RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 LCE6AA0A183 80 aa13.67□□□□□ -0.22
TRIM3-214ENST00000536344 A8MUN3 132 aa13.67□□□□□ -0.22
TRIM3-214ENST00000536344 SERTAD4-AS1Q5TG53 156 aa13.67□□□□□ -0.22
TRIM3-214ENST00000536344 K7EQZ3 153 aa13.65□□□□□ -0.22
TRIM3-214ENST00000536344 NUPR2A6NF83 97 aa13.65□□□□□ -0.22
TRIM3-214ENST00000536344 DSCR10P59022 87 aa13.63□□□□□ -0.23
TRIM3-214ENST00000536344 DEFB116Q30KQ4 102 aa13.62□□□□□ -0.23
TRIM3-214ENST00000536344 VPS13DQ5THJ4 4388 aa13.61□□□□□ -0.23
TRIM3-214ENST00000536344 RPL37AP8A6NKH3 93 aa13.61□□□□□ -0.23
TRIM3-214ENST00000536344 IGLV5-48A0A075B6I7 105 aa13.6□□□□□ -0.23
TRIM3-214ENST00000536344 ETDCA0A1B0GVM5 59 aa13.6□□□□□ -0.23
TRIM3-214ENST00000536344 IGKV2-24A0A0C4DH68 120 aa13.6□□□□□ -0.23
TRIM3-214ENST00000536344 A0A0G2JQZ4 141 aa13.59□□□□□ -0.23
TRIM3-214ENST00000536344 A0A1W2PNN7 141 aa13.59□□□□□ -0.23
TRIM3-214ENST00000536344 NBDYA0A0U1RRE5 68 aa13.57□□□□□ -0.24
TRIM3-214ENST00000536344 NKAPP1Q8N9T2 125 aa13.57□□□□□ -0.24
TRIM3-214ENST00000536344 C1orf137Q5JT78 98 aa13.56□□□□□ -0.24
TRIM3-214ENST00000536344 KRTAP7-1Q8IUC3 87 aa13.55□□□□□ -0.24
TRIM3-214ENST00000536344 C7orf33Q8WU49 177 aa13.55□□□□□ -0.24
TRIM3-214ENST00000536344 DNAH2Q9P225 4427 aa13.54□□□□□ -0.24
TRIM3-214ENST00000536344 Q5VV11 94 aa13.52□□□□□ -0.24
TRIM3-214ENST00000536344 SRRM2Q9UQ35 2752 aaKnown RBP13.52□□□□□ -0.25
TRIM3-214ENST00000536344 Q9BRP9 147 aa13.52□□□□□ -0.25
TRIM3-214ENST00000536344 CHTF8P0CG12 524 aa13.51□□□□□ -0.25
TRIM3-214ENST00000536344 CYP4F30PQ9H0H9 118 aa13.51□□□□□ -0.25
TRIM3-214ENST00000536344 A0A096LNI7 61 aa13.5□□□□□ -0.25
TRIM3-214ENST00000536344 WFDC13Q8IUB5 93 aa13.49□□□□□ -0.25
TRIM3-214ENST00000536344 Q8NBF4 154 aa13.49□□□□□ -0.25
TRIM3-214ENST00000536344 TLX1NBP0CAT3 122 aa13.49□□□□□ -0.25
TRIM3-214ENST00000536344 TNP2Q05952 138 aa13.48□□□□□ -0.25
TRIM3-214ENST00000536344 KCNQ1DNQ9H478 68 aa13.48□□□□□ -0.25
TRIM3-214ENST00000536344 HCG22E2RYF7 251 aa13.46□□□□□ -0.25
TRIM3-214ENST00000536344 Q6ZRN7 208 aaPredicted RBP13.44□□□□□ -0.26
TRIM3-214ENST00000536344 LINC00208Q96KT6 92 aa13.43□□□□□ -0.26
TRIM3-214ENST00000536344 CHKB-CPT1BH3BT56 60 aa13.42□□□□□ -0.26
TRIM3-214ENST00000536344 C16orf90A8MZG2 172 aa13.42□□□□□ -0.26
TRIM3-214ENST00000536344 LY6G6CO95867 125 aa13.42□□□□□ -0.26
TRIM3-214ENST00000536344 Q6ZRX8 168 aa13.42□□□□□ -0.26
TRIM3-214ENST00000536344 SPRR4Q96PI1 79 aa13.42□□□□□ -0.26
TRIM3-214ENST00000536344 SPTSSBQ8NFR3 76 aa13.41□□□□□ -0.26
TRIM3-214ENST00000536344 HECTD4Q9Y4D8 3996 aa13.4□□□□□ -0.26
TRIM3-214ENST00000536344 CD164Q04900 197 aa13.4□□□□□ -0.26
TRIM3-214ENST00000536344 MRPL55Q7Z7F7 128 aaKnown RBP13.4□□□□□ -0.26
TRIM3-214ENST00000536344 CNBPP62633 177 aaKnown RBP13.4□□□□□ -0.27
TRIM3-214ENST00000536344 RPL37AP61513 92 aaKnown RBP13.39□□□□□ -0.27
TRIM3-214ENST00000536344 Q8N9P0 234 aaPredicted RBP13.38□□□□□ -0.27
TRIM3-214ENST00000536344 IGLV1-50A0A075B6I6 118 aa13.38□□□□□ -0.27
TRIM3-214ENST00000536344 PANO1I0J062 215 aa13.37□□□□□ -0.27
TRIM3-214ENST00000536344 KRTAP4-16G5E9R7 235 aaPredicted RBP13.37□□□□□ -0.27
TRIM3-214ENST00000536344 PRR15LQ9BU68 103 aa13.37□□□□□ -0.27
TRIM3-214ENST00000536344 HYDINQ4G0P3 5121 aa13.37□□□□□ -0.27
TRIM3-214ENST00000536344 UBE2BP63146 152 aa13.35□□□□□ -0.27
TRIM3-214ENST00000536344 DHRS4-AS1Q9P1J3 65 aa13.35□□□□□ -0.27
TRIM3-214ENST00000536344 PLA2G2DQ9UNK4 145 aa13.34□□□□□ -0.27
TRIM3-214ENST00000536344 C14orf177Q52M58 125 aa13.33□□□□□ -0.27
TRIM3-214ENST00000536344 A0A1B0GW54 56 aa13.33□□□□□ -0.28
TRIM3-214ENST00000536344 LCA10Q71F78 164 aa13.33□□□□□ -0.28
TRIM3-214ENST00000536344 MP68P56378 58 aa13.33□□□□□ -0.28
TRIM3-214ENST00000536344 PHF5AQ7RTV0 110 aaKnown RBP13.33□□□□□ -0.28
TRIM3-214ENST00000536344 NDUFB1O75438 58 aa13.32□□□□□ -0.28
TRIM3-214ENST00000536344 LINC00476Q8WZB0 136 aa13.32□□□□□ -0.28
TRIM3-214ENST00000536344 KRTAP11-1Q8IUC1 163 aa13.32□□□□□ -0.28
TRIM3-214ENST00000536344 C9orf163Q8N9P6 203 aa13.31□□□□□ -0.28
TRIM3-214ENST00000536344 IGLV5-37A0A075B6J1 123 aa13.3□□□□□ -0.28
TRIM3-214ENST00000536344 RBM12B-AS1Q9P1G2 102 aa13.3□□□□□ -0.28
TRIM3-214ENST00000536344 A0A087WTM6 91 aa13.29□□□□□ -0.28
TRIM3-214ENST00000536344 UBE2AP49459 152 aa13.28□□□□□ -0.28
TRIM3-214ENST00000536344 PRLHP81277 87 aa13.28□□□□□ -0.28
TRIM3-214ENST00000536344 KRTAP21-3Q3LHN1 58 aa13.28□□□□□ -0.28
TRIM3-214ENST00000536344 A0A087WSZ3 146 aa13.27□□□□□ -0.28
TRIM3-214ENST00000536344 Q6ZR54 194 aa13.27□□□□□ -0.28
TRIM3-214ENST00000536344 KTN1-AS1Q86SY8 53 aa13.27□□□□□ -0.29
TRIM3-214ENST00000536344 DNAH6Q9C0G6 4158 aa13.26□□□□□ -0.29
TRIM3-214ENST00000536344 H0Y9P7 68 aa13.26□□□□□ -0.29
TRIM3-214ENST00000536344 IGFL1Q6UW32 110 aa13.26□□□□□ -0.29
TRIM3-214ENST00000536344 REG3GQ6UW15 175 aa13.26□□□□□ -0.29
TRIM3-214ENST00000536344 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.25□□□□□ -0.29
TRIM3-214ENST00000536344 SPRR1AP35321 89 aa13.24□□□□□ -0.29
TRIM3-214ENST00000536344 WWC2-AS2Q96NR7 200 aa13.22□□□□□ -0.29
TRIM3-214ENST00000536344 LIMD2Q9BT23 127 aa13.22□□□□□ -0.29
TRIM3-214ENST00000536344 A6NED7 52 aa13.22□□□□□ -0.29
TRIM3-214ENST00000536344 DNAH17Q9UFH2 4485 aa13.22□□□□□ -0.29
TRIM3-214ENST00000536344 C1orf134Q5TEV5 83 aa13.21□□□□□ -0.29
TRIM3-214ENST00000536344 KRTAP29-1A8MX34 341 aaPredicted RBP13.21□□□□□ -0.29
TRIM3-214ENST00000536344 RTL8CO15255 209 aa13.19□□□□□ -0.3
TRIM3-214ENST00000536344 FRAS1Q86XX4 4008 aa13.19□□□□□ -0.3
TRIM3-214ENST00000536344 SPANXA2-OT1Q8N9U9 137 aa13.16□□□□□ -0.3
TRIM3-214ENST00000536344 CASC2Q6XLA1 102 aa13.16□□□□□ -0.3
TRIM3-214ENST00000536344 COA5Q86WW8 74 aa13.15□□□□□ -0.3
TRIM3-214ENST00000536344 A6NN06 94 aa13.14□□□□□ -0.31
TRIM3-214ENST00000536344 DNAH11Q96DT5 4516 aa13.13□□□□□ -0.31
TRIM3-214ENST00000536344 DNAH8Q96JB1 4490 aa13.13□□□□□ -0.31
TRIM3-214ENST00000536344 ATP11AUNQ6ZP68 121 aa13.13□□□□□ -0.31
TRIM3-214ENST00000536344 Q75L30 129 aa13.12□□□□□ -0.31
TRIM3-214ENST00000536344 IGLV5-52A0A0A0MRZ9 124 aa13.11□□□□□ -0.31
TRIM3-214ENST00000536344 DNAH5Q8TE73 4624 aa13.1□□□□□ -0.31
TRIM3-214ENST00000536344 SPACA4Q8TDM5 124 aa13.1□□□□□ -0.31
TRIM3-214ENST00000536344 PCOTHQ58A44 107 aa13.09□□□□□ -0.31
TRIM3-214ENST00000536344 SPAG11AQ6PDA7 123 aa13.08□□□□□ -0.32
TRIM3-214ENST00000536344 LOC101927531A0A1B0GV80 90 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms