RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 SNCGO76070 127 aa12.87□□□□□ -0.35
PKP3-210ENST00000533249 GAGE2AQ6NT46 116 aa12.87□□□□□ -0.35
PKP3-210ENST00000533249 H3BUT2 72 aa12.86□□□□□ -0.35
PKP3-210ENST00000533249 SLC25A20O43772 301 aa12.86□□□□□ -0.35
PKP3-210ENST00000533249 ELOF1P60002 83 aaKnown RBP12.86□□□□□ -0.35
PKP3-210ENST00000533249 ASB16-AS1Q495Z4 193 aa12.86□□□□□ -0.35
PKP3-210ENST00000533249 LINC00483Q53H64 154 aa12.86□□□□□ -0.35
PKP3-210ENST00000533249 Q6ZRX8 168 aa12.86□□□□□ -0.35
PKP3-210ENST00000533249 C9orf118A6NHY6 69 aa12.85□□□□□ -0.35
PKP3-210ENST00000533249 LYRM7Q5U5X0 104 aa12.85□□□□□ -0.35
PKP3-210ENST00000533249 IGLV9-49A0A0B4J1Y8 123 aa12.84□□□□□ -0.35
PKP3-210ENST00000533249 MOBPQ13875 183 aa12.84□□□□□ -0.35
PKP3-210ENST00000533249 DHRS4-AS1Q9P1J3 65 aa12.83□□□□□ -0.36
PKP3-210ENST00000533249 ERC2-IT1O76042 136 aa12.82□□□□□ -0.36
PKP3-210ENST00000533249 KRTAP4-1Q9BYQ7 146 aa12.8□□□□□ -0.36
PKP3-210ENST00000533249 LINC00575Q6W349 94 aa12.79□□□□□ -0.36
PKP3-210ENST00000533249 hADV29S1A0JD25 119 aa12.78□□□□□ -0.36
PKP3-210ENST00000533249 FABP2P12104 132 aa12.78□□□□□ -0.36
PKP3-210ENST00000533249 LINC01547P58512 204 aaPredicted RBP12.78□□□□□ -0.36
PKP3-210ENST00000533249 SEC61BP60468 96 aaKnown RBP12.78□□□□□ -0.36
PKP3-210ENST00000533249 CLEC2BQ92478 149 aa12.78□□□□□ -0.36
PKP3-210ENST00000533249 SSBP3-AS1Q7Z2R9 100 aa12.77□□□□□ -0.37
PKP3-210ENST00000533249 Q8N377 158 aa12.77□□□□□ -0.37
PKP3-210ENST00000533249 Q9BRP9 147 aa12.77□□□□□ -0.37
PKP3-210ENST00000533249 A0A1W2PPM0 123 aa12.76□□□□□ -0.37
PKP3-210ENST00000533249 RPS29P62273 56 aaKnown RBP12.75□□□□□ -0.37
PKP3-210ENST00000533249 DNAL4O96015 105 aa12.73□□□□□ -0.37
PKP3-210ENST00000533249 A0A1B0GX51 115 aa12.72□□□□□ -0.37
PKP3-210ENST00000533249 ATXN8Q156A1 80 aa12.72□□□□□ -0.37
PKP3-210ENST00000533249 FAM218AQ96MZ4 157 aa12.72□□□□□ -0.37
PKP3-210ENST00000533249 TRBV20-1A0A075B6N2 111 aa12.71□□□□□ -0.37
PKP3-210ENST00000533249 LST1O00453 97 aa12.69□□□□□ -0.38
PKP3-210ENST00000533249 TCL1BO95988 128 aa12.69□□□□□ -0.38
PKP3-210ENST00000533249 C9orf153Q5TBE3 101 aa12.69□□□□□ -0.38
PKP3-210ENST00000533249 DEFB105AQ8NG35 78 aa12.68□□□□□ -0.38
PKP3-210ENST00000533249 SPCS1Q9Y6A9 102 aa12.68□□□□□ -0.38
PKP3-210ENST00000533249 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.67□□□□□ -0.38
PKP3-210ENST00000533249 Q6ZQY7 126 aa12.67□□□□□ -0.38
PKP3-210ENST00000533249 GHRHP01286 108 aa12.66□□□□□ -0.38
PKP3-210ENST00000533249 TRACP01848 142 aa12.66□□□□□ -0.38
PKP3-210ENST00000533249 XP32Q5T750 250 aa12.65□□□□□ -0.38
PKP3-210ENST00000533249 ST20-AS1Q8NBB2 130 aa12.65□□□□□ -0.38
PKP3-210ENST00000533249 OCIAD2Q56VL3 154 aa12.63□□□□□ -0.39
PKP3-210ENST00000533249 ORMDL1Q9P0S3 153 aa12.62□□□□□ -0.39
PKP3-210ENST00000533249 GTF2H5Q6ZYL4 71 aa12.61□□□□□ -0.39
PKP3-210ENST00000533249 TEX49A0A1B0GTD5 131 aa12.6□□□□□ -0.39
PKP3-210ENST00000533249 H3BQ85 93 aa12.59□□□□□ -0.39
PKP3-210ENST00000533249 H3BMG7 143 aa12.58□□□□□ -0.4
PKP3-210ENST00000533249 K7EP34 96 aa12.58□□□□□ -0.4
PKP3-210ENST00000533249 LCE2DQ5TA82 110 aaPredicted RBP12.57□□□□□ -0.4
PKP3-210ENST00000533249 C9JAW5 83 aa12.56□□□□□ -0.4
PKP3-210ENST00000533249 IGLV5-48A0A075B6I7 105 aa12.55□□□□□ -0.4
PKP3-210ENST00000533249 BAALC-AS2P0C853 105 aa12.55□□□□□ -0.4
PKP3-210ENST00000533249 PPDPFLQ8WWR9 84 aa12.55□□□□□ -0.4
PKP3-210ENST00000533249 LAMTOR3Q9UHA4 124 aa12.54□□□□□ -0.4
PKP3-210ENST00000533249 TMEM256-PLSCR3K7ERE1 68 aa12.53□□□□□ -0.4
PKP3-210ENST00000533249 HRCT1Q6UXD1 115 aa12.53□□□□□ -0.4
PKP3-210ENST00000533249 A0A1B0GV90 55 aa12.51□□□□□ -0.41
PKP3-210ENST00000533249 F8WEM9 126 aa12.51□□□□□ -0.41
PKP3-210ENST00000533249 SPRR1BP22528 89 aa12.51□□□□□ -0.41
PKP3-210ENST00000533249 LCE2CQ5TA81 110 aa12.51□□□□□ -0.41
PKP3-210ENST00000533249 LIMD2Q9BT23 127 aa12.5□□□□□ -0.41
PKP3-210ENST00000533249 C9orf92A6NGG3 77 aa12.48□□□□□ -0.41
PKP3-210ENST00000533249 MTURNQ8N3F0 131 aa12.48□□□□□ -0.41
PKP3-210ENST00000533249 PCOTHQ58A44 107 aa12.47□□□□□ -0.41
PKP3-210ENST00000533249 H3BT86 120 aa12.45□□□□□ -0.42
PKP3-210ENST00000533249 NDUFV3P56181 108 aaKnown RBP12.45□□□□□ -0.42
PKP3-210ENST00000533249 UBE2V1Q13404 147 aa12.45□□□□□ -0.42
PKP3-210ENST00000533249 IGLV8-61A0A075B6I0 122 aa12.44□□□□□ -0.42
PKP3-210ENST00000533249 KRTAP19-2Q3LHN2 52 aa12.44□□□□□ -0.42
PKP3-210ENST00000533249 ANKRD29Q8N6D5 301 aa12.44□□□□□ -0.42
PKP3-210ENST00000533249 SMIM29Q86T20 159 aa12.43□□□□□ -0.42
PKP3-210ENST00000533249 CRCT1Q9UGL9 99 aa12.43□□□□□ -0.42
PKP3-210ENST00000533249 A0A1B0GV72 72 aa12.4□□□□□ -0.42
PKP3-210ENST00000533249 FSIP2Q5CZC0 6907 aa12.39□□□□□ -0.43
PKP3-210ENST00000533249 MT1HP80294 61 aa12.39□□□□□ -0.43
PKP3-210ENST00000533249 F8W1H4 67 aa12.38□□□□□ -0.43
PKP3-210ENST00000533249 PRO0461Q9UI25 63 aa12.35□□□□□ -0.43
PKP3-210ENST00000533249 JMJD7-PLA2G4BH0Y9G9 81 aa12.34□□□□□ -0.43
PKP3-210ENST00000533249 RBM3P98179 157 aaKnown RBP12.34□□□□□ -0.43
PKP3-210ENST00000533249 CD164Q04900 197 aa12.34□□□□□ -0.43
PKP3-210ENST00000533249 Q6JHZ5 121 aa12.33□□□□□ -0.44
PKP3-210ENST00000533249 SMCPP49901 116 aaPredicted RBP12.32□□□□□ -0.44
PKP3-210ENST00000533249 DSCR8Q96T75 97 aa12.32□□□□□ -0.44
PKP3-210ENST00000533249 A0A0G2JQZ4 141 aa12.26□□□□□ -0.45
PKP3-210ENST00000533249 C1orf195Q5TG92 126 aa12.26□□□□□ -0.45
PKP3-210ENST00000533249 IGFL1Q6UW32 110 aa12.26□□□□□ -0.45
PKP3-210ENST00000533249 Q5XG85 94 aa12.25□□□□□ -0.45
PKP3-210ENST00000533249 C14orf132Q9NPU4 83 aa12.24□□□□□ -0.45
PKP3-210ENST00000533249 ETDBQ3ZM63 59 aa12.23□□□□□ -0.45
PKP3-210ENST00000533249 TEN1Q86WV5 123 aa12.23□□□□□ -0.45
PKP3-210ENST00000533249 PDE6GP18545 87 aa12.22□□□□□ -0.45
PKP3-210ENST00000533249 OBSCN-AS1Q96MR7 158 aa12.22□□□□□ -0.45
PKP3-210ENST00000533249 VPS25Q9BRG1 176 aa12.22□□□□□ -0.45
PKP3-210ENST00000533249 KRTAP10-6P60371 365 aaPredicted RBP12.21□□□□□ -0.45
PKP3-210ENST00000533249 LORP23490 312 aaPredicted RBP12.2□□□□□ -0.46
PKP3-210ENST00000533249 RPL37P61927 97 aaKnown RBP12.2□□□□□ -0.46
PKP3-210ENST00000533249 TRBV7-4A0A0J9YYF1 115 aa12.19□□□□□ -0.46
PKP3-210ENST00000533249 CCKP06307 115 aa12.19□□□□□ -0.46
PKP3-210ENST00000533249 LOC110117498A0A087WWA1 95 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms