RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 H3BQ85 93 aa6.51□□□□□ -1.37
LEMD3-202ENST00000539442 RPL37AP61513 92 aaKnown RBP6.51□□□□□ -1.37
LEMD3-202ENST00000539442 Q6ZQY7 126 aa6.51□□□□□ -1.37
LEMD3-202ENST00000539442 ORMDL1Q9P0S3 153 aa6.51□□□□□ -1.37
LEMD3-202ENST00000539442 EPPK1P58107 5090 aaKnown RBP6.51□□□□□ -1.37
LEMD3-202ENST00000539442 H3BT86 120 aa6.5□□□□□ -1.37
LEMD3-202ENST00000539442 ERC2-IT1O76042 136 aa6.49□□□□□ -1.37
LEMD3-202ENST00000539442 SMR3BP02814 79 aaPredicted RBP6.49□□□□□ -1.37
LEMD3-202ENST00000539442 PPDPFLQ8WWR9 84 aa6.49□□□□□ -1.37
LEMD3-202ENST00000539442 RYR1P21817 5038 aa6.48□□□□□ -1.37
LEMD3-202ENST00000539442 IGLV5-48A0A075B6I7 105 aa6.48□□□□□ -1.37
LEMD3-202ENST00000539442 F8W1H4 67 aa6.48□□□□□ -1.37
LEMD3-202ENST00000539442 LINC01600Q96MT4 127 aa6.48□□□□□ -1.37
LEMD3-202ENST00000539442 PRO0461Q9UI25 63 aa6.48□□□□□ -1.37
LEMD3-202ENST00000539442 ZNF706Q9Y5V0 76 aaPredicted RBP6.48□□□□□ -1.37
LEMD3-202ENST00000539442 TMEM256-PLSCR3K7ERE1 68 aa6.47□□□□□ -1.37
LEMD3-202ENST00000539442 BAALC-AS2P0C853 105 aa6.47□□□□□ -1.37
LEMD3-202ENST00000539442 PLA2G1BP04054 148 aaKnown RBP6.46□□□□□ -1.38
LEMD3-202ENST00000539442 LINC01547P58512 204 aaPredicted RBP6.46□□□□□ -1.38
LEMD3-202ENST00000539442 MTURNQ8N3F0 131 aa6.46□□□□□ -1.38
LEMD3-202ENST00000539442 ANKRD29Q8N6D5 301 aa6.46□□□□□ -1.38
LEMD3-202ENST00000539442 ST20-AS1Q8NBB2 130 aa6.46□□□□□ -1.38
LEMD3-202ENST00000539442 TEX49A0A1B0GTD5 131 aa6.45□□□□□ -1.38
LEMD3-202ENST00000539442 SPRR1BP22528 89 aa6.45□□□□□ -1.38
LEMD3-202ENST00000539442 KRTAP10-4P60372 401 aaPredicted RBP6.45□□□□□ -1.38
LEMD3-202ENST00000539442 SPINK6Q6UWN8 80 aa6.44□□□□□ -1.38
LEMD3-202ENST00000539442 Q8N377 158 aa6.44□□□□□ -1.38
LEMD3-202ENST00000539442 SPRR4Q96PI1 79 aa6.44□□□□□ -1.38
LEMD3-202ENST00000539442 KIAA1109Q2LD37 5005 aa6.43□□□□□ -1.38
LEMD3-202ENST00000539442 DEFB105AQ8NG35 78 aa6.43□□□□□ -1.38
LEMD3-202ENST00000539442 LINC00483Q53H64 154 aa6.42□□□□□ -1.38
LEMD3-202ENST00000539442 GAGE2AQ6NT46 116 aa6.42□□□□□ -1.38
LEMD3-202ENST00000539442 VPS13BQ7Z7G8 4022 aa6.42□□□□□ -1.38
LEMD3-202ENST00000539442 HSPG2P98160 4391 aa6.42□□□□□ -1.38
LEMD3-202ENST00000539442 NDUFV3P56181 108 aaKnown RBP6.41□□□□□ -1.38
LEMD3-202ENST00000539442 Q5VSD8 79 aa6.41□□□□□ -1.38
LEMD3-202ENST00000539442 Q8N1X5 172 aa6.41□□□□□ -1.38
LEMD3-202ENST00000539442 LAMTOR3Q9UHA4 124 aa6.41□□□□□ -1.38
LEMD3-202ENST00000539442 FAT1Q14517 4588 aa6.41□□□□□ -1.38
LEMD3-202ENST00000539442 JMJD7-PLA2G4BH0Y9G9 81 aa6.4□□□□□ -1.38
LEMD3-202ENST00000539442 BIRC6Q9NR09 4857 aa6.39□□□□□ -1.39
LEMD3-202ENST00000539442 SMIM29Q86T20 159 aa6.39□□□□□ -1.39
LEMD3-202ENST00000539442 TEN1Q86WV5 123 aa6.39□□□□□ -1.39
LEMD3-202ENST00000539442 F8WEM9 126 aa6.38□□□□□ -1.39
LEMD3-202ENST00000539442 ETDBQ3ZM63 59 aa6.38□□□□□ -1.39
LEMD3-202ENST00000539442 FAM229BQ4G0N7 80 aa6.38□□□□□ -1.39
LEMD3-202ENST00000539442 OBSCN-AS1Q96MR7 158 aa6.38□□□□□ -1.39
LEMD3-202ENST00000539442 C3orf22Q8N5N4 141 aa6.37□□□□□ -1.39
LEMD3-202ENST00000539442 IGLV8-61A0A075B6I0 122 aa6.36□□□□□ -1.39
LEMD3-202ENST00000539442 KRTAP1-4P0C5Y4 121 aa6.36□□□□□ -1.39
LEMD3-202ENST00000539442 RBM3P98179 157 aaKnown RBP6.36□□□□□ -1.39
LEMD3-202ENST00000539442 SRRM2Q9UQ35 2752 aaKnown RBP6.34□□□□□ -1.39
LEMD3-202ENST00000539442 C21orf62-AS1Q17RA5 79 aa6.34□□□□□ -1.39
LEMD3-202ENST00000539442 DSCR8Q96T75 97 aa6.34□□□□□ -1.39
LEMD3-202ENST00000539442 ANAPC11Q9NYG5 84 aa6.34□□□□□ -1.39
LEMD3-202ENST00000539442 LOC110117498A0A087WWA1 95 aa6.33□□□□□ -1.4
LEMD3-202ENST00000539442 TRBV7-4A0A0J9YYF1 115 aa6.33□□□□□ -1.4
LEMD3-202ENST00000539442 H3BS24 57 aa6.33□□□□□ -1.4
LEMD3-202ENST00000539442 CRYGAP11844 174 aa6.33□□□□□ -1.4
LEMD3-202ENST00000539442 PDE6GP18545 87 aa6.33□□□□□ -1.4
LEMD3-202ENST00000539442 Q6JHZ5 121 aa6.33□□□□□ -1.4
LEMD3-202ENST00000539442 Q8NBF4 154 aa6.33□□□□□ -1.4
LEMD3-202ENST00000539442 IGLV9-49A0A0B4J1Y8 123 aa6.32□□□□□ -1.4
LEMD3-202ENST00000539442 A0A1B0GV72 72 aa6.32□□□□□ -1.4
LEMD3-202ENST00000539442 C9orf153Q5TBE3 101 aa6.32□□□□□ -1.4
LEMD3-202ENST00000539442 C14orf132Q9NPU4 83 aa6.32□□□□□ -1.4
LEMD3-202ENST00000539442 MOBPQ13875 183 aa6.31□□□□□ -1.4
LEMD3-202ENST00000539442 PKHD1L1Q86WI1 4243 aa6.3□□□□□ -1.4
LEMD3-202ENST00000539442 A0A087X002 238 aa6.3□□□□□ -1.4
LEMD3-202ENST00000539442 Q6ZQT0 140 aa6.3□□□□□ -1.4
LEMD3-202ENST00000539442 SSBP3-AS1Q7Z2R9 100 aa6.3□□□□□ -1.4
LEMD3-202ENST00000539442 KRTAP13-2Q52LG2 175 aa6.29□□□□□ -1.4
LEMD3-202ENST00000539442 IGFL1Q6UW32 110 aa6.29□□□□□ -1.4
LEMD3-202ENST00000539442 HERC2O95714 4834 aa6.27□□□□□ -1.41
LEMD3-202ENST00000539442 J3QR89 54 aa6.27□□□□□ -1.41
LEMD3-202ENST00000539442 CCKP06307 115 aa6.27□□□□□ -1.41
LEMD3-202ENST00000539442 A0A1B0GW54 56 aa6.26□□□□□ -1.41
LEMD3-202ENST00000539442 Q6Q795 121 aa6.26□□□□□ -1.41
LEMD3-202ENST00000539442 PRR26Q8N8Z3 221 aa6.26□□□□□ -1.41
LEMD3-202ENST00000539442 TYMSOSQ8TAI1 123 aa6.26□□□□□ -1.41
LEMD3-202ENST00000539442 A0A1W2PNM2 257 aa6.25□□□□□ -1.41
LEMD3-202ENST00000539442 FAM240AA0A1B0GVK7 77 aa6.24□□□□□ -1.41
LEMD3-202ENST00000539442 CD164Q04900 197 aa6.24□□□□□ -1.41
LEMD3-202ENST00000539442 VPS25Q9BRG1 176 aa6.24□□□□□ -1.41
LEMD3-202ENST00000539442 A0A0G2JQZ4 141 aa6.23□□□□□ -1.41
LEMD3-202ENST00000539442 K7ERU9 68 aa6.23□□□□□ -1.41
LEMD3-202ENST00000539442 ACYP1P07311 99 aa6.23□□□□□ -1.41
LEMD3-202ENST00000539442 TRBV7-7A0A0K0K1E9 115 aa6.21□□□□□ -1.42
LEMD3-202ENST00000539442 OXTP01178 125 aa6.2□□□□□ -1.42
LEMD3-202ENST00000539442 SPAG11AQ6PDA7 123 aa6.2□□□□□ -1.42
LEMD3-202ENST00000539442 KRTAP10-8P60410 259 aa6.19□□□□□ -1.42
LEMD3-202ENST00000539442 LINC00304Q8N9R0 145 aa6.19□□□□□ -1.42
LEMD3-202ENST00000539442 A0A087WSZ3 146 aa6.18□□□□□ -1.42
LEMD3-202ENST00000539442 SPINK1P00995 79 aa6.18□□□□□ -1.42
LEMD3-202ENST00000539442 RPS29P62273 56 aaKnown RBP6.18□□□□□ -1.42
LEMD3-202ENST00000539442 HRCT1Q6UXD1 115 aa6.18□□□□□ -1.42
LEMD3-202ENST00000539442 SS18L2Q9UHA2 77 aa6.18□□□□□ -1.42
LEMD3-202ENST00000539442 LINC00846Q9NV44 126 aa6.17□□□□□ -1.42
LEMD3-202ENST00000539442 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
LEMD3-202ENST00000539442 ABCA13Q86UQ4 5058 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms