RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 IGKV2-24A0A0C4DH68 120 aa10.39□□□□□ -0.75
CTSB-228ENST00000533455 KRTAP29-1A8MX34 341 aaPredicted RBP10.39□□□□□ -0.75
CTSB-228ENST00000533455 NDUFB1O75438 58 aa10.39□□□□□ -0.75
CTSB-228ENST00000533455 HUWE1Q7Z6Z7 4374 aaKnown RBP10.39□□□□□ -0.75
CTSB-228ENST00000533455 SPRR1BP22528 89 aa10.38□□□□□ -0.75
CTSB-228ENST00000533455 UBE2AP49459 152 aa10.38□□□□□ -0.75
CTSB-228ENST00000533455 Q1T7F1 81 aa10.38□□□□□ -0.75
CTSB-228ENST00000533455 DEFB116Q30KQ4 102 aa10.38□□□□□ -0.75
CTSB-228ENST00000533455 WFDC13Q8IUB5 93 aa10.38□□□□□ -0.75
CTSB-228ENST00000533455 H0Y9J4 135 aa10.36□□□□□ -0.75
CTSB-228ENST00000533455 MP68P56378 58 aa10.36□□□□□ -0.75
CTSB-228ENST00000533455 KRTAP1-5Q9BYS1 174 aa10.36□□□□□ -0.75
CTSB-228ENST00000533455 TRAV22A0A0B4J277 110 aa10.34□□□□□ -0.75
CTSB-228ENST00000533455 NOTCH1P46531 2555 aa10.34□□□□□ -0.75
CTSB-228ENST00000533455 RPL37AP61513 92 aaKnown RBP10.33□□□□□ -0.76
CTSB-228ENST00000533455 PRB2P02812 416 aaPredicted RBP10.33□□□□□ -0.76
CTSB-228ENST00000533455 H3BPC8 53 aa10.32□□□□□ -0.76
CTSB-228ENST00000533455 PRR15Q8IV56 129 aa10.32□□□□□ -0.76
CTSB-228ENST00000533455 K7EIL1 84 aa10.31□□□□□ -0.76
CTSB-228ENST00000533455 KRTAP11-1Q8IUC1 163 aa10.31□□□□□ -0.76
CTSB-228ENST00000533455 C14orf177Q52M58 125 aa10.31□□□□□ -0.76
CTSB-228ENST00000533455 PHF5AQ7RTV0 110 aaKnown RBP10.31□□□□□ -0.76
CTSB-228ENST00000533455 LRCOL1A6NCL2 159 aa10.3□□□□□ -0.76
CTSB-228ENST00000533455 CASC2Q6XLA1 102 aa10.3□□□□□ -0.76
CTSB-228ENST00000533455 LINC00472Q9H8W2 130 aa10.3□□□□□ -0.76
CTSB-228ENST00000533455 A8MWP4 228 aa10.29□□□□□ -0.76
CTSB-228ENST00000533455 LINC00208Q96KT6 92 aa10.29□□□□□ -0.76
CTSB-228ENST00000533455 NBEAL1Q6ZS30 2694 aa10.29□□□□□ -0.76
CTSB-228ENST00000533455 DNAH10Q8IVF4 4471 aa10.29□□□□□ -0.76
CTSB-228ENST00000533455 PRR4Q16378 134 aa10.28□□□□□ -0.76
CTSB-228ENST00000533455 SPANXA2-OT1Q8N9U9 137 aa10.28□□□□□ -0.76
CTSB-228ENST00000533455 PKIGQ9Y2B9 76 aa10.28□□□□□ -0.76
CTSB-228ENST00000533455 H0Y9P7 68 aa10.27□□□□□ -0.77
CTSB-228ENST00000533455 CHTF8P0CG12 524 aa10.27□□□□□ -0.77
CTSB-228ENST00000533455 B9D2Q9BPU9 175 aa10.25□□□□□ -0.77
CTSB-228ENST00000533455 DNAH9Q9NYC9 4486 aa10.23□□□□□ -0.77
CTSB-228ENST00000533455 MGAM2Q2M2H8 2515 aa10.22□□□□□ -0.77
CTSB-228ENST00000533455 UBE2DNLQ8IWF7 75 aa10.22□□□□□ -0.77
CTSB-228ENST00000533455 C9orf163Q8N9P6 203 aa10.22□□□□□ -0.77
CTSB-228ENST00000533455 V9GYY9 64 aa10.22□□□□□ -0.77
CTSB-228ENST00000533455 APLNQ9ULZ1 77 aa10.21□□□□□ -0.77
CTSB-228ENST00000533455 KRTAP13-1Q8IUC0 172 aa10.21□□□□□ -0.78
CTSB-228ENST00000533455 MMP24-AS1A0A0U1RRL7 71 aa10.2□□□□□ -0.78
CTSB-228ENST00000533455 C1orf195Q5TG92 126 aa10.2□□□□□ -0.78
CTSB-228ENST00000533455 MDFIQ99750 246 aa10.2□□□□□ -0.78
CTSB-228ENST00000533455 PSPHP1O15172 72 aa10.17□□□□□ -0.78
CTSB-228ENST00000533455 DYNC2H1Q8NCM8 4307 aaKnown RBP10.17□□□□□ -0.78
CTSB-228ENST00000533455 ASB16-AS1Q495Z4 193 aa10.13□□□□□ -0.79
CTSB-228ENST00000533455 Q96NJ1 140 aa10.12□□□□□ -0.79
CTSB-228ENST00000533455 LYSTQ99698 3801 aa10.12□□□□□ -0.79
CTSB-228ENST00000533455 A8MUN3 132 aa10.12□□□□□ -0.79
CTSB-228ENST00000533455 PANO1I0J062 215 aa10.11□□□□□ -0.79
CTSB-228ENST00000533455 MOBPQ13875 183 aa10.1□□□□□ -0.79
CTSB-228ENST00000533455 Q5VV11 94 aa10.09□□□□□ -0.79
CTSB-228ENST00000533455 Q8N9P0 234 aaPredicted RBP10.09□□□□□ -0.79
CTSB-228ENST00000533455 Q6ZRN7 208 aaPredicted RBP10.09□□□□□ -0.79
CTSB-228ENST00000533455 IGLV7-46A0A075B6I9 117 aa10.08□□□□□ -0.8
CTSB-228ENST00000533455 NBDYA0A0U1RRE5 68 aa10.08□□□□□ -0.8
CTSB-228ENST00000533455 LINC00483Q53H64 154 aa10.08□□□□□ -0.8
CTSB-228ENST00000533455 LIMD2Q9BT23 127 aa10.08□□□□□ -0.8
CTSB-228ENST00000533455 TP53AIP1Q9HCN2 124 aa10.08□□□□□ -0.8
CTSB-228ENST00000533455 SRRM2Q9UQ35 2752 aaKnown RBP10.07□□□□□ -0.8
CTSB-228ENST00000533455 SPACA4Q8TDM5 124 aa10.06□□□□□ -0.8
CTSB-228ENST00000533455 C8orf17Q9NRJ1 99 aa10.05□□□□□ -0.8
CTSB-228ENST00000533455 IGLV9-49A0A0B4J1Y8 123 aa10.04□□□□□ -0.8
CTSB-228ENST00000533455 Q6ZR54 194 aa10.04□□□□□ -0.8
CTSB-228ENST00000533455 COA5Q86WW8 74 aa10.03□□□□□ -0.8
CTSB-228ENST00000533455 DNHD1Q96M86 4753 aa10.03□□□□□ -0.8
CTSB-228ENST00000533455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.02□□□□□ -0.8
CTSB-228ENST00000533455 STAB2Q8WWQ8 2551 aa10.02□□□□□ -0.81
CTSB-228ENST00000533455 COL7A1Q02388 2944 aa10.01□□□□□ -0.81
CTSB-228ENST00000533455 ZNF706Q9Y5V0 76 aaPredicted RBP10.01□□□□□ -0.81
CTSB-228ENST00000533455 A0A1B0GVX0 72 aa10□□□□□ -0.81
CTSB-228ENST00000533455 CD164Q04900 197 aa9.99□□□□□ -0.81
CTSB-228ENST00000533455 TENM2Q9NT68 2774 aa9.99□□□□□ -0.81
CTSB-228ENST00000533455 WWC2-AS2Q96NR7 200 aa9.98□□□□□ -0.81
CTSB-228ENST00000533455 PRR15LQ9BU68 103 aa9.98□□□□□ -0.81
CTSB-228ENST00000533455 DNAH7Q8WXX0 4024 aa9.98□□□□□ -0.81
CTSB-228ENST00000533455 LOC101927531A0A1B0GV80 90 aa9.97□□□□□ -0.81
CTSB-228ENST00000533455 PCOTHQ58A44 107 aa9.97□□□□□ -0.81
CTSB-228ENST00000533455 PLECQ15149 4684 aaKnown RBP9.97□□□□□ -0.81
CTSB-228ENST00000533455 CHKB-CPT1BH3BT56 60 aa9.96□□□□□ -0.81
CTSB-228ENST00000533455 NUPR2A6NF83 97 aa9.95□□□□□ -0.82
CTSB-228ENST00000533455 Q75L30 129 aa9.95□□□□□ -0.82
CTSB-228ENST00000533455 IGHV6-1A0A0B4J1U7 121 aa9.95□□□□□ -0.82
CTSB-228ENST00000533455 PMAIP1Q13794 54 aa9.95□□□□□ -0.82
CTSB-228ENST00000533455 MRPL34Q9BQ48 92 aaKnown RBP9.94□□□□□ -0.82
CTSB-228ENST00000533455 IGLV5-52A0A0A0MRZ9 124 aa9.92□□□□□ -0.82
CTSB-228ENST00000533455 CDK2AP2O75956 126 aa9.92□□□□□ -0.82
CTSB-228ENST00000533455 A8MU10 97 aa9.92□□□□□ -0.82
CTSB-228ENST00000533455 A0A087WTM6 91 aa9.91□□□□□ -0.82
CTSB-228ENST00000533455 PSORS1C2Q9UIG4 136 aa9.91□□□□□ -0.82
CTSB-228ENST00000533455 CSMD3Q7Z407 3707 aa9.9□□□□□ -0.82
CTSB-228ENST00000533455 NDUFS5O43920 106 aa9.9□□□□□ -0.82
CTSB-228ENST00000533455 VPS13DQ5THJ4 4388 aa9.9□□□□□ -0.82
CTSB-228ENST00000533455 ZNF861PO60384 105 aa9.89□□□□□ -0.83
CTSB-228ENST00000533455 PLAC8Q9NZF1 115 aa9.89□□□□□ -0.83
CTSB-228ENST00000533455 LINC01558Q9Y6Z2 57 aa9.89□□□□□ -0.83
CTSB-228ENST00000533455 PRKDCP78527 4128 aaKnown RBP9.88□□□□□ -0.83
CTSB-228ENST00000533455 MEGF8Q7Z7M0 2845 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms