RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 hADV29S1A0JD25 119 aa9.95□□□□□ -0.82
SMG1-203ENST00000532700 Q1RN00 199 aa9.95□□□□□ -0.82
SMG1-203ENST00000532700 KRTAP4-1Q9BYQ7 146 aa9.95□□□□□ -0.82
SMG1-203ENST00000532700 IGLV5-48A0A075B6I7 105 aa9.94□□□□□ -0.82
SMG1-203ENST00000532700 SNCGO76070 127 aa9.93□□□□□ -0.82
SMG1-203ENST00000532700 H0YGX0 51 aa9.92□□□□□ -0.82
SMG1-203ENST00000532700 LINC01547P58512 204 aaPredicted RBP9.91□□□□□ -0.82
SMG1-203ENST00000532700 RPS29P62273 56 aaKnown RBP9.91□□□□□ -0.82
SMG1-203ENST00000532700 PRO1933Q9H354 126 aa9.91□□□□□ -0.82
SMG1-203ENST00000532700 A0A0U1RQV1 116 aa9.88□□□□□ -0.83
SMG1-203ENST00000532700 LOC105371267A0A1B0GV96 52 aa9.88□□□□□ -0.83
SMG1-203ENST00000532700 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.88□□□□□ -0.83
SMG1-203ENST00000532700 Q6ZQY7 126 aa9.88□□□□□ -0.83
SMG1-203ENST00000532700 SMIM29Q86T20 159 aa9.87□□□□□ -0.83
SMG1-203ENST00000532700 ASB16-AS1Q495Z4 193 aa9.86□□□□□ -0.83
SMG1-203ENST00000532700 HRCT1Q6UXD1 115 aa9.86□□□□□ -0.83
SMG1-203ENST00000532700 KRTAP3-3Q9BYR6 98 aa9.86□□□□□ -0.83
SMG1-203ENST00000532700 KRTAP3-2Q9BYR7 98 aa9.86□□□□□ -0.83
SMG1-203ENST00000532700 K7ERJ3 54 aa9.85□□□□□ -0.83
SMG1-203ENST00000532700 F8WEM9 126 aa9.84□□□□□ -0.83
SMG1-203ENST00000532700 PPDPFLQ8WWR9 84 aa9.84□□□□□ -0.83
SMG1-203ENST00000532700 A0A0G2JQZ4 141 aa9.83□□□□□ -0.84
SMG1-203ENST00000532700 A0A1B0GX51 115 aa9.83□□□□□ -0.84
SMG1-203ENST00000532700 TSTD3H0UI37 97 aa9.83□□□□□ -0.84
SMG1-203ENST00000532700 PSMB2P49721 201 aa9.83□□□□□ -0.84
SMG1-203ENST00000532700 OCIAD2Q56VL3 154 aa9.83□□□□□ -0.84
SMG1-203ENST00000532700 M0R143 59 aa9.82□□□□□ -0.84
SMG1-203ENST00000532700 TRIAP1O43715 76 aa9.82□□□□□ -0.84
SMG1-203ENST00000532700 COX6CP09669 75 aa9.82□□□□□ -0.84
SMG1-203ENST00000532700 XP32Q5T750 250 aa9.82□□□□□ -0.84
SMG1-203ENST00000532700 GHRHP01286 108 aa9.8□□□□□ -0.84
SMG1-203ENST00000532700 FAM218AQ96MZ4 157 aa9.8□□□□□ -0.84
SMG1-203ENST00000532700 SNHG12Q9BXW3 62 aa9.8□□□□□ -0.84
SMG1-203ENST00000532700 CD164Q04900 197 aa9.79□□□□□ -0.84
SMG1-203ENST00000532700 KRTAP9-2Q9BYQ4 174 aa9.79□□□□□ -0.84
SMG1-203ENST00000532700 LIMD2Q9BT23 127 aa9.77□□□□□ -0.85
SMG1-203ENST00000532700 Q6JHZ5 121 aa9.75□□□□□ -0.85
SMG1-203ENST00000532700 CLEC2BQ92478 149 aa9.75□□□□□ -0.85
SMG1-203ENST00000532700 DNAL4O96015 105 aa9.74□□□□□ -0.85
SMG1-203ENST00000532700 SCGB1C2P0DMR2 95 aa9.74□□□□□ -0.85
SMG1-203ENST00000532700 IGLV8-61A0A075B6I0 122 aa9.73□□□□□ -0.85
SMG1-203ENST00000532700 C9orf92A6NGG3 77 aa9.73□□□□□ -0.85
SMG1-203ENST00000532700 SEC61BP60468 96 aaKnown RBP9.73□□□□□ -0.85
SMG1-203ENST00000532700 H3BQ85 93 aa9.72□□□□□ -0.85
SMG1-203ENST00000532700 FABP2P12104 132 aa9.69□□□□□ -0.86
SMG1-203ENST00000532700 NDUFV3P56181 108 aaKnown RBP9.69□□□□□ -0.86
SMG1-203ENST00000532700 ORMDL1Q9P0S3 153 aa9.69□□□□□ -0.86
SMG1-203ENST00000532700 LCE2CQ5TA81 110 aa9.68□□□□□ -0.86
SMG1-203ENST00000532700 Q5XG85 94 aa9.68□□□□□ -0.86
SMG1-203ENST00000532700 KRTAP19-2Q3LHN2 52 aa9.67□□□□□ -0.86
SMG1-203ENST00000532700 IGFL1Q6UW32 110 aa9.67□□□□□ -0.86
SMG1-203ENST00000532700 TRACP01848 142 aa9.66□□□□□ -0.86
SMG1-203ENST00000532700 C1orf195Q5TG92 126 aa9.66□□□□□ -0.86
SMG1-203ENST00000532700 H3BUT2 72 aa9.65□□□□□ -0.86
SMG1-203ENST00000532700 TMEM256-PLSCR3K7ERE1 68 aa9.65□□□□□ -0.86
SMG1-203ENST00000532700 LST1O00453 97 aa9.65□□□□□ -0.86
SMG1-203ENST00000532700 TCL1BO95988 128 aa9.65□□□□□ -0.86
SMG1-203ENST00000532700 BATFQ16520 125 aa9.65□□□□□ -0.86
SMG1-203ENST00000532700 PCOTHQ58A44 107 aa9.65□□□□□ -0.86
SMG1-203ENST00000532700 H3BMG7 143 aa9.63□□□□□ -0.87
SMG1-203ENST00000532700 TRBV7-7A0A0K0K1E9 115 aa9.61□□□□□ -0.87
SMG1-203ENST00000532700 ATXN8Q156A1 80 aa9.59□□□□□ -0.87
SMG1-203ENST00000532700 LYRM7Q5U5X0 104 aa9.59□□□□□ -0.87
SMG1-203ENST00000532700 NAA38Q9BRA0 125 aaKnown RBP9.59□□□□□ -0.87
SMG1-203ENST00000532700 UBE2V1Q13404 147 aa9.58□□□□□ -0.88
SMG1-203ENST00000532700 Q6Q795 121 aa9.58□□□□□ -0.88
SMG1-203ENST00000532700 TEN1Q86WV5 123 aa9.57□□□□□ -0.88
SMG1-203ENST00000532700 ANKRD29Q8N6D5 301 aa9.55□□□□□ -0.88
SMG1-203ENST00000532700 BAALC-AS2P0C853 105 aa9.54□□□□□ -0.88
SMG1-203ENST00000532700 TRBV20-1A0A075B6N2 111 aa9.53□□□□□ -0.88
SMG1-203ENST00000532700 SS18L2Q9UHA2 77 aa9.53□□□□□ -0.88
SMG1-203ENST00000532700 C9orf118A6NHY6 69 aa9.52□□□□□ -0.89
SMG1-203ENST00000532700 A0A1B0GV72 72 aa9.51□□□□□ -0.89
SMG1-203ENST00000532700 MT1HP80294 61 aa9.51□□□□□ -0.89
SMG1-203ENST00000532700 TAX1BP3O14907 124 aa9.49□□□□□ -0.89
SMG1-203ENST00000532700 RPL37P61927 97 aaKnown RBP9.49□□□□□ -0.89
SMG1-203ENST00000532700 RBM3P98179 157 aaKnown RBP9.49□□□□□ -0.89
SMG1-203ENST00000532700 A0A087WSZ3 146 aa9.47□□□□□ -0.89
SMG1-203ENST00000532700 TRBV7-4A0A0J9YYF1 115 aa9.47□□□□□ -0.89
SMG1-203ENST00000532700 A0A1W2PNM2 257 aa9.47□□□□□ -0.89
SMG1-203ENST00000532700 DSCR8Q96T75 97 aa9.47□□□□□ -0.89
SMG1-203ENST00000532700 A0A1W2PPM0 123 aa9.46□□□□□ -0.9
SMG1-203ENST00000532700 KRTAP9-6A0A140TA67 174 aa9.45□□□□□ -0.9
SMG1-203ENST00000532700 CCKP06307 115 aa9.45□□□□□ -0.9
SMG1-203ENST00000532700 JMJD7-PLA2G4BH0Y9G9 81 aa9.43□□□□□ -0.9
SMG1-203ENST00000532700 COL5A1-AS1Q5SY13 56 aa9.43□□□□□ -0.9
SMG1-203ENST00000532700 C9JAW5 83 aa9.42□□□□□ -0.9
SMG1-203ENST00000532700 VPS25Q9BRG1 176 aa9.4□□□□□ -0.9
SMG1-203ENST00000532700 C21orf62-AS1Q17RA5 79 aa9.38□□□□□ -0.91
SMG1-203ENST00000532700 PCP4L1A6NKN8 68 aa9.37□□□□□ -0.91
SMG1-203ENST00000532700 PDE6GP18545 87 aa9.37□□□□□ -0.91
SMG1-203ENST00000532700 OBSCN-AS1Q96MR7 158 aa9.37□□□□□ -0.91
SMG1-203ENST00000532700 SPCS1Q9Y6A9 102 aa9.36□□□□□ -0.91
SMG1-203ENST00000532700 H3BT86 120 aa9.35□□□□□ -0.91
SMG1-203ENST00000532700 Q96NJ1 140 aa9.35□□□□□ -0.91
SMG1-203ENST00000532700 LOC110117498A0A087WWA1 95 aa9.34□□□□□ -0.91
SMG1-203ENST00000532700 FLGP20930 4061 aaPredicted RBP9.34□□□□□ -0.91
SMG1-203ENST00000532700 LORP23490 312 aaPredicted RBP9.33□□□□□ -0.92
SMG1-203ENST00000532700 Q6ZQT0 140 aa9.32□□□□□ -0.92
SMG1-203ENST00000532700 A0A1B0GW54 56 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms