNHG1-214ENST00000540865 FABP9Q0Z7S8 132 aa2.19□□□□□ -2.06
SNHG1-214ENST00000540865 PMCHL1Q16048 86 aa2.19□□□□□ -2.06
SNHG1-214ENST00000540865 COX19Q49B96 90 aa2.19□□□□□ -2.06
SNHG1-214ENST00000540865 OR13C6PQ8NH95 151 aa2.19□□□□□ -2.06
SNHG1-214ENST00000540865 TRBV7-6A0A0J9YX20 115 aa2.18□□□□□ -2.06
SNHG1-214ENST00000540865 TRBV7-7A0A0K0K1E9 115 aa2.18□□□□□ -2.06
SNHG1-214ENST00000540865 A6NN06 94 aa2.18□□□□□ -2.06
SNHG1-214ENST00000540865 LEPROTO15243 131 aa2.18□□□□□ -2.06
SNHG1-214ENST00000540865 CXCL6P80162 114 aa2.18□□□□□ -2.06
SNHG1-214ENST00000540865 MTURNQ8N3F0 131 aa2.18□□□□□ -2.06
SNHG1-214ENST00000540865 SPANXDQ9BXN6 97 aa2.18□□□□□ -2.06
SNHG1-214ENST00000540865 SEC11CQ9BY50 192 aa2.18□□□□□ -2.06
SNHG1-214ENST00000540865 SPANXCQ9NY87 97 aa2.18□□□□□ -2.06
SNHG1-214ENST00000540865 A0A1B0GWB2 263 aa2.17□□□□□ -2.06
SNHG1-214ENST00000540865 F8WEM9 126 aa2.17□□□□□ -2.06
SNHG1-214ENST00000540865 J3QQQ9 107 aa2.17□□□□□ -2.06
SNHG1-214ENST00000540865 LST1O00453 97 aa2.17□□□□□ -2.06
SNHG1-214ENST00000540865 NPC2P61916 151 aa2.17□□□□□ -2.06
SNHG1-214ENST00000540865 Q6JHZ5 121 aa2.17□□□□□ -2.06
SNHG1-214ENST00000540865 C18orf32Q8TCD1 76 aa2.17□□□□□ -2.06
SNHG1-214ENST00000540865 IFI27L1Q96BM0 104 aa2.17□□□□□ -2.06
SNHG1-214ENST00000540865 ZNF815PA8K554 130 aa2.16□□□□□ -2.06
SNHG1-214ENST00000540865 A8MU10 97 aa2.16□□□□□ -2.06
SNHG1-214ENST00000540865 E9PLD3 99 aa2.16□□□□□ -2.06
SNHG1-214ENST00000540865 S100PP25815 95 aa2.16□□□□□ -2.06
SNHG1-214ENST00000540865 CLEC2BQ92478 149 aa2.16□□□□□ -2.06
SNHG1-214ENST00000540865 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
SNHG1-214ENST00000540865 A0A0J9YXY3 114 aa2.15□□□□□ -2.07
SNHG1-214ENST00000540865 HERVK_113P61574 105 aa2.15□□□□□ -2.07
SNHG1-214ENST00000540865 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
SNHG1-214ENST00000540865 LINC00308Q8TCZ7 52 aa2.15□□□□□ -2.07
SNHG1-214ENST00000540865 NHP2Q9NX24 153 aaKnown RBP2.15□□□□□ -2.07
SNHG1-214ENST00000540865 TRAV13-2A0A0B4J235 113 aa2.14□□□□□ -2.07
SNHG1-214ENST00000540865 PLNP26678 52 aa2.14□□□□□ -2.07
SNHG1-214ENST00000540865 TIMM17BO60830 172 aa2.13□□□□□ -2.07
SNHG1-214ENST00000540865 KRTAP12-2P59991 146 aa2.13□□□□□ -2.07
SNHG1-214ENST00000540865 OCIAD2Q56VL3 154 aa2.13□□□□□ -2.07
SNHG1-214ENST00000540865 CHCHD1Q96BP2 118 aaKnown RBP2.13□□□□□ -2.07
SNHG1-214ENST00000540865 SS18L2Q9UHA2 77 aa2.13□□□□□ -2.07
SNHG1-214ENST00000540865 TRAPPC1Q9Y5R8 145 aa2.13□□□□□ -2.07
SNHG1-214ENST00000540865 SERF1AO75920 110 aa2.12□□□□□ -2.07
SNHG1-214ENST00000540865 DPM2O94777 84 aa2.12□□□□□ -2.07
SNHG1-214ENST00000540865 SLC7A5P1Q8MH63 180 aa2.12□□□□□ -2.07
SNHG1-214ENST00000540865 DSTQ03001 7570 aaKnown RBP2.11□□□□□ -2.07
SNHG1-214ENST00000540865 H0Y8G0 127 aa2.11□□□□□ -2.07
SNHG1-214ENST00000540865 LINC00313P59037 77 aa2.11□□□□□ -2.07
SNHG1-214ENST00000540865 CEND1Q8N111 149 aa2.11□□□□□ -2.07
SNHG1-214ENST00000540865 IGKCP01834 107 aa2.1□□□□□ -2.07
SNHG1-214ENST00000540865 MT1BP07438 61 aa2.1□□□□□ -2.07
SNHG1-214ENST00000540865 SPRR2EP22531 72 aa2.1□□□□□ -2.07
SNHG1-214ENST00000540865 SPRR2BP35325 72 aa2.1□□□□□ -2.07
SNHG1-214ENST00000540865 SPRR2AP35326 72 aa2.1□□□□□ -2.07
SNHG1-214ENST00000540865 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
SNHG1-214ENST00000540865 TMEM218A2RU14 115 aa2.09□□□□□ -2.07
SNHG1-214ENST00000540865 A6NDN8 102 aa2.09□□□□□ -2.07
SNHG1-214ENST00000540865 COLCA2A8K830 154 aa2.09□□□□□ -2.07
SNHG1-214ENST00000540865 HSBP1O75506 76 aa2.09□□□□□ -2.07
SNHG1-214ENST00000540865 LEPROTL1O95214 131 aa2.09□□□□□ -2.07
SNHG1-214ENST00000540865 SPINK7P58062 85 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms