RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 PLNP26678 52 aa3.85□□□□□ -1.79
NXF1-215ENST00000533440 HERVK_113P61574 105 aa3.85□□□□□ -1.79
NXF1-215ENST00000533440 Q96NJ1 140 aa3.85□□□□□ -1.79
NXF1-215ENST00000533440 LITAFQ99732 161 aa3.85□□□□□ -1.79
NXF1-215ENST00000533440 FAM236DA0A1B0GTK5 79 aa3.84□□□□□ -1.79
NXF1-215ENST00000533440 H0Y8G0 127 aa3.84□□□□□ -1.79
NXF1-215ENST00000533440 APOC3P02656 99 aa3.84□□□□□ -1.79
NXF1-215ENST00000533440 FAM236CP0DP71 79 aa3.84□□□□□ -1.79
NXF1-215ENST00000533440 NDUFA5Q16718 116 aa3.84□□□□□ -1.79
NXF1-215ENST00000533440 SVBPQ8N300 66 aa3.84□□□□□ -1.79
NXF1-215ENST00000533440 MPLKIPQ8TAP9 179 aa3.84□□□□□ -1.79
NXF1-215ENST00000533440 TRBV7-7A0A0K0K1E9 115 aa3.83□□□□□ -1.8
NXF1-215ENST00000533440 A0A1B0GWB2 263 aa3.83□□□□□ -1.8
NXF1-215ENST00000533440 DPM2O94777 84 aa3.83□□□□□ -1.8
NXF1-215ENST00000533440 IGFL1Q6UW32 110 aa3.83□□□□□ -1.8
NXF1-215ENST00000533440 LINC00518Q8N0U6 118 aa3.83□□□□□ -1.8
NXF1-215ENST00000533440 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
NXF1-215ENST00000533440 HSBP1O75506 76 aa3.82□□□□□ -1.8
NXF1-215ENST00000533440 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
NXF1-215ENST00000533440 KRTAP16-1A8MUX0 517 aa3.81□□□□□ -1.8
NXF1-215ENST00000533440 E9PLD3 99 aa3.81□□□□□ -1.8
NXF1-215ENST00000533440 TIMM17BO60830 172 aa3.81□□□□□ -1.8
NXF1-215ENST00000533440 IGKCP01834 107 aa3.81□□□□□ -1.8
NXF1-215ENST00000533440 HRES1P13985 223 aa3.81□□□□□ -1.8
NXF1-215ENST00000533440 YPEL4Q96NS1 127 aa3.81□□□□□ -1.8
NXF1-215ENST00000533440 F8WEM9 126 aa3.8□□□□□ -1.8
NXF1-215ENST00000533440 LEPROTL1O95214 131 aa3.8□□□□□ -1.8
NXF1-215ENST00000533440 Q6JHZ5 121 aa3.8□□□□□ -1.8
NXF1-215ENST00000533440 CLEC2BQ92478 149 aa3.8□□□□□ -1.8
NXF1-215ENST00000533440 PMCHL2Q9BQD1 86 aa3.8□□□□□ -1.8
NXF1-215ENST00000533440 RBM12B-AS1Q9P1G2 102 aa3.8□□□□□ -1.8
NXF1-215ENST00000533440 A4D1N5 150 aa3.79□□□□□ -1.8
NXF1-215ENST00000533440 LST1O00453 97 aa3.79□□□□□ -1.8
NXF1-215ENST00000533440 NHP2Q9NX24 153 aaKnown RBP3.79□□□□□ -1.8
NXF1-215ENST00000533440 HSPB8Q9UJY1 196 aa3.78□□□□□ -1.8
NXF1-215ENST00000533440 SERF1AO75920 110 aa3.77□□□□□ -1.81
NXF1-215ENST00000533440 TRGC2P03986 189 aa3.77□□□□□ -1.81
NXF1-215ENST00000533440 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
NXF1-215ENST00000533440 TRAV13-2A0A0B4J235 113 aa3.76□□□□□ -1.81
NXF1-215ENST00000533440 ZNF815PA8K554 130 aa3.76□□□□□ -1.81
NXF1-215ENST00000533440 OCIAD2Q56VL3 154 aa3.76□□□□□ -1.81
NXF1-215ENST00000533440 NOTCH2NLQ7Z3S9 236 aa3.76□□□□□ -1.81
NXF1-215ENST00000533440 A6NDN8 102 aa3.74□□□□□ -1.81
NXF1-215ENST00000533440 FABP4P15090 132 aa3.74□□□□□ -1.81
NXF1-215ENST00000533440 SMIM11BQ8TCY0 68 aa3.74□□□□□ -1.81
NXF1-215ENST00000533440 A8MWP4 228 aa3.73□□□□□ -1.81
NXF1-215ENST00000533440 DSCR10P59022 87 aa3.73□□□□□ -1.81
NXF1-215ENST00000533440 Q6ZQY7 126 aa3.73□□□□□ -1.81
NXF1-215ENST00000533440 SLC7A5P1Q8MH63 180 aa3.73□□□□□ -1.81
NXF1-215ENST00000533440 Q8N9P0 234 aaPredicted RBP3.73□□□□□ -1.81
NXF1-215ENST00000533440 SVIPQ8NHG7 77 aa3.73□□□□□ -1.81
NXF1-215ENST00000533440 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
NXF1-215ENST00000533440 TTTY13Q9BZ97 58 aa3.73□□□□□ -1.81
NXF1-215ENST00000533440 LINC00575Q6W349 94 aa3.72□□□□□ -1.81
NXF1-215ENST00000533440 Q6ZVH6 145 aa3.72□□□□□ -1.81
NXF1-215ENST00000533440 SS18L2Q9UHA2 77 aa3.72□□□□□ -1.81
NXF1-215ENST00000533440 KMT2DO14686 5537 aa3.72□□□□□ -1.81
NXF1-215ENST00000533440 IFITM1P13164 125 aa3.71□□□□□ -1.82
NXF1-215ENST00000533440 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
NXF1-215ENST00000533440 MTURNQ8N3F0 131 aa3.71□□□□□ -1.82
NXF1-215ENST00000533440 COPS9Q8WXC6 57 aa3.71□□□□□ -1.82
NXF1-215ENST00000533440 hADV29S1A0JD25 119 aa3.7□□□□□ -1.82
NXF1-215ENST00000533440 COLCA2A8K830 154 aa3.7□□□□□ -1.82
NXF1-215ENST00000533440 SYS1-DBNDD2H3BUS1 97 aa3.7□□□□□ -1.82
NXF1-215ENST00000533440 H3BUT2 72 aa3.69□□□□□ -1.82
NXF1-215ENST00000533440 SCGB1D1O95968 90 aa3.69□□□□□ -1.82
NXF1-215ENST00000533440 LINC00313P59037 77 aa3.69□□□□□ -1.82
NXF1-215ENST00000533440 VAMP3Q15836 100 aa3.69□□□□□ -1.82
NXF1-215ENST00000533440 MUSTN1Q8IVN3 82 aa3.69□□□□□ -1.82
NXF1-215ENST00000533440 PPDPFLQ8WWR9 84 aa3.69□□□□□ -1.82
NXF1-215ENST00000533440 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
NXF1-215ENST00000533440 LINC01545Q5VT33 79 aa3.68□□□□□ -1.82
NXF1-215ENST00000533440 PET117Q6UWS5 81 aa3.68□□□□□ -1.82
NXF1-215ENST00000533440 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.68□□□□□ -1.82
NXF1-215ENST00000533440 A0A087WSZ3 146 aa3.67□□□□□ -1.82
NXF1-215ENST00000533440 SCGB1D4Q6XE38 83 aa3.67□□□□□ -1.82
NXF1-215ENST00000533440 TEN1Q86WV5 123 aa3.67□□□□□ -1.82
NXF1-215ENST00000533440 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
NXF1-215ENST00000533440 HIST1H2BKO60814 126 aa3.66□□□□□ -1.82
NXF1-215ENST00000533440 HIST1H2BJP06899 126 aa3.66□□□□□ -1.82
NXF1-215ENST00000533440 HIST1H2BOP23527 126 aa3.66□□□□□ -1.82
NXF1-215ENST00000533440 HIST1H2BBP33778 126 aa3.66□□□□□ -1.82
NXF1-215ENST00000533440 HIST1H2BDP58876 126 aa3.66□□□□□ -1.82
NXF1-215ENST00000533440 HIST1H2BCP62807 126 aa3.66□□□□□ -1.82
NXF1-215ENST00000533440 HIST2H2BEQ16778 126 aa3.66□□□□□ -1.82
NXF1-215ENST00000533440 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.66□□□□□ -1.82
NXF1-215ENST00000533440 HIST1H2BHQ93079 126 aa3.66□□□□□ -1.82
NXF1-215ENST00000533440 HIST1H2BNQ99877 126 aa3.66□□□□□ -1.82
NXF1-215ENST00000533440 HIST1H2BMQ99879 126 aa3.66□□□□□ -1.82
NXF1-215ENST00000533440 SNHG12Q9BXW3 62 aa3.66□□□□□ -1.82
NXF1-215ENST00000533440 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.83
NXF1-215ENST00000533440 SIGMAR1Q99720 223 aa3.65□□□□□ -1.83
NXF1-215ENST00000533440 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.83
NXF1-215ENST00000533440 A6NN06 94 aa3.64□□□□□ -1.83
NXF1-215ENST00000533440 C3orf79P0CE67 100 aa3.64□□□□□ -1.83
NXF1-215ENST00000533440 SPINK7P58062 85 aa3.62□□□□□ -1.83
NXF1-215ENST00000533440 KRTDAPP60985 99 aa3.62□□□□□ -1.83
NXF1-215ENST00000533440 COA6Q5JTJ3 125 aaKnown RBP3.62□□□□□ -1.83
NXF1-215ENST00000533440 IGKV4-1P06312 121 aa3.61□□□□□ -1.83
NXF1-215ENST00000533440 BVES-AS1Q5T3Y7 98 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms