RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 BVES-AS1Q5T3Y7 98 aa7.14□□□□□ -1.27
CLSTN3-205ENST00000535452 ATP11AUNQ6ZP68 121 aa7.14□□□□□ -1.27
CLSTN3-205ENST00000535452 CLEC2BQ92478 149 aa7.14□□□□□ -1.27
CLSTN3-205ENST00000535452 SNHG12Q9BXW3 62 aa7.14□□□□□ -1.27
CLSTN3-205ENST00000535452 Q6ZQY7 126 aa7.13□□□□□ -1.27
CLSTN3-205ENST00000535452 A0A0G2JQZ4 141 aa7.11□□□□□ -1.27
CLSTN3-205ENST00000535452 LINC00575Q6W349 94 aa7.11□□□□□ -1.27
CLSTN3-205ENST00000535452 PPDPFLQ8WWR9 84 aa7.11□□□□□ -1.27
CLSTN3-205ENST00000535452 C12orf57Q99622 126 aa7.11□□□□□ -1.27
CLSTN3-205ENST00000535452 GHRHP01286 108 aa7.1□□□□□ -1.27
CLSTN3-205ENST00000535452 S100A6P06703 90 aa7.1□□□□□ -1.27
CLSTN3-205ENST00000535452 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.1□□□□□ -1.27
CLSTN3-205ENST00000535452 SS18L2Q9UHA2 77 aa7.1□□□□□ -1.27
CLSTN3-205ENST00000535452 TRBV7-7A0A0K0K1E9 115 aa7.09□□□□□ -1.27
CLSTN3-205ENST00000535452 MT1HP80294 61 aa7.09□□□□□ -1.27
CLSTN3-205ENST00000535452 OCIAD2Q56VL3 154 aa7.09□□□□□ -1.27
CLSTN3-205ENST00000535452 HIST1H4GQ99525 98 aa7.09□□□□□ -1.27
CLSTN3-205ENST00000535452 CRCT1Q9UGL9 99 aa7.09□□□□□ -1.27
CLSTN3-205ENST00000535452 LST1O00453 97 aa7.08□□□□□ -1.28
CLSTN3-205ENST00000535452 Q6Q795 121 aa7.08□□□□□ -1.28
CLSTN3-205ENST00000535452 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
CLSTN3-205ENST00000535452 IGFL1Q6UW32 110 aa7.05□□□□□ -1.28
CLSTN3-205ENST00000535452 RAB37Q96AX2 223 aa7.05□□□□□ -1.28
CLSTN3-205ENST00000535452 OBSCN-AS1Q96MR7 158 aa7.05□□□□□ -1.28
CLSTN3-205ENST00000535452 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
CLSTN3-205ENST00000535452 TRBV20-1A0A075B6N2 111 aa7.03□□□□□ -1.28
CLSTN3-205ENST00000535452 Q75L30 129 aa7.02□□□□□ -1.29
CLSTN3-205ENST00000535452 Q96NJ1 140 aa7.01□□□□□ -1.29
CLSTN3-205ENST00000535452 HIST1H2BLQ99880 126 aa7.01□□□□□ -1.29
CLSTN3-205ENST00000535452 H0YGX0 51 aa7□□□□□ -1.29
CLSTN3-205ENST00000535452 KRTAP19-2Q3LHN2 52 aa7□□□□□ -1.29
CLSTN3-205ENST00000535452 HIST3H2BBQ8N257 126 aa7□□□□□ -1.29
CLSTN3-205ENST00000535452 S100A1P23297 94 aa6.99□□□□□ -1.29
CLSTN3-205ENST00000535452 KRTAP10-6P60371 365 aaPredicted RBP6.99□□□□□ -1.29
CLSTN3-205ENST00000535452 H3BUT2 72 aa6.98□□□□□ -1.29
CLSTN3-205ENST00000535452 TEN1Q86WV5 123 aa6.98□□□□□ -1.29
CLSTN3-205ENST00000535452 TMEM238LA0A1B0GVL6 79 aa6.96□□□□□ -1.3
CLSTN3-205ENST00000535452 A6NJY4 79 aa6.96□□□□□ -1.3
CLSTN3-205ENST00000535452 COX8AP10176 69 aa6.96□□□□□ -1.3
CLSTN3-205ENST00000535452 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.3
CLSTN3-205ENST00000535452 FABP2P12104 132 aa6.95□□□□□ -1.3
CLSTN3-205ENST00000535452 NDUFV3P56181 108 aaKnown RBP6.95□□□□□ -1.3
CLSTN3-205ENST00000535452 H3BMG7 143 aa6.93□□□□□ -1.3
CLSTN3-205ENST00000535452 DLEU1O43261 78 aa6.93□□□□□ -1.3
CLSTN3-205ENST00000535452 DNAL4O96015 105 aa6.93□□□□□ -1.3
CLSTN3-205ENST00000535452 SIGMAR1Q99720 223 aa6.93□□□□□ -1.3
CLSTN3-205ENST00000535452 A0A087WSZ3 146 aa6.92□□□□□ -1.3
CLSTN3-205ENST00000535452 A0A1B0GX51 115 aa6.92□□□□□ -1.3
CLSTN3-205ENST00000535452 A0A0B4J2C4 111 aa6.91□□□□□ -1.3
CLSTN3-205ENST00000535452 FAM236DA0A1B0GTK5 79 aa6.91□□□□□ -1.3
CLSTN3-205ENST00000535452 FAM236CP0DP71 79 aa6.91□□□□□ -1.3
CLSTN3-205ENST00000535452 H3BQ85 93 aa6.9□□□□□ -1.3
CLSTN3-205ENST00000535452 CFC1P0CG37 223 aa6.89□□□□□ -1.31
CLSTN3-205ENST00000535452 VAMP8Q9BV40 100 aa6.89□□□□□ -1.31
CLSTN3-205ENST00000535452 HIGD1BQ9P298 99 aa6.89□□□□□ -1.31
CLSTN3-205ENST00000535452 C14orf144Q96I85 54 aa6.88□□□□□ -1.31
CLSTN3-205ENST00000535452 PRO1854Q9UHT4 67 aa6.88□□□□□ -1.31
CLSTN3-205ENST00000535452 PAM16Q9Y3D7 125 aa6.88□□□□□ -1.31
CLSTN3-205ENST00000535452 COX6CP09669 75 aa6.87□□□□□ -1.31
CLSTN3-205ENST00000535452 SPATA45Q537H7 98 aa6.87□□□□□ -1.31
CLSTN3-205ENST00000535452 ANKRD29Q8N6D5 301 aa6.87□□□□□ -1.31
CLSTN3-205ENST00000535452 C20orf166-AS1Q96NR2 134 aa6.87□□□□□ -1.31
CLSTN3-205ENST00000535452 PSMB2P49721 201 aa6.86□□□□□ -1.31
CLSTN3-205ENST00000535452 A8MUU9 505 aa6.85□□□□□ -1.31
CLSTN3-205ENST00000535452 LINC00313P59037 77 aa6.85□□□□□ -1.31
CLSTN3-205ENST00000535452 CEND1Q8N111 149 aa6.85□□□□□ -1.31
CLSTN3-205ENST00000535452 ORMDL1Q9P0S3 153 aa6.85□□□□□ -1.31
CLSTN3-205ENST00000535452 RBM12B-AS1Q9P1G2 102 aa6.85□□□□□ -1.31
CLSTN3-205ENST00000535452 IGKV4-1P06312 121 aa6.84□□□□□ -1.31
CLSTN3-205ENST00000535452 DSCR10P59022 87 aa6.84□□□□□ -1.31
CLSTN3-205ENST00000535452 TMEM256-PLSCR3K7ERE1 68 aa6.82□□□□□ -1.32
CLSTN3-205ENST00000535452 TRACP01848 142 aa6.82□□□□□ -1.32
CLSTN3-205ENST00000535452 FAM218AQ96MZ4 157 aa6.82□□□□□ -1.32
CLSTN3-205ENST00000535452 TRBV7-4A0A0J9YYF1 115 aa6.81□□□□□ -1.32
CLSTN3-205ENST00000535452 MTURNQ8N3F0 131 aa6.81□□□□□ -1.32
CLSTN3-205ENST00000535452 A0A1B0GV72 72 aa6.78□□□□□ -1.32
CLSTN3-205ENST00000535452 TRIAP1O43715 76 aa6.77□□□□□ -1.33
CLSTN3-205ENST00000535452 CCKP06307 115 aa6.77□□□□□ -1.33
CLSTN3-205ENST00000535452 C21orf62-AS1Q17RA5 79 aa6.77□□□□□ -1.33
CLSTN3-205ENST00000535452 VPS25Q9BRG1 176 aa6.77□□□□□ -1.33
CLSTN3-205ENST00000535452 IGHV6-1A0A0B4J1U7 121 aa6.76□□□□□ -1.33
CLSTN3-205ENST00000535452 A0A1W2PNM2 257 aa6.76□□□□□ -1.33
CLSTN3-205ENST00000535452 C2orf91Q6ZV80 131 aa6.75□□□□□ -1.33
CLSTN3-205ENST00000535452 DSCR8Q96T75 97 aa6.75□□□□□ -1.33
CLSTN3-205ENST00000535452 SCGB1C2P0DMR2 95 aa6.74□□□□□ -1.33
CLSTN3-205ENST00000535452 HSD52Q0P140 79 aa6.74□□□□□ -1.33
CLSTN3-205ENST00000535452 C8orf87E5RJ46 101 aa6.73□□□□□ -1.33
CLSTN3-205ENST00000535452 FXYD2P54710 66 aa6.73□□□□□ -1.33
CLSTN3-205ENST00000535452 UBE2V1Q13404 147 aa6.72□□□□□ -1.33
CLSTN3-205ENST00000535452 NDUFB1O75438 58 aa6.71□□□□□ -1.34
CLSTN3-205ENST00000535452 RBM3P98179 157 aaKnown RBP6.71□□□□□ -1.34
CLSTN3-205ENST00000535452 DEFB116Q30KQ4 102 aa6.71□□□□□ -1.34
CLSTN3-205ENST00000535452 LYRM7Q5U5X0 104 aa6.71□□□□□ -1.34
CLSTN3-205ENST00000535452 J3KT08 172 aa6.7□□□□□ -1.34
CLSTN3-205ENST00000535452 FLGP20930 4061 aaPredicted RBP6.7□□□□□ -1.34
CLSTN3-205ENST00000535452 LINC00472Q9H8W2 130 aa6.67□□□□□ -1.34
CLSTN3-205ENST00000535452 A0A1B0GVX0 72 aa6.66□□□□□ -1.34
CLSTN3-205ENST00000535452 C9JAW5 83 aa6.66□□□□□ -1.34
CLSTN3-205ENST00000535452 K7ERJ3 54 aa6.66□□□□□ -1.34
CLSTN3-205ENST00000535452 LINC00846Q9NV44 126 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms