RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 NHP2Q9NX24 153 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-204ENST00000535313 UQCR10Q9UDW1 63 aa8.86□□□□□ -0.99
CLSTN3-204ENST00000535313 C9orf92A6NGG3 77 aa8.85□□□□□ -0.99
CLSTN3-204ENST00000535313 CEND1Q8N111 149 aa8.85□□□□□ -0.99
CLSTN3-204ENST00000535313 CFC1BP0CG36 223 aa8.84□□□□□ -0.99
CLSTN3-204ENST00000535313 CFC1P0CG37 223 aa8.84□□□□□ -0.99
CLSTN3-204ENST00000535313 Q5XG85 94 aa8.83□□□□□ -1
CLSTN3-204ENST00000535313 SMIM11BQ8TCY0 68 aa8.83□□□□□ -1
CLSTN3-204ENST00000535313 PCOTHQ58A44 107 aa8.82□□□□□ -1
CLSTN3-204ENST00000535313 HSD52Q0P140 79 aa8.81□□□□□ -1
CLSTN3-204ENST00000535313 VAMP3Q15836 100 aa8.8□□□□□ -1
CLSTN3-204ENST00000535313 A0A0G2JQZ4 141 aa8.79□□□□□ -1
CLSTN3-204ENST00000535313 C1orf195Q5TG92 126 aa8.79□□□□□ -1
CLSTN3-204ENST00000535313 IGLV8-61A0A075B6I0 122 aa8.78□□□□□ -1
CLSTN3-204ENST00000535313 A0A0B4J2C4 111 aa8.78□□□□□ -1
CLSTN3-204ENST00000535313 F8WEM9 126 aa8.77□□□□□ -1.01
CLSTN3-204ENST00000535313 TCL1BO95988 128 aa8.76□□□□□ -1.01
CLSTN3-204ENST00000535313 BVES-AS1Q5T3Y7 98 aa8.75□□□□□ -1.01
CLSTN3-204ENST00000535313 KRTAP9-6A0A140TA67 174 aa8.74□□□□□ -1.01
CLSTN3-204ENST00000535313 K7ERJ3 54 aa8.74□□□□□ -1.01
CLSTN3-204ENST00000535313 LINC00575Q6W349 94 aa8.74□□□□□ -1.01
CLSTN3-204ENST00000535313 hADV29S1A0JD25 119 aa8.73□□□□□ -1.01
CLSTN3-204ENST00000535313 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
CLSTN3-204ENST00000535313 Q6ZQY7 126 aa8.72□□□□□ -1.01
CLSTN3-204ENST00000535313 TMEM238LA0A1B0GVL6 79 aa8.71□□□□□ -1.02
CLSTN3-204ENST00000535313 A6NJY4 79 aa8.71□□□□□ -1.02
CLSTN3-204ENST00000535313 RAB37Q96AX2 223 aa8.71□□□□□ -1.02
CLSTN3-204ENST00000535313 PRO1854Q9UHT4 67 aa8.71□□□□□ -1.02
CLSTN3-204ENST00000535313 Q6JHZ5 121 aa8.7□□□□□ -1.02
CLSTN3-204ENST00000535313 KRTAP19-2Q3LHN2 52 aa8.69□□□□□ -1.02
CLSTN3-204ENST00000535313 TSTD3H0UI37 97 aa8.68□□□□□ -1.02
CLSTN3-204ENST00000535313 RPL37P61927 97 aaKnown RBP8.68□□□□□ -1.02
CLSTN3-204ENST00000535313 LCE2DQ5TA82 110 aaPredicted RBP8.67□□□□□ -1.02
CLSTN3-204ENST00000535313 CLEC2BQ92478 149 aa8.67□□□□□ -1.02
CLSTN3-204ENST00000535313 FAM218AQ96MZ4 157 aa8.67□□□□□ -1.02
CLSTN3-204ENST00000535313 TRIAP1O43715 76 aa8.66□□□□□ -1.02
CLSTN3-204ENST00000535313 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.66□□□□□ -1.02
CLSTN3-204ENST00000535313 TRBV7-7A0A0K0K1E9 115 aa8.65□□□□□ -1.02
CLSTN3-204ENST00000535313 MT1HP80294 61 aa8.65□□□□□ -1.02
CLSTN3-204ENST00000535313 OCIAD2Q56VL3 154 aa8.65□□□□□ -1.02
CLSTN3-204ENST00000535313 IGFL1Q6UW32 110 aa8.65□□□□□ -1.02
CLSTN3-204ENST00000535313 PPDPFLQ8WWR9 84 aa8.63□□□□□ -1.03
CLSTN3-204ENST00000535313 SNHG12Q9BXW3 62 aa8.63□□□□□ -1.03
CLSTN3-204ENST00000535313 FSIP2Q5CZC0 6907 aa8.61□□□□□ -1.03
CLSTN3-204ENST00000535313 M0R143 59 aa8.6□□□□□ -1.03
CLSTN3-204ENST00000535313 SNCGO76070 127 aa8.58□□□□□ -1.04
CLSTN3-204ENST00000535313 COX6B2Q6YFQ2 88 aa8.58□□□□□ -1.04
CLSTN3-204ENST00000535313 H0YGX0 51 aa8.57□□□□□ -1.04
CLSTN3-204ENST00000535313 H3BUT2 72 aa8.57□□□□□ -1.04
CLSTN3-204ENST00000535313 LST1O00453 97 aa8.56□□□□□ -1.04
CLSTN3-204ENST00000535313 NAA38Q9BRA0 125 aaKnown RBP8.56□□□□□ -1.04
CLSTN3-204ENST00000535313 OBSCN-AS1Q96MR7 158 aa8.55□□□□□ -1.04
CLSTN3-204ENST00000535313 M0R2T5 61 aa8.54□□□□□ -1.04
CLSTN3-204ENST00000535313 PSMB2P49721 201 aa8.53□□□□□ -1.04
CLSTN3-204ENST00000535313 BATFQ16520 125 aa8.53□□□□□ -1.04
CLSTN3-204ENST00000535313 ATP11AUNQ6ZP68 121 aa8.53□□□□□ -1.04
CLSTN3-204ENST00000535313 Q75L30 129 aa8.52□□□□□ -1.05
CLSTN3-204ENST00000535313 SS18L2Q9UHA2 77 aa8.52□□□□□ -1.05
CLSTN3-204ENST00000535313 A0A1B0GX51 115 aa8.51□□□□□ -1.05
CLSTN3-204ENST00000535313 TAX1BP3O14907 124 aa8.5□□□□□ -1.05
CLSTN3-204ENST00000535313 LORP23490 312 aaPredicted RBP8.5□□□□□ -1.05
CLSTN3-204ENST00000535313 KRTAP10-6P60371 365 aaPredicted RBP8.5□□□□□ -1.05
CLSTN3-204ENST00000535313 Q6Q795 121 aa8.5□□□□□ -1.05
CLSTN3-204ENST00000535313 CRCT1Q9UGL9 99 aa8.5□□□□□ -1.05
CLSTN3-204ENST00000535313 NDUFV3P56181 108 aaKnown RBP8.49□□□□□ -1.05
CLSTN3-204ENST00000535313 GHRHP01286 108 aa8.48□□□□□ -1.05
CLSTN3-204ENST00000535313 TEN1Q86WV5 123 aa8.48□□□□□ -1.05
CLSTN3-204ENST00000535313 Q96NJ1 140 aa8.47□□□□□ -1.05
CLSTN3-204ENST00000535313 COX6CP09669 75 aa8.46□□□□□ -1.06
CLSTN3-204ENST00000535313 FLGP20930 4061 aaPredicted RBP8.45□□□□□ -1.06
CLSTN3-204ENST00000535313 H3BMG7 143 aa8.45□□□□□ -1.06
CLSTN3-204ENST00000535313 A0A087WSZ3 146 aa8.44□□□□□ -1.06
CLSTN3-204ENST00000535313 TRACP01848 142 aa8.44□□□□□ -1.06
CLSTN3-204ENST00000535313 FABP2P12104 132 aa8.44□□□□□ -1.06
CLSTN3-204ENST00000535313 C9orf118A6NHY6 69 aa8.43□□□□□ -1.06
CLSTN3-204ENST00000535313 PCP4L1A6NKN8 68 aa8.43□□□□□ -1.06
CLSTN3-204ENST00000535313 SCGB1C2P0DMR2 95 aa8.43□□□□□ -1.06
CLSTN3-204ENST00000535313 C20orf166-AS1Q96NR2 134 aa8.4□□□□□ -1.06
CLSTN3-204ENST00000535313 ORMDL1Q9P0S3 153 aa8.4□□□□□ -1.06
CLSTN3-204ENST00000535313 DNAL4O96015 105 aa8.39□□□□□ -1.07
CLSTN3-204ENST00000535313 A0A1W2PPM0 123 aa8.38□□□□□ -1.07
CLSTN3-204ENST00000535313 A8MUU9 505 aa8.37□□□□□ -1.07
CLSTN3-204ENST00000535313 A0A1W2PNM2 257 aa8.35□□□□□ -1.07
CLSTN3-204ENST00000535313 ATXN8Q156A1 80 aa8.35□□□□□ -1.07
CLSTN3-204ENST00000535313 COL5A1-AS1Q5SY13 56 aa8.35□□□□□ -1.07
CLSTN3-204ENST00000535313 SIGMAR1Q99720 223 aa8.35□□□□□ -1.07
CLSTN3-204ENST00000535313 H3BQ85 93 aa8.34□□□□□ -1.07
CLSTN3-204ENST00000535313 DSCR10P59022 87 aa8.34□□□□□ -1.07
CLSTN3-204ENST00000535313 ANKRD29Q8N6D5 301 aa8.34□□□□□ -1.07
CLSTN3-204ENST00000535313 TRBV20-1A0A075B6N2 111 aa8.33□□□□□ -1.08
CLSTN3-204ENST00000535313 A0A1B0GV72 72 aa8.33□□□□□ -1.08
CLSTN3-204ENST00000535313 UBE2V1Q13404 147 aa8.33□□□□□ -1.08
CLSTN3-204ENST00000535313 TMEM256-PLSCR3K7ERE1 68 aa8.32□□□□□ -1.08
CLSTN3-204ENST00000535313 BAALC-AS2P0C853 105 aa8.32□□□□□ -1.08
CLSTN3-204ENST00000535313 TRBV7-4A0A0J9YYF1 115 aa8.31□□□□□ -1.08
CLSTN3-204ENST00000535313 LYRM7Q5U5X0 104 aa8.31□□□□□ -1.08
CLSTN3-204ENST00000535313 IGKV4-1P06312 121 aa8.3□□□□□ -1.08
CLSTN3-204ENST00000535313 LINC00313P59037 77 aa8.3□□□□□ -1.08
CLSTN3-204ENST00000535313 MTURNQ8N3F0 131 aa8.3□□□□□ -1.08
CLSTN3-204ENST00000535313 C9JAW5 83 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms