RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
USP28-207ENST00000538475 WFDC10BQ8IUB3 73 aa4.2□□□□□ -1.74
USP28-207ENST00000538475 LINC00472Q9H8W2 130 aa4.2□□□□□ -1.74
USP28-207ENST00000538475 MXRA5Q9NR99 2828 aa4.2□□□□□ -1.74
USP28-207ENST00000538475 IGF2RP11717 2491 aa4.19□□□□□ -1.74
USP28-207ENST00000538475 A8MU10 97 aa4.19□□□□□ -1.74
USP28-207ENST00000538475 C8orf87E5RJ46 101 aa4.19□□□□□ -1.74
USP28-207ENST00000538475 RPL37AP61513 92 aaKnown RBP4.19□□□□□ -1.74
USP28-207ENST00000538475 ZFYVE26Q68DK2 2539 aa4.19□□□□□ -1.74
USP28-207ENST00000538475 A0A087WSZ3 146 aa4.18□□□□□ -1.74
USP28-207ENST00000538475 DEFB135Q30KP9 77 aa4.18□□□□□ -1.74
USP28-207ENST00000538475 HIVEP2P31629 2446 aa4.18□□□□□ -1.74
USP28-207ENST00000538475 DNAH10OSP0CZ25 163 aa4.17□□□□□ -1.74
USP28-207ENST00000538475 MAPK1IP1LQ8NDC0 245 aa4.17□□□□□ -1.74
USP28-207ENST00000538475 ASPMQ8IZT6 3477 aa4.16□□□□□ -1.74
USP28-207ENST00000538475 IGKV2D-30A0A075B6S6 120 aa4.16□□□□□ -1.74
USP28-207ENST00000538475 MMP24-AS1A0A0U1RRL7 71 aa4.16□□□□□ -1.74
USP28-207ENST00000538475 TEX15Q9BXT5 2789 aa4.16□□□□□ -1.74
USP28-207ENST00000538475 CELSR2Q9HCU4 2923 aa4.15□□□□□ -1.74
USP28-207ENST00000538475 CRYBG3Q68DQ2 2970 aa4.15□□□□□ -1.74
USP28-207ENST00000538475 NAV2Q8IVL1 2488 aa4.15□□□□□ -1.74
USP28-207ENST00000538475 HTN3P15516 51 aa4.15□□□□□ -1.75
USP28-207ENST00000538475 KRTAP10-9P60411 292 aa4.14□□□□□ -1.75
USP28-207ENST00000538475 LINC01554Q52M75 96 aa4.14□□□□□ -1.75
USP28-207ENST00000538475 SPAG11AQ6PDA7 123 aa4.14□□□□□ -1.75
USP28-207ENST00000538475 COL12A1Q99715 3063 aa4.13□□□□□ -1.75
USP28-207ENST00000538475 IGKV2-24A0A0C4DH68 120 aa4.13□□□□□ -1.75
USP28-207ENST00000538475 HRES1P13985 223 aa4.13□□□□□ -1.75
USP28-207ENST00000538475 GCN1Q92616 2671 aaKnown RBP4.12□□□□□ -1.75
USP28-207ENST00000538475 DEFB4AO15263 64 aa4.12□□□□□ -1.75
USP28-207ENST00000538475 ACYP2P14621 99 aa4.12□□□□□ -1.75
USP28-207ENST00000538475 SPINK7P58062 85 aa4.12□□□□□ -1.75
USP28-207ENST00000538475 LINC00313P59037 77 aa4.12□□□□□ -1.75
USP28-207ENST00000538475 KRTAP7-1Q8IUC3 87 aa4.12□□□□□ -1.75
USP28-207ENST00000538475 EPG5Q9HCE0 2579 aa4.12□□□□□ -1.75
USP28-207ENST00000538475 UTP20O75691 2785 aaKnown RBP4.12□□□□□ -1.75
USP28-207ENST00000538475 ACACBO00763 2458 aa4.12□□□□□ -1.75
USP28-207ENST00000538475 DEFB116Q30KQ4 102 aa4.11□□□□□ -1.75
USP28-207ENST00000538475 SPATA8Q6RVD6 105 aa4.11□□□□□ -1.75
USP28-207ENST00000538475 C11orf45Q8TAV5 145 aa4.11□□□□□ -1.75
USP28-207ENST00000538475 KRTAP1-5Q9BYS1 174 aa4.11□□□□□ -1.75
USP28-207ENST00000538475 CHD8Q9HCK8 2581 aa4.1□□□□□ -1.75
USP28-207ENST00000538475 ZANQ9Y493 2812 aa4.1□□□□□ -1.75
USP28-207ENST00000538475 PRB2P02812 416 aaPredicted RBP4.1□□□□□ -1.75
USP28-207ENST00000538475 RETNLBQ9BQ08 111 aa4.1□□□□□ -1.75
USP28-207ENST00000538475 C8orf17Q9NRJ1 99 aa4.1□□□□□ -1.75
USP28-207ENST00000538475 SPTBN4Q9H254 2564 aa4.1□□□□□ -1.75
USP28-207ENST00000538475 FAM168BA1KXE4 195 aa4.09□□□□□ -1.75
USP28-207ENST00000538475 RTL8CO15255 209 aa4.09□□□□□ -1.75
USP28-207ENST00000538475 KMT2BQ9UMN6 2715 aaPredicted RBP4.08□□□□□ -1.76
USP28-207ENST00000538475 A0A1B0GVX0 72 aa4.08□□□□□ -1.76
USP28-207ENST00000538475 PRR26Q8N8Z3 221 aa4.08□□□□□ -1.76
USP28-207ENST00000538475 MRPL34Q9BQ48 92 aaKnown RBP4.08□□□□□ -1.76
USP28-207ENST00000538475 SONP18583 2426 aaKnown RBP4.07□□□□□ -1.76
USP28-207ENST00000538475 RELNP78509 3460 aa4.07□□□□□ -1.76
USP28-207ENST00000538475 MUC3AQ02505 3323 aa4.07□□□□□ -1.76
USP28-207ENST00000538475 CFAP46Q8IYW2 2715 aa4.07□□□□□ -1.76
USP28-207ENST00000538475 CDK2AP2O75956 126 aa4.07□□□□□ -1.76
USP28-207ENST00000538475 C14orf177Q52M58 125 aa4.07□□□□□ -1.76
USP28-207ENST00000538475 PCOTHQ58A44 107 aa4.07□□□□□ -1.76
USP28-207ENST00000538475 LAMA5O15230 3695 aa4.07□□□□□ -1.76
USP28-207ENST00000538475 ITPR3Q14573 2671 aa4.06□□□□□ -1.76
USP28-207ENST00000538475 UQCR11O14957 56 aa4.05□□□□□ -1.76
USP28-207ENST00000538475 KRTAP10-3P60369 221 aa4.05□□□□□ -1.76
USP28-207ENST00000538475 DMAC1Q96GE9 116 aa4.05□□□□□ -1.76
USP28-207ENST00000538475 Q96NJ1 140 aa4.05□□□□□ -1.76
USP28-207ENST00000538475 FAM208BQ5VWN6 2430 aa4.05□□□□□ -1.76
USP28-207ENST00000538475 SVEP1Q4LDE5 3571 aa4.05□□□□□ -1.76
USP28-207ENST00000538475 AKAP9Q99996 3911 aa4.05□□□□□ -1.76
USP28-207ENST00000538475 FBN2P35556 2912 aa4.05□□□□□ -1.76
USP28-207ENST00000538475 PKD1L2Q7Z442 2459 aa4.04□□□□□ -1.76
USP28-207ENST00000538475 ALMS1Q8TCU4 4167 aa4.04□□□□□ -1.76
USP28-207ENST00000538475 SETD2Q9BYW2 2564 aaPredicted RBP4.04□□□□□ -1.76
USP28-207ENST00000538475 PRLHP81277 87 aa4.04□□□□□ -1.76
USP28-207ENST00000538475 ZNF706Q9Y5V0 76 aaPredicted RBP4.04□□□□□ -1.76
USP28-207ENST00000538475 MYO18BQ8IUG5 2567 aa4.04□□□□□ -1.76
USP28-207ENST00000538475 A0A1B0GU69 56 aa4.03□□□□□ -1.76
USP28-207ENST00000538475 LINC00483Q53H64 154 aa4.03□□□□□ -1.76
USP28-207ENST00000538475 POLQO75417 2590 aa4.03□□□□□ -1.77
USP28-207ENST00000538475 TENM2Q9NT68 2774 aa4.02□□□□□ -1.77
USP28-207ENST00000538475 FLNCQ14315 2725 aa4.02□□□□□ -1.77
USP28-207ENST00000538475 ABCA12Q86UK0 2595 aa4.02□□□□□ -1.77
USP28-207ENST00000538475 NBEAL2Q6ZNJ1 2754 aa4.02□□□□□ -1.77
USP28-207ENST00000538475 IGHV6-1A0A0B4J1U7 121 aa4.02□□□□□ -1.77
USP28-207ENST00000538475 KRTAP13-3Q3SY46 172 aa4.02□□□□□ -1.77
USP28-207ENST00000538475 VPS13CQ709C8 3753 aa4.02□□□□□ -1.77
USP28-207ENST00000538475 F8P00451 2351 aa4.02□□□□□ -1.77
USP28-207ENST00000538475 NF1P21359 2839 aa4.01□□□□□ -1.77
USP28-207ENST00000538475 A0A0G2JQZ4 141 aa4.01□□□□□ -1.77
USP28-207ENST00000538475 A0A1W2PNN7 141 aa4.01□□□□□ -1.77
USP28-207ENST00000538475 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
USP28-207ENST00000538475 KRTAP13-1Q8IUC0 172 aa4.01□□□□□ -1.77
USP28-207ENST00000538475 FLNAP21333 2647 aaKnown RBP4.01□□□□□ -1.77
USP28-207ENST00000538475 PIEZO1Q92508 2521 aa4□□□□□ -1.77
USP28-207ENST00000538475 UNC79Q9P2D8 2635 aa4□□□□□ -1.77
USP28-207ENST00000538475 A0A096LNI7 61 aa4□□□□□ -1.77
USP28-207ENST00000538475 MTORP42345 2549 aa3.98□□□□□ -1.77
USP28-207ENST00000538475 NOTCH2Q04721 2471 aa3.98□□□□□ -1.77
USP28-207ENST00000538475 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
USP28-207ENST00000538475 CCDC168Q8NDH2 2452 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms