RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SRRM2Q9UQ35 2752 aaKnown RBP8.36□□□□□ -1.07
VPS33B-202ENST00000535906 FAM236DA0A1B0GTK5 79 aa8.36□□□□□ -1.07
VPS33B-202ENST00000535906 FAM236CP0DP71 79 aa8.36□□□□□ -1.07
VPS33B-202ENST00000535906 HIGD2AQ9BW72 106 aa8.36□□□□□ -1.07
VPS33B-202ENST00000535906 OXTP01178 125 aa8.35□□□□□ -1.07
VPS33B-202ENST00000535906 OCR1Q9BZK8 76 aa8.34□□□□□ -1.07
VPS33B-202ENST00000535906 NDUFC1O43677 76 aa8.33□□□□□ -1.08
VPS33B-202ENST00000535906 F8WEM9 126 aa8.32□□□□□ -1.08
VPS33B-202ENST00000535906 LINC00476Q8WZB0 136 aa8.32□□□□□ -1.08
VPS33B-202ENST00000535906 LINC00474Q9P2X8 69 aa8.32□□□□□ -1.08
VPS33B-202ENST00000535906 EPM2AB3EWF7 344 aa8.32□□□□□ -1.08
VPS33B-202ENST00000535906 PKIGQ9Y2B9 76 aa8.32□□□□□ -1.08
VPS33B-202ENST00000535906 A0A087WTM6 91 aa8.31□□□□□ -1.08
VPS33B-202ENST00000535906 A0A0G2JQZ4 141 aa8.31□□□□□ -1.08
VPS33B-202ENST00000535906 TMEM254Q8TBM7 123 aa8.31□□□□□ -1.08
VPS33B-202ENST00000535906 DNAH2Q9P225 4427 aa8.31□□□□□ -1.08
VPS33B-202ENST00000535906 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.31□□□□□ -1.08
VPS33B-202ENST00000535906 HECTD4Q9Y4D8 3996 aa8.3□□□□□ -1.08
VPS33B-202ENST00000535906 TGP01266 2768 aa8.3□□□□□ -1.08
VPS33B-202ENST00000535906 Q6ZR54 194 aa8.3□□□□□ -1.08
VPS33B-202ENST00000535906 H0Y9J4 135 aa8.29□□□□□ -1.08
VPS33B-202ENST00000535906 DSCR10P59022 87 aa8.29□□□□□ -1.08
VPS33B-202ENST00000535906 IGFL1Q6UW32 110 aa8.29□□□□□ -1.08
VPS33B-202ENST00000535906 SPACA4Q8TDM5 124 aa8.29□□□□□ -1.08
VPS33B-202ENST00000535906 IGLV8-61A0A075B6I0 122 aa8.28□□□□□ -1.08
VPS33B-202ENST00000535906 SERP1Q9Y6X1 66 aa8.28□□□□□ -1.08
VPS33B-202ENST00000535906 FBN3Q75N90 2809 aa8.27□□□□□ -1.09
VPS33B-202ENST00000535906 UBE2AP49459 152 aa8.27□□□□□ -1.09
VPS33B-202ENST00000535906 A0A0U1RQV1 116 aa8.26□□□□□ -1.09
VPS33B-202ENST00000535906 K7EQZ3 153 aa8.24□□□□□ -1.09
VPS33B-202ENST00000535906 RTL8CO15255 209 aa8.24□□□□□ -1.09
VPS33B-202ENST00000535906 ATP5EP56381 51 aaPredicted RBP8.24□□□□□ -1.09
VPS33B-202ENST00000535906 KRTAP13-1Q8IUC0 172 aa8.24□□□□□ -1.09
VPS33B-202ENST00000535906 SPRR1BP22528 89 aa8.23□□□□□ -1.09
VPS33B-202ENST00000535906 FAM30AQ9NZY2 134 aa8.23□□□□□ -1.09
VPS33B-202ENST00000535906 DNAH17Q9UFH2 4485 aa8.22□□□□□ -1.09
VPS33B-202ENST00000535906 Q5XG85 94 aa8.21□□□□□ -1.09
VPS33B-202ENST00000535906 A0A087WSZ3 146 aa8.21□□□□□ -1.1
VPS33B-202ENST00000535906 LCE6AA0A183 80 aa8.21□□□□□ -1.1
VPS33B-202ENST00000535906 C1orf134Q5TEV5 83 aa8.2□□□□□ -1.1
VPS33B-202ENST00000535906 LY6G6CO95867 125 aa8.2□□□□□ -1.1
VPS33B-202ENST00000535906 HCG22E2RYF7 251 aa8.19□□□□□ -1.1
VPS33B-202ENST00000535906 C4orf26Q17RF5 130 aa8.17□□□□□ -1.1
VPS33B-202ENST00000535906 DEFB116Q30KQ4 102 aa8.17□□□□□ -1.1
VPS33B-202ENST00000535906 FRAS1Q86XX4 4008 aa8.17□□□□□ -1.1
VPS33B-202ENST00000535906 IGLV5-52A0A0A0MRZ9 124 aa8.17□□□□□ -1.1
VPS33B-202ENST00000535906 DNAH8Q96JB1 4490 aa8.16□□□□□ -1.1
VPS33B-202ENST00000535906 PLAC8Q9NZF1 115 aa8.15□□□□□ -1.1
VPS33B-202ENST00000535906 PSORS1C2Q9UIG4 136 aa8.15□□□□□ -1.1
VPS33B-202ENST00000535906 C5orf47Q569G3 176 aa8.14□□□□□ -1.11
VPS33B-202ENST00000535906 SMIM26A0A096LP01 95 aa8.13□□□□□ -1.11
VPS33B-202ENST00000535906 DNAH6Q9C0G6 4158 aa8.12□□□□□ -1.11
VPS33B-202ENST00000535906 ZCCHC13Q8WW36 166 aaKnown RBP8.12□□□□□ -1.11
VPS33B-202ENST00000535906 RPL37AP61513 92 aaKnown RBP8.11□□□□□ -1.11
VPS33B-202ENST00000535906 HRCT1Q6UXD1 115 aa8.11□□□□□ -1.11
VPS33B-202ENST00000535906 WFDC13Q8IUB5 93 aa8.1□□□□□ -1.11
VPS33B-202ENST00000535906 LINC00472Q9H8W2 130 aa8.1□□□□□ -1.11
VPS33B-202ENST00000535906 IGLV9-49A0A0B4J1Y8 123 aa8.1□□□□□ -1.11
VPS33B-202ENST00000535906 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
VPS33B-202ENST00000535906 WWC2-AS2Q96NR7 200 aa8.09□□□□□ -1.11
VPS33B-202ENST00000535906 LINC00483Q53H64 154 aa8.09□□□□□ -1.11
VPS33B-202ENST00000535906 KRTAP29-1A8MX34 341 aaPredicted RBP8.08□□□□□ -1.12
VPS33B-202ENST00000535906 PRR15Q8IV56 129 aa8.08□□□□□ -1.12
VPS33B-202ENST00000535906 A8MWP4 228 aa8.08□□□□□ -1.12
VPS33B-202ENST00000535906 ZNF861PO60384 105 aa8.07□□□□□ -1.12
VPS33B-202ENST00000535906 KRTAP10-2P60368 255 aa8.07□□□□□ -1.12
VPS33B-202ENST00000535906 DNAH5Q8TE73 4624 aa8.07□□□□□ -1.12
VPS33B-202ENST00000535906 HYDINQ4G0P3 5121 aa8.06□□□□□ -1.12
VPS33B-202ENST00000535906 DNAH11Q96DT5 4516 aa8.06□□□□□ -1.12
VPS33B-202ENST00000535906 KRTAP21-3Q3LHN1 58 aa8.05□□□□□ -1.12
VPS33B-202ENST00000535906 ANAPC11Q9NYG5 84 aa8.05□□□□□ -1.12
VPS33B-202ENST00000535906 CASC2Q6XLA1 102 aa8.04□□□□□ -1.12
VPS33B-202ENST00000535906 ZNF706Q9Y5V0 76 aaPredicted RBP8.04□□□□□ -1.12
VPS33B-202ENST00000535906 FAM229BQ4G0N7 80 aa8.03□□□□□ -1.12
VPS33B-202ENST00000535906 MP68P56378 58 aa8.03□□□□□ -1.12
VPS33B-202ENST00000535906 ALMS1Q8TCU4 4167 aa8.02□□□□□ -1.13
VPS33B-202ENST00000535906 CIRBP-AS1Q8TBR5 109 aa8.02□□□□□ -1.13
VPS33B-202ENST00000535906 MOBPQ13875 183 aa8.01□□□□□ -1.13
VPS33B-202ENST00000535906 PKD1P98161 4303 aa8.01□□□□□ -1.13
VPS33B-202ENST00000535906 NDUFB1O75438 58 aa8.01□□□□□ -1.13
VPS33B-202ENST00000535906 IGLV7-43P04211 117 aa8.01□□□□□ -1.13
VPS33B-202ENST00000535906 FAT2Q9NYQ8 4349 aa8□□□□□ -1.13
VPS33B-202ENST00000535906 hDV103S1A0JD37 113 aa7.99□□□□□ -1.13
VPS33B-202ENST00000535906 TRAV22A0A0B4J277 110 aa7.98□□□□□ -1.13
VPS33B-202ENST00000535906 Q96NJ1 140 aa7.98□□□□□ -1.13
VPS33B-202ENST00000535906 LINC00208Q96KT6 92 aa7.98□□□□□ -1.13
VPS33B-202ENST00000535906 MMP24-AS1A0A0U1RRL7 71 aa7.97□□□□□ -1.13
VPS33B-202ENST00000535906 H3BPC8 53 aa7.97□□□□□ -1.13
VPS33B-202ENST00000535906 C1orf64Q8NEQ6 169 aa7.97□□□□□ -1.13
VPS33B-202ENST00000535906 CYP4F30PQ9H0H9 118 aa7.97□□□□□ -1.13
VPS33B-202ENST00000535906 H0Y9P7 68 aa7.97□□□□□ -1.13
VPS33B-202ENST00000535906 KRTAP10-1P60331 282 aa7.96□□□□□ -1.14
VPS33B-202ENST00000535906 Q6ZSA8 131 aa7.94□□□□□ -1.14
VPS33B-202ENST00000535906 MPLKIPQ8TAP9 179 aa7.94□□□□□ -1.14
VPS33B-202ENST00000535906 LRP1BQ9NZR2 4599 aa7.93□□□□□ -1.14
VPS33B-202ENST00000535906 LINC00336Q6ZUF6 198 aa7.93□□□□□ -1.14
VPS33B-202ENST00000535906 PRR4Q16378 134 aa7.92□□□□□ -1.14
VPS33B-202ENST00000535906 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
VPS33B-202ENST00000535906 SPANXA2-OT1Q8N9U9 137 aa7.9□□□□□ -1.14
VPS33B-202ENST00000535906 C8orf17Q9NRJ1 99 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 261.8 ms