RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 C3orf84H3BNL1 204 aa4.33□□□□□ -1.72
PROM1-219ENST00000539194 KRTAP13-1Q8IUC0 172 aa4.33□□□□□ -1.72
PROM1-219ENST00000539194 H0Y9J4 135 aa4.33□□□□□ -1.72
PROM1-219ENST00000539194 C5orf47Q569G3 176 aa4.33□□□□□ -1.72
PROM1-219ENST00000539194 A0A096LNI7 61 aa4.32□□□□□ -1.72
PROM1-219ENST00000539194 REG3GQ6UW15 175 aa4.32□□□□□ -1.72
PROM1-219ENST00000539194 IGFL1Q6UW32 110 aa4.32□□□□□ -1.72
PROM1-219ENST00000539194 PKD1P98161 4303 aa4.32□□□□□ -1.72
PROM1-219ENST00000539194 KRTAP29-1A8MX34 341 aaPredicted RBP4.31□□□□□ -1.72
PROM1-219ENST00000539194 ATP5EP56381 51 aaPredicted RBP4.31□□□□□ -1.72
PROM1-219ENST00000539194 NOTCH1P46531 2555 aa4.31□□□□□ -1.72
PROM1-219ENST00000539194 LINC00476Q8WZB0 136 aa4.31□□□□□ -1.72
PROM1-219ENST00000539194 DNAH11Q96DT5 4516 aa4.31□□□□□ -1.72
PROM1-219ENST00000539194 MGAM2Q2M2H8 2515 aa4.31□□□□□ -1.72
PROM1-219ENST00000539194 LRCOL1A6NCL2 159 aa4.31□□□□□ -1.72
PROM1-219ENST00000539194 K7EQZ3 153 aa4.31□□□□□ -1.72
PROM1-219ENST00000539194 Q6ZRN7 208 aaPredicted RBP4.31□□□□□ -1.72
PROM1-219ENST00000539194 FAM229BQ4G0N7 80 aa4.3□□□□□ -1.72
PROM1-219ENST00000539194 DEFB105AQ8NG35 78 aa4.3□□□□□ -1.72
PROM1-219ENST00000539194 APLNQ9ULZ1 77 aa4.3□□□□□ -1.72
PROM1-219ENST00000539194 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
PROM1-219ENST00000539194 ETDCA0A1B0GVM5 59 aa4.29□□□□□ -1.72
PROM1-219ENST00000539194 FUSP35637 526 aaKnown RBP eCLIP4.29□□□□□ -1.72
PROM1-219ENST00000539194 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
PROM1-219ENST00000539194 HIGD2AQ9BW72 106 aa4.28□□□□□ -1.72
PROM1-219ENST00000539194 A0A0G2JQZ4 141 aa4.28□□□□□ -1.72
PROM1-219ENST00000539194 STAB2Q8WWQ8 2551 aa4.27□□□□□ -1.73
PROM1-219ENST00000539194 KRTAP3-3Q9BYR6 98 aa4.27□□□□□ -1.73
PROM1-219ENST00000539194 KRTAP3-2Q9BYR7 98 aa4.27□□□□□ -1.73
PROM1-219ENST00000539194 LINC00472Q9H8W2 130 aa4.27□□□□□ -1.73
PROM1-219ENST00000539194 FAT2Q9NYQ8 4349 aa4.27□□□□□ -1.73
PROM1-219ENST00000539194 CHTF8P0CG12 524 aa4.27□□□□□ -1.73
PROM1-219ENST00000539194 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
PROM1-219ENST00000539194 PANO1I0J062 215 aa4.26□□□□□ -1.73
PROM1-219ENST00000539194 HRCT1Q6UXD1 115 aa4.26□□□□□ -1.73
PROM1-219ENST00000539194 LINC00474Q9P2X8 69 aa4.26□□□□□ -1.73
PROM1-219ENST00000539194 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.26□□□□□ -1.73
PROM1-219ENST00000539194 Q96NJ1 140 aa4.26□□□□□ -1.73
PROM1-219ENST00000539194 C9orf163Q8N9P6 203 aa4.25□□□□□ -1.73
PROM1-219ENST00000539194 PRLHP81277 87 aa4.25□□□□□ -1.73
PROM1-219ENST00000539194 hDV103S1A0JD37 113 aa4.25□□□□□ -1.73
PROM1-219ENST00000539194 PSCAO43653 123 aa4.25□□□□□ -1.73
PROM1-219ENST00000539194 CYP4F30PQ9H0H9 118 aa4.25□□□□□ -1.73
PROM1-219ENST00000539194 HCG22E2RYF7 251 aa4.24□□□□□ -1.73
PROM1-219ENST00000539194 FAM30AQ9NZY2 134 aa4.24□□□□□ -1.73
PROM1-219ENST00000539194 LINC00483Q53H64 154 aa4.23□□□□□ -1.73
PROM1-219ENST00000539194 LINC00336Q6ZUF6 198 aa4.23□□□□□ -1.73
PROM1-219ENST00000539194 UBE2BP63146 152 aa4.23□□□□□ -1.73
PROM1-219ENST00000539194 PHF5AQ7RTV0 110 aaKnown RBP4.23□□□□□ -1.73
PROM1-219ENST00000539194 SPACA4Q8TDM5 124 aa4.21□□□□□ -1.73
PROM1-219ENST00000539194 PRR15Q8IV56 129 aa4.21□□□□□ -1.74
PROM1-219ENST00000539194 MEGF8Q7Z7M0 2845 aa4.21□□□□□ -1.74
PROM1-219ENST00000539194 A0A087WSZ3 146 aa4.2□□□□□ -1.74
PROM1-219ENST00000539194 Q1T7F1 81 aa4.2□□□□□ -1.74
PROM1-219ENST00000539194 C1orf64Q8NEQ6 169 aa4.2□□□□□ -1.74
PROM1-219ENST00000539194 A8MWP4 228 aa4.2□□□□□ -1.74
PROM1-219ENST00000539194 HYDINQ4G0P3 5121 aa4.19□□□□□ -1.74
PROM1-219ENST00000539194 TRAV22A0A0B4J277 110 aa4.19□□□□□ -1.74
PROM1-219ENST00000539194 MMP24-AS1A0A0U1RRL7 71 aa4.19□□□□□ -1.74
PROM1-219ENST00000539194 RPL37AP61513 92 aaKnown RBP4.19□□□□□ -1.74
PROM1-219ENST00000539194 C14orf177Q52M58 125 aa4.19□□□□□ -1.74
PROM1-219ENST00000539194 B9D2Q9BPU9 175 aa4.19□□□□□ -1.74
PROM1-219ENST00000539194 IGKV2-24A0A0C4DH68 120 aa4.18□□□□□ -1.74
PROM1-219ENST00000539194 NBDYA0A0U1RRE5 68 aa4.18□□□□□ -1.74
PROM1-219ENST00000539194 DEFB116Q30KQ4 102 aa4.18□□□□□ -1.74
PROM1-219ENST00000539194 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.18□□□□□ -1.74
PROM1-219ENST00000539194 DNHD1Q96M86 4753 aa4.18□□□□□ -1.74
PROM1-219ENST00000539194 SPANXA2-OT1Q8N9U9 137 aa4.18□□□□□ -1.74
PROM1-219ENST00000539194 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
PROM1-219ENST00000539194 C4orf48Q5BLP8 95 aa4.18□□□□□ -1.74
PROM1-219ENST00000539194 LRP1BQ9NZR2 4599 aa4.17□□□□□ -1.74
PROM1-219ENST00000539194 VPS13BQ7Z7G8 4022 aa4.17□□□□□ -1.74
PROM1-219ENST00000539194 H3BPC8 53 aa4.17□□□□□ -1.74
PROM1-219ENST00000539194 UBE2AP49459 152 aa4.17□□□□□ -1.74
PROM1-219ENST00000539194 WWC2-AS2Q96NR7 200 aa4.16□□□□□ -1.74
PROM1-219ENST00000539194 Q6ZR54 194 aa4.16□□□□□ -1.74
PROM1-219ENST00000539194 KRTAP21-3Q3LHN1 58 aa4.15□□□□□ -1.75
PROM1-219ENST00000539194 KRTAP13-3Q3SY46 172 aa4.15□□□□□ -1.75
PROM1-219ENST00000539194 MOBPQ13875 183 aa4.15□□□□□ -1.75
PROM1-219ENST00000539194 UBE2DNLQ8IWF7 75 aa4.14□□□□□ -1.75
PROM1-219ENST00000539194 PLAC8Q9NZF1 115 aa4.14□□□□□ -1.75
PROM1-219ENST00000539194 CASC2Q6XLA1 102 aa4.13□□□□□ -1.75
PROM1-219ENST00000539194 NDUFB1O75438 58 aa4.13□□□□□ -1.75
PROM1-219ENST00000539194 PKIGQ9Y2B9 76 aa4.13□□□□□ -1.75
PROM1-219ENST00000539194 IGLV5-52A0A0A0MRZ9 124 aa4.13□□□□□ -1.75
PROM1-219ENST00000539194 A0A087WTM6 91 aa4.12□□□□□ -1.75
PROM1-219ENST00000539194 WFDC13Q8IUB5 93 aa4.12□□□□□ -1.75
PROM1-219ENST00000539194 PKHD1L1Q86WI1 4243 aa4.12□□□□□ -1.75
PROM1-219ENST00000539194 NUPR2A6NF83 97 aa4.11□□□□□ -1.75
PROM1-219ENST00000539194 SACSQ9NZJ4 4579 aa4.11□□□□□ -1.75
PROM1-219ENST00000539194 IGLV7-46A0A075B6I9 117 aa4.11□□□□□ -1.75
PROM1-219ENST00000539194 H0Y9P7 68 aa4.1□□□□□ -1.75
PROM1-219ENST00000539194 PSORS1C2Q9UIG4 136 aa4.1□□□□□ -1.75
PROM1-219ENST00000539194 PKHD1P08F94 4074 aa4.09□□□□□ -1.75
PROM1-219ENST00000539194 A0A087X002 238 aa4.09□□□□□ -1.75
PROM1-219ENST00000539194 NOTCH2NLQ7Z3S9 236 aa4.09□□□□□ -1.75
PROM1-219ENST00000539194 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
PROM1-219ENST00000539194 LINC00208Q96KT6 92 aa4.09□□□□□ -1.76
PROM1-219ENST00000539194 Q8N9P0 234 aaPredicted RBP4.08□□□□□ -1.76
PROM1-219ENST00000539194 C8orf17Q9NRJ1 99 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms