RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 KRTAP10-11P60412 298 aa11.18□□□□□ -0.62
RAB40C-205ENST00000539661 DEFB131BA0A096LNP1 70 aa11.17□□□□□ -0.62
RAB40C-205ENST00000539661 H3BPC8 53 aa11.17□□□□□ -0.62
RAB40C-205ENST00000539661 PSPHP1O15172 72 aa11.17□□□□□ -0.62
RAB40C-205ENST00000539661 KRTAP24-1Q3LI83 254 aa11.17□□□□□ -0.62
RAB40C-205ENST00000539661 SPANXA2-OT1Q8N9U9 137 aa11.16□□□□□ -0.62
RAB40C-205ENST00000539661 CSMD3Q7Z407 3707 aa11.16□□□□□ -0.62
RAB40C-205ENST00000539661 PRR4Q16378 134 aa11.15□□□□□ -0.62
RAB40C-205ENST00000539661 B9D2Q9BPU9 175 aa11.15□□□□□ -0.62
RAB40C-205ENST00000539661 PMAIP1Q13794 54 aa11.15□□□□□ -0.62
RAB40C-205ENST00000539661 WFDC13Q8IUB5 93 aa11.14□□□□□ -0.63
RAB40C-205ENST00000539661 KRTAP29-1A8MX34 341 aaPredicted RBP11.13□□□□□ -0.63
RAB40C-205ENST00000539661 LINC00208Q96KT6 92 aa11.12□□□□□ -0.63
RAB40C-205ENST00000539661 A0A087WSZ3 146 aa11.11□□□□□ -0.63
RAB40C-205ENST00000539661 C11orf45Q8TAV5 145 aa11.11□□□□□ -0.63
RAB40C-205ENST00000539661 COL7A1Q02388 2944 aa11.11□□□□□ -0.63
RAB40C-205ENST00000539661 LINC00588Q9Y4M8 146 aa11.1□□□□□ -0.63
RAB40C-205ENST00000539661 CASC10Q5T4H9 136 aa11.09□□□□□ -0.63
RAB40C-205ENST00000539661 A8MUN3 132 aa11.09□□□□□ -0.63
RAB40C-205ENST00000539661 DEFB116Q30KQ4 102 aa11.09□□□□□ -0.63
RAB40C-205ENST00000539661 TENM2Q9NT68 2774 aa11.08□□□□□ -0.64
RAB40C-205ENST00000539661 A0A0G2JQZ4 141 aa11.07□□□□□ -0.64
RAB40C-205ENST00000539661 A0A1W2PNN7 141 aa11.07□□□□□ -0.64
RAB40C-205ENST00000539661 H0Y9P7 68 aa11.07□□□□□ -0.64
RAB40C-205ENST00000539661 LIMD2Q9BT23 127 aa11.06□□□□□ -0.64
RAB40C-205ENST00000539661 Q5VV11 94 aa11.06□□□□□ -0.64
RAB40C-205ENST00000539661 CASC2Q6XLA1 102 aa11.06□□□□□ -0.64
RAB40C-205ENST00000539661 DNAH3Q8TD57 4116 aa11.04□□□□□ -0.64
RAB40C-205ENST00000539661 RPL37AP61513 92 aaKnown RBP11.03□□□□□ -0.64
RAB40C-205ENST00000539661 STAB2Q8WWQ8 2551 aa11.03□□□□□ -0.64
RAB40C-205ENST00000539661 Q8N9P0 234 aaPredicted RBP11.03□□□□□ -0.64
RAB40C-205ENST00000539661 A8MWP4 228 aa11.02□□□□□ -0.65
RAB40C-205ENST00000539661 UBE2AP49459 152 aa11.02□□□□□ -0.65
RAB40C-205ENST00000539661 CNBPP62633 177 aaKnown RBP11.02□□□□□ -0.65
RAB40C-205ENST00000539661 PRLHP81277 87 aa11.01□□□□□ -0.65
RAB40C-205ENST00000539661 C9orf163Q8N9P6 203 aa11.01□□□□□ -0.65
RAB40C-205ENST00000539661 HUWE1Q7Z6Z7 4374 aaKnown RBP10.99□□□□□ -0.65
RAB40C-205ENST00000539661 SPRR1BP22528 89 aa10.99□□□□□ -0.65
RAB40C-205ENST00000539661 LINC00472Q9H8W2 130 aa10.98□□□□□ -0.65
RAB40C-205ENST00000539661 C16orf90A8MZG2 172 aa10.98□□□□□ -0.65
RAB40C-205ENST00000539661 CHKB-CPT1BH3BT56 60 aa10.95□□□□□ -0.66
RAB40C-205ENST00000539661 A0A096LNI7 61 aa10.95□□□□□ -0.66
RAB40C-205ENST00000539661 DNAH10Q8IVF4 4471 aa10.94□□□□□ -0.66
RAB40C-205ENST00000539661 H0Y9J4 135 aa10.94□□□□□ -0.66
RAB40C-205ENST00000539661 CD164Q04900 197 aa10.93□□□□□ -0.66
RAB40C-205ENST00000539661 PRR15LQ9BU68 103 aa10.93□□□□□ -0.66
RAB40C-205ENST00000539661 IGLV7-46A0A075B6I9 117 aa10.92□□□□□ -0.66
RAB40C-205ENST00000539661 DNAH7Q8WXX0 4024 aa10.92□□□□□ -0.66
RAB40C-205ENST00000539661 DNAH1Q9P2D7 4330 aa10.92□□□□□ -0.66
RAB40C-205ENST00000539661 Q75L30 129 aa10.91□□□□□ -0.66
RAB40C-205ENST00000539661 LOC101927531A0A1B0GV80 90 aa10.91□□□□□ -0.66
RAB40C-205ENST00000539661 IGKV2-24A0A0C4DH68 120 aa10.89□□□□□ -0.67
RAB40C-205ENST00000539661 MMP24-AS1A0A0U1RRL7 71 aa10.89□□□□□ -0.67
RAB40C-205ENST00000539661 COA5Q86WW8 74 aa10.89□□□□□ -0.67
RAB40C-205ENST00000539661 A8MU10 97 aa10.88□□□□□ -0.67
RAB40C-205ENST00000539661 ATP11AUNQ6ZP68 121 aa10.86□□□□□ -0.67
RAB40C-205ENST00000539661 TP53AIP1Q9HCN2 124 aa10.85□□□□□ -0.67
RAB40C-205ENST00000539661 DNAH9Q9NYC9 4486 aa10.83□□□□□ -0.68
RAB40C-205ENST00000539661 ASB16-AS1Q495Z4 193 aa10.82□□□□□ -0.68
RAB40C-205ENST00000539661 KTN1-AS1Q86SY8 53 aa10.82□□□□□ -0.68
RAB40C-205ENST00000539661 PHF5AQ7RTV0 110 aaKnown RBP10.81□□□□□ -0.68
RAB40C-205ENST00000539661 A6NED7 52 aa10.8□□□□□ -0.68
RAB40C-205ENST00000539661 MOBPQ13875 183 aa10.8□□□□□ -0.68
RAB40C-205ENST00000539661 LCA10Q71F78 164 aa10.8□□□□□ -0.68
RAB40C-205ENST00000539661 KRTAP11-1Q8IUC1 163 aa10.8□□□□□ -0.68
RAB40C-205ENST00000539661 C14orf177Q52M58 125 aa10.78□□□□□ -0.68
RAB40C-205ENST00000539661 Q6ZR54 194 aa10.78□□□□□ -0.68
RAB40C-205ENST00000539661 LINC01558Q9Y6Z2 57 aa10.78□□□□□ -0.68
RAB40C-205ENST00000539661 CDC42SE1Q9NRR8 79 aa10.77□□□□□ -0.69
RAB40C-205ENST00000539661 K7EIL1 84 aa10.76□□□□□ -0.69
RAB40C-205ENST00000539661 SPTSSBQ8NFR3 76 aa10.76□□□□□ -0.69
RAB40C-205ENST00000539661 PLAC8Q9NZF1 115 aa10.76□□□□□ -0.69
RAB40C-205ENST00000539661 NDUFS5O43920 106 aa10.74□□□□□ -0.69
RAB40C-205ENST00000539661 PCOTHQ58A44 107 aa10.74□□□□□ -0.69
RAB40C-205ENST00000539661 Q96NJ1 140 aa10.74□□□□□ -0.69
RAB40C-205ENST00000539661 MDFIQ99750 246 aa10.73□□□□□ -0.69
RAB40C-205ENST00000539661 DNHD1Q96M86 4753 aa10.73□□□□□ -0.69
RAB40C-205ENST00000539661 KRTAP1-5Q9BYS1 174 aa10.73□□□□□ -0.69
RAB40C-205ENST00000539661 CHTF8P0CG12 524 aa10.72□□□□□ -0.69
RAB40C-205ENST00000539661 C8orf17Q9NRJ1 99 aa10.72□□□□□ -0.69
RAB40C-205ENST00000539661 PRKDCP78527 4128 aaKnown RBP10.72□□□□□ -0.69
RAB40C-205ENST00000539661 A6NN06 94 aa10.71□□□□□ -0.69
RAB40C-205ENST00000539661 KRTAP13-1Q8IUC0 172 aa10.71□□□□□ -0.69
RAB40C-205ENST00000539661 PLECQ15149 4684 aaKnown RBP10.69□□□□□ -0.7
RAB40C-205ENST00000539661 SPAG11AQ6PDA7 123 aa10.67□□□□□ -0.7
RAB40C-205ENST00000539661 SRRM2Q9UQ35 2752 aaKnown RBP10.67□□□□□ -0.7
RAB40C-205ENST00000539661 A0A1B0GVX0 72 aa10.65□□□□□ -0.7
RAB40C-205ENST00000539661 HRES1P13985 223 aa10.64□□□□□ -0.71
RAB40C-205ENST00000539661 RBM12B-AS1Q9P1G2 102 aa10.63□□□□□ -0.71
RAB40C-205ENST00000539661 MRPL34Q9BQ48 92 aaKnown RBP10.62□□□□□ -0.71
RAB40C-205ENST00000539661 LINC00483Q53H64 154 aa10.62□□□□□ -0.71
RAB40C-205ENST00000539661 MEGF8Q7Z7M0 2845 aa10.61□□□□□ -0.71
RAB40C-205ENST00000539661 IGLV9-49A0A0B4J1Y8 123 aa10.61□□□□□ -0.71
RAB40C-205ENST00000539661 STARD9Q9P2P6 4700 aa10.61□□□□□ -0.71
RAB40C-205ENST00000539661 IGHV6-1A0A0B4J1U7 121 aa10.6□□□□□ -0.71
RAB40C-205ENST00000539661 TGP01266 2768 aa10.59□□□□□ -0.71
RAB40C-205ENST00000539661 CDK2AP2O75956 126 aa10.59□□□□□ -0.71
RAB40C-205ENST00000539661 C7orf65Q6ZTY9 151 aa10.58□□□□□ -0.72
RAB40C-205ENST00000539661 UBE2DNLQ8IWF7 75 aa10.58□□□□□ -0.72
RAB40C-205ENST00000539661 KMT2AQ03164 3969 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms