RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 LINC00846Q9NV44 126 aa5.15□□□□□ -1.59
USP28-205ENST00000537706 TRACP01848 142 aa5.14□□□□□ -1.59
USP28-205ENST00000537706 UBE2AP49459 152 aa5.13□□□□□ -1.59
USP28-205ENST00000537706 XP32Q5T750 250 aa5.13□□□□□ -1.59
USP28-205ENST00000537706 SSPOA2VEC9 5147 aa5.13□□□□□ -1.59
USP28-205ENST00000537706 C10orf25Q5T742 122 aa5.13□□□□□ -1.59
USP28-205ENST00000537706 SMIM11BQ8TCY0 68 aa5.13□□□□□ -1.59
USP28-205ENST00000537706 IGLV8-61A0A075B6I0 122 aa5.12□□□□□ -1.59
USP28-205ENST00000537706 UNQ6190/PRO20217Q6UXQ8 127 aa5.12□□□□□ -1.59
USP28-205ENST00000537706 KRTAP7-1Q8IUC3 87 aa5.12□□□□□ -1.59
USP28-205ENST00000537706 H0YGX0 51 aa5.11□□□□□ -1.59
USP28-205ENST00000537706 FAM218AQ96MZ4 157 aa5.11□□□□□ -1.59
USP28-205ENST00000537706 C22orf24Q9Y442 160 aa5.11□□□□□ -1.59
USP28-205ENST00000537706 OR13C6PQ8NH95 151 aa5.11□□□□□ -1.59
USP28-205ENST00000537706 C6orf48Q9UBA6 75 aa5.11□□□□□ -1.59
USP28-205ENST00000537706 NDUFC2-KCTD14E9PQ53 114 aa5.1□□□□□ -1.59
USP28-205ENST00000537706 TEX49A0A1B0GTD5 131 aa5.09□□□□□ -1.59
USP28-205ENST00000537706 TMEM126AQ9H061 195 aa5.09□□□□□ -1.59
USP28-205ENST00000537706 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.59
USP28-205ENST00000537706 C9orf129Q5T035 196 aaKnown RBP5.09□□□□□ -1.6
USP28-205ENST00000537706 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.6
USP28-205ENST00000537706 NCR3O14931 201 aa5.08□□□□□ -1.6
USP28-205ENST00000537706 DNAL4O96015 105 aa5.08□□□□□ -1.6
USP28-205ENST00000537706 Q8NDZ9 215 aa5.08□□□□□ -1.6
USP28-205ENST00000537706 A0A1B0GX51 115 aa5.07□□□□□ -1.6
USP28-205ENST00000537706 MRPL55Q7Z7F7 128 aaKnown RBP5.07□□□□□ -1.6
USP28-205ENST00000537706 FAM240AA0A1B0GVK7 77 aa5.07□□□□□ -1.6
USP28-205ENST00000537706 S100A7L2Q5SY68 101 aa5.07□□□□□ -1.6
USP28-205ENST00000537706 BAALC-AS2P0C853 105 aa5.06□□□□□ -1.6
USP28-205ENST00000537706 PCP4P48539 62 aa5.06□□□□□ -1.6
USP28-205ENST00000537706 PCOTHQ58A44 107 aa5.06□□□□□ -1.6
USP28-205ENST00000537706 C3orf22Q8N5N4 141 aa5.06□□□□□ -1.6
USP28-205ENST00000537706 SIGMAR1Q99720 223 aa5.06□□□□□ -1.6
USP28-205ENST00000537706 USH2AO75445 5202 aa5.06□□□□□ -1.6
USP28-205ENST00000537706 SPINK1P00995 79 aa5.05□□□□□ -1.6
USP28-205ENST00000537706 IGLV6-57P01721 117 aa5.05□□□□□ -1.6
USP28-205ENST00000537706 LINC00167Q96N53 147 aa5.05□□□□□ -1.6
USP28-205ENST00000537706 KRTAP4-16G5E9R7 235 aaPredicted RBP5.05□□□□□ -1.6
USP28-205ENST00000537706 SCGB1A1P11684 91 aa5.04□□□□□ -1.6
USP28-205ENST00000537706 XAGE1AQ9HD64 81 aa5.04□□□□□ -1.6
USP28-205ENST00000537706 VPREB1P12018 145 aa5.03□□□□□ -1.6
USP28-205ENST00000537706 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
USP28-205ENST00000537706 C6orf99Q4VX62 202 aa5.03□□□□□ -1.6
USP28-205ENST00000537706 ORMDL1Q9P0S3 153 aa5.03□□□□□ -1.6
USP28-205ENST00000537706 SNCGO76070 127 aa5.03□□□□□ -1.6
USP28-205ENST00000537706 TRAV23DV6A0A075B6W5 121 aa5.02□□□□□ -1.61
USP28-205ENST00000537706 TRBV10-3A0A0K0K1G6 114 aa5.02□□□□□ -1.61
USP28-205ENST00000537706 RPL37AP8A6NKH3 93 aa5.02□□□□□ -1.61
USP28-205ENST00000537706 OBSCN-AS1Q96MR7 158 aa5.02□□□□□ -1.61
USP28-205ENST00000537706 M0R378 163 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 ACYP1P07311 99 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 LINC00575Q6W349 94 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 KRTAP13-1Q8IUC0 172 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 TRBV7-6A0A0J9YX20 115 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 MT-ATP8P03928 68 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 Q8NBF4 154 aa5.01□□□□□ -1.61
USP28-205ENST00000537706 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
USP28-205ENST00000537706 ZNF73O43830 326 aaPredicted RBP4.99□□□□□ -1.61
USP28-205ENST00000537706 hADV29S1A0JD25 119 aa4.99□□□□□ -1.61
USP28-205ENST00000537706 TMEM256-PLSCR3K7ERE1 68 aa4.99□□□□□ -1.61
USP28-205ENST00000537706 RPS29P62273 56 aaKnown RBP4.99□□□□□ -1.61
USP28-205ENST00000537706 C21orf62-AS1Q17RA5 79 aa4.99□□□□□ -1.61
USP28-205ENST00000537706 FAM19A1Q7Z5A9 133 aa4.99□□□□□ -1.61
USP28-205ENST00000537706 H3BQ85 93 aa4.98□□□□□ -1.61
USP28-205ENST00000537706 ELOF1P60002 83 aaKnown RBP4.98□□□□□ -1.61
USP28-205ENST00000537706 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
USP28-205ENST00000537706 NKAPP1Q8N9T2 125 aa4.98□□□□□ -1.61
USP28-205ENST00000537706 ZNF706Q9Y5V0 76 aaPredicted RBP4.98□□□□□ -1.61
USP28-205ENST00000537706 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
USP28-205ENST00000537706 IGLV5-37A0A075B6J1 123 aa4.97□□□□□ -1.61
USP28-205ENST00000537706 COX7BP24311 80 aa4.97□□□□□ -1.61
USP28-205ENST00000537706 C14orf132Q9NPU4 83 aa4.97□□□□□ -1.61
USP28-205ENST00000537706 JMJD7-PLA2G4BH0Y9G9 81 aa4.97□□□□□ -1.61
USP28-205ENST00000537706 PRLHP81277 87 aa4.97□□□□□ -1.61
USP28-205ENST00000537706 GAGE2AQ6NT46 116 aa4.96□□□□□ -1.62
USP28-205ENST00000537706 Q6Q795 121 aa4.95□□□□□ -1.62
USP28-205ENST00000537706 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.95□□□□□ -1.62
USP28-205ENST00000537706 Q6ZQY7 126 aa4.95□□□□□ -1.62
USP28-205ENST00000537706 Q8N377 158 aa4.95□□□□□ -1.62
USP28-205ENST00000537706 KCNQ1DNQ9H478 68 aa4.95□□□□□ -1.62
USP28-205ENST00000537706 GHRHP01286 108 aa4.95□□□□□ -1.62
USP28-205ENST00000537706 TRBV7-7A0A0K0K1E9 115 aa4.94□□□□□ -1.62
USP28-205ENST00000537706 PRYO14603 147 aa4.94□□□□□ -1.62
USP28-205ENST00000537706 LINC00643Q86TS7 51 aa4.94□□□□□ -1.62
USP28-205ENST00000537706 SMCR5Q8TEV8 140 aa4.94□□□□□ -1.62
USP28-205ENST00000537706 CCKP06307 115 aa4.93□□□□□ -1.62
USP28-205ENST00000537706 SPRR4Q96PI1 79 aa4.93□□□□□ -1.62
USP28-205ENST00000537706 HIGD2AQ9BW72 106 aa4.92□□□□□ -1.62
USP28-205ENST00000537706 LOC110117498A0A087WWA1 95 aa4.91□□□□□ -1.62
USP28-205ENST00000537706 A0A1B0GV72 72 aa4.91□□□□□ -1.62
USP28-205ENST00000537706 SPRR1AP35321 89 aa4.91□□□□□ -1.62
USP28-205ENST00000537706 RBM3P98179 157 aaKnown RBP4.91□□□□□ -1.62
USP28-205ENST00000537706 IMUPQ9GZP8 106 aa4.91□□□□□ -1.62
USP28-205ENST00000537706 LAMTOR3Q9UHA4 124 aa4.91□□□□□ -1.62
USP28-205ENST00000537706 PDE6GP18545 87 aa4.9□□□□□ -1.62
USP28-205ENST00000537706 Q6ZQT0 140 aa4.9□□□□□ -1.62
USP28-205ENST00000537706 Q6ZRX8 168 aa4.9□□□□□ -1.62
USP28-205ENST00000537706 DHRS4-AS1Q9P1J3 65 aa4.9□□□□□ -1.62
USP28-205ENST00000537706 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.63
USP28-205ENST00000537706 Q6JHZ5 121 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms