RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 IGFL1Q6UW32 110 aa8.6□□□□□ -1.03
BNIP3-202ENST00000540159 DSCR10P59022 87 aa8.6□□□□□ -1.03
BNIP3-202ENST00000540159 LRCOL1A6NCL2 159 aa8.59□□□□□ -1.03
BNIP3-202ENST00000540159 IGLV5-37A0A075B6J1 123 aa8.59□□□□□ -1.03
BNIP3-202ENST00000540159 PANO1I0J062 215 aa8.58□□□□□ -1.04
BNIP3-202ENST00000540159 C16orf90A8MZG2 172 aa8.57□□□□□ -1.04
BNIP3-202ENST00000540159 UBE2AP49459 152 aa8.57□□□□□ -1.04
BNIP3-202ENST00000540159 MPLKIPQ8TAP9 179 aa8.56□□□□□ -1.04
BNIP3-202ENST00000540159 EPM2AB3EWF7 344 aa8.55□□□□□ -1.04
BNIP3-202ENST00000540159 BCE1O60756 84 aa8.55□□□□□ -1.04
BNIP3-202ENST00000540159 FAM229BQ4G0N7 80 aa8.55□□□□□ -1.04
BNIP3-202ENST00000540159 MDFIQ99750 246 aa8.55□□□□□ -1.04
BNIP3-202ENST00000540159 SERP1Q9Y6X1 66 aa8.54□□□□□ -1.04
BNIP3-202ENST00000540159 SPRR4Q96PI1 79 aa8.52□□□□□ -1.04
BNIP3-202ENST00000540159 FRAS1Q86XX4 4008 aa8.52□□□□□ -1.04
BNIP3-202ENST00000540159 STARD9Q9P2P6 4700 aa8.52□□□□□ -1.05
BNIP3-202ENST00000540159 APLNQ9ULZ1 77 aa8.52□□□□□ -1.05
BNIP3-202ENST00000540159 A0A0U1RQV1 116 aa8.51□□□□□ -1.05
BNIP3-202ENST00000540159 FP248Q71RG6 208 aaPredicted RBP8.51□□□□□ -1.05
BNIP3-202ENST00000540159 KMT2AQ03164 3969 aa8.5□□□□□ -1.05
BNIP3-202ENST00000540159 C5orf47Q569G3 176 aa8.5□□□□□ -1.05
BNIP3-202ENST00000540159 PRKDCP78527 4128 aaKnown RBP8.49□□□□□ -1.05
BNIP3-202ENST00000540159 IGLV9-49A0A0B4J1Y8 123 aa8.49□□□□□ -1.05
BNIP3-202ENST00000540159 HCG22E2RYF7 251 aa8.48□□□□□ -1.05
BNIP3-202ENST00000540159 CNBPP62633 177 aaKnown RBP8.48□□□□□ -1.05
BNIP3-202ENST00000540159 ANAPC11Q9NYG5 84 aa8.47□□□□□ -1.05
BNIP3-202ENST00000540159 NDUFC1O43677 76 aa8.46□□□□□ -1.06
BNIP3-202ENST00000540159 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.45□□□□□ -1.06
BNIP3-202ENST00000540159 MEGF8Q7Z7M0 2845 aa8.44□□□□□ -1.06
BNIP3-202ENST00000540159 H0Y9J4 135 aa8.44□□□□□ -1.06
BNIP3-202ENST00000540159 NBDYA0A0U1RRE5 68 aa8.43□□□□□ -1.06
BNIP3-202ENST00000540159 LINC00336Q6ZUF6 198 aa8.43□□□□□ -1.06
BNIP3-202ENST00000540159 C9orf163Q8N9P6 203 aa8.43□□□□□ -1.06
BNIP3-202ENST00000540159 SMIM26A0A096LP01 95 aa8.41□□□□□ -1.06
BNIP3-202ENST00000540159 LINC00208Q96KT6 92 aa8.41□□□□□ -1.06
BNIP3-202ENST00000540159 FBN3Q75N90 2809 aa8.41□□□□□ -1.06
BNIP3-202ENST00000540159 B9D2Q9BPU9 175 aa8.39□□□□□ -1.07
BNIP3-202ENST00000540159 C14orf177Q52M58 125 aa8.39□□□□□ -1.07
BNIP3-202ENST00000540159 A0A1B0GW54 56 aa8.37□□□□□ -1.07
BNIP3-202ENST00000540159 CASC2Q6XLA1 102 aa8.37□□□□□ -1.07
BNIP3-202ENST00000540159 DNHD1Q96M86 4753 aa8.36□□□□□ -1.07
BNIP3-202ENST00000540159 C1orf64Q8NEQ6 169 aa8.36□□□□□ -1.07
BNIP3-202ENST00000540159 BRK1Q8WUW1 75 aa8.35□□□□□ -1.07
BNIP3-202ENST00000540159 DNAH2Q9P225 4427 aa8.35□□□□□ -1.07
BNIP3-202ENST00000540159 Q6ZRN7 208 aaPredicted RBP8.35□□□□□ -1.07
BNIP3-202ENST00000540159 HECTD4Q9Y4D8 3996 aa8.34□□□□□ -1.07
BNIP3-202ENST00000540159 ATP5EP56381 51 aaPredicted RBP8.33□□□□□ -1.08
BNIP3-202ENST00000540159 VPS13DQ5THJ4 4388 aa8.32□□□□□ -1.08
BNIP3-202ENST00000540159 IGLV8-61A0A075B6I0 122 aa8.32□□□□□ -1.08
BNIP3-202ENST00000540159 PRR15Q8IV56 129 aa8.32□□□□□ -1.08
BNIP3-202ENST00000540159 H0Y9P7 68 aa8.32□□□□□ -1.08
BNIP3-202ENST00000540159 MP68P56378 58 aa8.32□□□□□ -1.08
BNIP3-202ENST00000540159 LINC00472Q9H8W2 130 aa8.31□□□□□ -1.08
BNIP3-202ENST00000540159 PSPHP1O15172 72 aa8.31□□□□□ -1.08
BNIP3-202ENST00000540159 MOBPQ13875 183 aa8.31□□□□□ -1.08
BNIP3-202ENST00000540159 ZCCHC13Q8WW36 166 aaKnown RBP8.31□□□□□ -1.08
BNIP3-202ENST00000540159 DNAH8Q96JB1 4490 aa8.3□□□□□ -1.08
BNIP3-202ENST00000540159 DNAH6Q9C0G6 4158 aa8.3□□□□□ -1.08
BNIP3-202ENST00000540159 NUPR2A6NF83 97 aa8.3□□□□□ -1.08
BNIP3-202ENST00000540159 A0A087WTM6 91 aa8.29□□□□□ -1.08
BNIP3-202ENST00000540159 PSORS1C2Q9UIG4 136 aa8.29□□□□□ -1.08
BNIP3-202ENST00000540159 DYNC2H1Q8NCM8 4307 aaKnown RBP8.29□□□□□ -1.08
BNIP3-202ENST00000540159 LCE6AA0A183 80 aa8.29□□□□□ -1.08
BNIP3-202ENST00000540159 A8MWP4 228 aa8.29□□□□□ -1.08
BNIP3-202ENST00000540159 RTL8CO15255 209 aa8.29□□□□□ -1.08
BNIP3-202ENST00000540159 NDUFS5O43920 106 aa8.29□□□□□ -1.08
BNIP3-202ENST00000540159 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
BNIP3-202ENST00000540159 DNAH17Q9UFH2 4485 aa8.29□□□□□ -1.08
BNIP3-202ENST00000540159 SPACA4Q8TDM5 124 aa8.28□□□□□ -1.08
BNIP3-202ENST00000540159 hDV103S1A0JD37 113 aa8.28□□□□□ -1.08
BNIP3-202ENST00000540159 KRTAP29-1A8MX34 341 aaPredicted RBP8.28□□□□□ -1.08
BNIP3-202ENST00000540159 PCOTHQ58A44 107 aa8.28□□□□□ -1.08
BNIP3-202ENST00000540159 PKIGQ9Y2B9 76 aa8.28□□□□□ -1.08
BNIP3-202ENST00000540159 IGHV6-1A0A0B4J1U7 121 aa8.28□□□□□ -1.08
BNIP3-202ENST00000540159 KRTAP13-1Q8IUC0 172 aa8.26□□□□□ -1.09
BNIP3-202ENST00000540159 SPRR1BP22528 89 aa8.26□□□□□ -1.09
BNIP3-202ENST00000540159 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
BNIP3-202ENST00000540159 MMP24-AS1A0A0U1RRL7 71 aa8.23□□□□□ -1.09
BNIP3-202ENST00000540159 LY6G6CO95867 125 aa8.23□□□□□ -1.09
BNIP3-202ENST00000540159 A0A087X002 238 aa8.23□□□□□ -1.09
BNIP3-202ENST00000540159 NDUFB1O75438 58 aa8.23□□□□□ -1.09
BNIP3-202ENST00000540159 NOTCH2NLQ7Z3S9 236 aa8.23□□□□□ -1.09
BNIP3-202ENST00000540159 IGLV5-52A0A0A0MRZ9 124 aa8.21□□□□□ -1.1
BNIP3-202ENST00000540159 DNAH11Q96DT5 4516 aa8.21□□□□□ -1.1
BNIP3-202ENST00000540159 CIRBP-AS1Q8TBR5 109 aa8.2□□□□□ -1.1
BNIP3-202ENST00000540159 Q96NJ1 140 aa8.2□□□□□ -1.1
BNIP3-202ENST00000540159 WWC2-AS2Q96NR7 200 aa8.18□□□□□ -1.1
BNIP3-202ENST00000540159 PRO0628Q9UI54 55 aa8.18□□□□□ -1.1
BNIP3-202ENST00000540159 A8MUN3 132 aa8.16□□□□□ -1.1
BNIP3-202ENST00000540159 CDK2AP2O75956 126 aa8.16□□□□□ -1.1
BNIP3-202ENST00000540159 A8MU10 97 aa8.14□□□□□ -1.11
BNIP3-202ENST00000540159 C8orf17Q9NRJ1 99 aa8.14□□□□□ -1.11
BNIP3-202ENST00000540159 ZNF861PO60384 105 aa8.14□□□□□ -1.11
BNIP3-202ENST00000540159 RETNLBQ9BQ08 111 aa8.14□□□□□ -1.11
BNIP3-202ENST00000540159 C1orf134Q5TEV5 83 aa8.13□□□□□ -1.11
BNIP3-202ENST00000540159 SEC61GP60059 68 aa8.12□□□□□ -1.11
BNIP3-202ENST00000540159 KRTAP10-2P60368 255 aa8.11□□□□□ -1.11
BNIP3-202ENST00000540159 CYP4F30PQ9H0H9 118 aa8.11□□□□□ -1.11
BNIP3-202ENST00000540159 HYDINQ4G0P3 5121 aa8.1□□□□□ -1.11
BNIP3-202ENST00000540159 CD164Q04900 197 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms