RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 AKAP13Q12802 2813 aa7.09□□□□□ -1.28
AMBRA1-211ENST00000533727 MGAQ8IWI9 3026 aa7.08□□□□□ -1.28
AMBRA1-211ENST00000533727 A0A0G2JQZ4 141 aa7.07□□□□□ -1.28
AMBRA1-211ENST00000533727 FP248Q71RG6 208 aaPredicted RBP7.07□□□□□ -1.28
AMBRA1-211ENST00000533727 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
AMBRA1-211ENST00000533727 C9orf92A6NGG3 77 aa7.06□□□□□ -1.28
AMBRA1-211ENST00000533727 TEX15Q9BXT5 2789 aa7.06□□□□□ -1.28
AMBRA1-211ENST00000533727 IGLV5-48A0A075B6I7 105 aa7.06□□□□□ -1.28
AMBRA1-211ENST00000533727 IGLV7-46A0A075B6I9 117 aa7.06□□□□□ -1.28
AMBRA1-211ENST00000533727 SZT2Q5T011 3432 aa7.05□□□□□ -1.28
AMBRA1-211ENST00000533727 GCN1Q92616 2671 aaKnown RBP7.05□□□□□ -1.28
AMBRA1-211ENST00000533727 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
AMBRA1-211ENST00000533727 Q75L30 129 aa7.04□□□□□ -1.28
AMBRA1-211ENST00000533727 CFAP54Q96N23 3096 aa7.04□□□□□ -1.28
AMBRA1-211ENST00000533727 LINC01554Q52M75 96 aa7.03□□□□□ -1.28
AMBRA1-211ENST00000533727 PRR26Q8N8Z3 221 aa7.03□□□□□ -1.28
AMBRA1-211ENST00000533727 FAM104AQ969W3 186 aa7.02□□□□□ -1.29
AMBRA1-211ENST00000533727 Q6ZR54 194 aa7.02□□□□□ -1.29
AMBRA1-211ENST00000533727 H3BS24 57 aa7.02□□□□□ -1.29
AMBRA1-211ENST00000533727 Q5VSD8 79 aa7.01□□□□□ -1.29
AMBRA1-211ENST00000533727 DSPP15924 2871 aaKnown RBP7.01□□□□□ -1.29
AMBRA1-211ENST00000533727 Q6ZSA8 131 aa7□□□□□ -1.29
AMBRA1-211ENST00000533727 VCANP13611 3396 aa6.99□□□□□ -1.29
AMBRA1-211ENST00000533727 KRTAP1-5Q9BYS1 174 aa6.99□□□□□ -1.29
AMBRA1-211ENST00000533727 Q8N9P0 234 aaPredicted RBP6.99□□□□□ -1.29
AMBRA1-211ENST00000533727 SPRR1AP35321 89 aa6.98□□□□□ -1.29
AMBRA1-211ENST00000533727 VPS13AQ96RL7 3174 aa6.97□□□□□ -1.29
AMBRA1-211ENST00000533727 COL6A3P12111 3177 aa6.96□□□□□ -1.3
AMBRA1-211ENST00000533727 LINC01558Q9Y6Z2 57 aa6.96□□□□□ -1.3
AMBRA1-211ENST00000533727 KRTAP10-1P60331 282 aa6.95□□□□□ -1.3
AMBRA1-211ENST00000533727 SPRR1BP22528 89 aa6.95□□□□□ -1.3
AMBRA1-211ENST00000533727 SPEGQ15772 3267 aa6.94□□□□□ -1.3
AMBRA1-211ENST00000533727 KRTAP26-1Q6PEX3 210 aa6.94□□□□□ -1.3
AMBRA1-211ENST00000533727 MAP1AP78559 2803 aaPredicted RBP6.93□□□□□ -1.3
AMBRA1-211ENST00000533727 OXTP01178 125 aa6.93□□□□□ -1.3
AMBRA1-211ENST00000533727 PRAC1Q96KF2 57 aa6.93□□□□□ -1.3
AMBRA1-211ENST00000533727 Q5VV11 94 aa6.92□□□□□ -1.3
AMBRA1-211ENST00000533727 LAMA1P25391 3075 aa6.92□□□□□ -1.3
AMBRA1-211ENST00000533727 SEC61BP60468 96 aaKnown RBP6.92□□□□□ -1.3
AMBRA1-211ENST00000533727 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
AMBRA1-211ENST00000533727 LUZP6Q538Z0 58 aa6.9□□□□□ -1.3
AMBRA1-211ENST00000533727 NOTCH1P46531 2555 aa6.9□□□□□ -1.3
AMBRA1-211ENST00000533727 KMT2BQ9UMN6 2715 aaPredicted RBP6.9□□□□□ -1.31
AMBRA1-211ENST00000533727 USP34Q70CQ2 3546 aa6.89□□□□□ -1.31
AMBRA1-211ENST00000533727 Q8N1X5 172 aa6.89□□□□□ -1.31
AMBRA1-211ENST00000533727 CELSR3Q9NYQ7 3312 aa6.89□□□□□ -1.31
AMBRA1-211ENST00000533727 A0A0D9SG42 100 aa6.88□□□□□ -1.31
AMBRA1-211ENST00000533727 ITPR2Q14571 2701 aa6.88□□□□□ -1.31
AMBRA1-211ENST00000533727 NBEAQ8NFP9 2946 aa6.85□□□□□ -1.31
AMBRA1-211ENST00000533727 A0A1B0GU33 70 aa6.84□□□□□ -1.31
AMBRA1-211ENST00000533727 HRES1P13985 223 aa6.84□□□□□ -1.31
AMBRA1-211ENST00000533727 NSD1Q96L73 2696 aaPredicted RBP6.84□□□□□ -1.32
AMBRA1-211ENST00000533727 CSAG1Q6PB30 78 aa6.82□□□□□ -1.32
AMBRA1-211ENST00000533727 SPINK7P58062 85 aa6.82□□□□□ -1.32
AMBRA1-211ENST00000533727 MYO15AQ9UKN7 3530 aa6.81□□□□□ -1.32
AMBRA1-211ENST00000533727 MMP24-AS1A0A0U1RRL7 71 aa6.8□□□□□ -1.32
AMBRA1-211ENST00000533727 M0R2T5 61 aa6.8□□□□□ -1.32
AMBRA1-211ENST00000533727 FLNCQ14315 2725 aa6.8□□□□□ -1.32
AMBRA1-211ENST00000533727 UBR5O95071 2799 aaPredicted RBP6.8□□□□□ -1.32
AMBRA1-211ENST00000533727 LINC00483Q53H64 154 aa6.79□□□□□ -1.32
AMBRA1-211ENST00000533727 EYSQ5T1H1 3165 aa6.79□□□□□ -1.32
AMBRA1-211ENST00000533727 TNRC18O15417 2968 aaPredicted RBP6.79□□□□□ -1.32
AMBRA1-211ENST00000533727 ZCCHC13Q8WW36 166 aaKnown RBP6.79□□□□□ -1.32
AMBRA1-211ENST00000533727 FRYLO94915 3013 aa6.79□□□□□ -1.32
AMBRA1-211ENST00000533727 FRYQ5TBA9 3013 aa6.78□□□□□ -1.32
AMBRA1-211ENST00000533727 Q6ZRN7 208 aaPredicted RBP6.78□□□□□ -1.32
AMBRA1-211ENST00000533727 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
AMBRA1-211ENST00000533727 NBEAL1Q6ZS30 2694 aa6.77□□□□□ -1.33
AMBRA1-211ENST00000533727 DMAC1Q96GE9 116 aa6.76□□□□□ -1.33
AMBRA1-211ENST00000533727 Q8NDZ9 215 aa6.76□□□□□ -1.33
AMBRA1-211ENST00000533727 FREM2Q5SZK8 3169 aa6.74□□□□□ -1.33
AMBRA1-211ENST00000533727 FLG2Q5D862 2391 aaPredicted RBP6.72□□□□□ -1.33
AMBRA1-211ENST00000533727 RPS29P62273 56 aaKnown RBP6.72□□□□□ -1.33
AMBRA1-211ENST00000533727 ITPR1Q14643 2758 aa6.72□□□□□ -1.33
AMBRA1-211ENST00000533727 A0A0A0MQY5 61 aa6.71□□□□□ -1.34
AMBRA1-211ENST00000533727 LINC00472Q9H8W2 130 aa6.7□□□□□ -1.34
AMBRA1-211ENST00000533727 DMXL2Q8TDJ6 3036 aa6.7□□□□□ -1.34
AMBRA1-211ENST00000533727 BOD1L1Q8NFC6 3051 aa6.7□□□□□ -1.34
AMBRA1-211ENST00000533727 ASB16-AS1Q495Z4 193 aa6.69□□□□□ -1.34
AMBRA1-211ENST00000533727 PANO1I0J062 215 aa6.68□□□□□ -1.34
AMBRA1-211ENST00000533727 REV3LO60673 3130 aa6.68□□□□□ -1.34
AMBRA1-211ENST00000533727 KRTAP4-16G5E9R7 235 aaPredicted RBP6.66□□□□□ -1.34
AMBRA1-211ENST00000533727 ATMQ13315 3056 aa6.65□□□□□ -1.34
AMBRA1-211ENST00000533727 SPTBN5Q9NRC6 3674 aaKnown RBP6.65□□□□□ -1.34
AMBRA1-211ENST00000533727 Q5W150 140 aa6.65□□□□□ -1.34
AMBRA1-211ENST00000533727 APCP25054 2843 aa6.63□□□□□ -1.35
AMBRA1-211ENST00000533727 COL12A1Q99715 3063 aa6.62□□□□□ -1.35
AMBRA1-211ENST00000533727 S4R3F8 94 aa6.62□□□□□ -1.35
AMBRA1-211ENST00000533727 DMXL1Q9Y485 3027 aa6.6□□□□□ -1.35
AMBRA1-211ENST00000533727 STAB2Q8WWQ8 2551 aa6.6□□□□□ -1.35
AMBRA1-211ENST00000533727 UTP20O75691 2785 aaKnown RBP6.6□□□□□ -1.35
AMBRA1-211ENST00000533727 CAMK2N1Q7Z7J9 78 aa6.59□□□□□ -1.35
AMBRA1-211ENST00000533727 ZZEF1O43149 2961 aa6.59□□□□□ -1.35
AMBRA1-211ENST00000533727 TENM4Q6N022 2769 aa6.58□□□□□ -1.36
AMBRA1-211ENST00000533727 A0A087X002 238 aa6.57□□□□□ -1.36
AMBRA1-211ENST00000533727 ROMO1P60602 79 aa6.57□□□□□ -1.36
AMBRA1-211ENST00000533727 TACC2O95359 2948 aa6.57□□□□□ -1.36
AMBRA1-211ENST00000533727 ADGRG4Q8IZF6 3080 aa6.57□□□□□ -1.36
AMBRA1-211ENST00000533727 A6NN06 94 aa6.56□□□□□ -1.36
AMBRA1-211ENST00000533727 RPL37P61927 97 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms