RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 LYRM7Q5U5X0 104 aa7.5□□□□□ -1.21
COPB1-208ENST00000532088 SPRR4Q96PI1 79 aa7.5□□□□□ -1.21
COPB1-208ENST00000532088 TAX1BP3O14907 124 aa7.49□□□□□ -1.21
COPB1-208ENST00000532088 FAM229BQ4G0N7 80 aa7.49□□□□□ -1.21
COPB1-208ENST00000532088 LINC00483Q53H64 154 aa7.49□□□□□ -1.21
COPB1-208ENST00000532088 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.49□□□□□ -1.21
COPB1-208ENST00000532088 SPRR1BP22528 89 aa7.48□□□□□ -1.21
COPB1-208ENST00000532088 SRRM2Q9UQ35 2752 aaKnown RBP7.48□□□□□ -1.21
COPB1-208ENST00000532088 IGLV5-48A0A075B6I7 105 aa7.47□□□□□ -1.21
COPB1-208ENST00000532088 OXTP01178 125 aa7.47□□□□□ -1.21
COPB1-208ENST00000532088 SCGB1C2P0DMR2 95 aa7.47□□□□□ -1.21
COPB1-208ENST00000532088 OCIAD2Q56VL3 154 aa7.47□□□□□ -1.21
COPB1-208ENST00000532088 PPDPFLQ8WWR9 84 aa7.47□□□□□ -1.21
COPB1-208ENST00000532088 FAM218AQ96MZ4 157 aa7.47□□□□□ -1.21
COPB1-208ENST00000532088 ABCA13Q86UQ4 5058 aa7.47□□□□□ -1.21
COPB1-208ENST00000532088 FAT3Q8TDW7 4589 aa7.47□□□□□ -1.21
COPB1-208ENST00000532088 LINC01600Q96MT4 127 aa7.46□□□□□ -1.22
COPB1-208ENST00000532088 TEX49A0A1B0GTD5 131 aa7.45□□□□□ -1.22
COPB1-208ENST00000532088 H3BQ85 93 aa7.45□□□□□ -1.22
COPB1-208ENST00000532088 H3BUT2 72 aa7.45□□□□□ -1.22
COPB1-208ENST00000532088 LST1O00453 97 aa7.45□□□□□ -1.22
COPB1-208ENST00000532088 TRACP01848 142 aa7.45□□□□□ -1.22
COPB1-208ENST00000532088 Q6ZQY7 126 aa7.45□□□□□ -1.22
COPB1-208ENST00000532088 ST20-AS1Q8NBB2 130 aa7.45□□□□□ -1.22
COPB1-208ENST00000532088 CLEC2BQ92478 149 aa7.45□□□□□ -1.22
COPB1-208ENST00000532088 TRBV20-1A0A075B6N2 111 aa7.44□□□□□ -1.22
COPB1-208ENST00000532088 KRTAP29-1A8MX34 341 aaPredicted RBP7.44□□□□□ -1.22
COPB1-208ENST00000532088 CRYGAP11844 174 aa7.44□□□□□ -1.22
COPB1-208ENST00000532088 LINC01547P58512 204 aaPredicted RBP7.44□□□□□ -1.22
COPB1-208ENST00000532088 GAGE2AQ6NT46 116 aa7.44□□□□□ -1.22
COPB1-208ENST00000532088 A0A1W2PPM0 123 aa7.43□□□□□ -1.22
COPB1-208ENST00000532088 DNAL4O96015 105 aa7.42□□□□□ -1.22
COPB1-208ENST00000532088 FABP2P12104 132 aa7.42□□□□□ -1.22
COPB1-208ENST00000532088 ATXN8Q156A1 80 aa7.42□□□□□ -1.22
COPB1-208ENST00000532088 NAA38Q9BRA0 125 aaKnown RBP7.42□□□□□ -1.22
COPB1-208ENST00000532088 Q8N377 158 aa7.41□□□□□ -1.22
COPB1-208ENST00000532088 LRP1Q07954 4544 aaKnown RBP7.4□□□□□ -1.22
COPB1-208ENST00000532088 TCL1BO95988 128 aa7.4□□□□□ -1.22
COPB1-208ENST00000532088 LAMTOR3Q9UHA4 124 aa7.4□□□□□ -1.22
COPB1-208ENST00000532088 A0A087X002 238 aa7.39□□□□□ -1.23
COPB1-208ENST00000532088 KRTAP10-8P60410 259 aa7.39□□□□□ -1.23
COPB1-208ENST00000532088 DEFB105AQ8NG35 78 aa7.39□□□□□ -1.23
COPB1-208ENST00000532088 ANAPC11Q9NYG5 84 aa7.39□□□□□ -1.23
COPB1-208ENST00000532088 ORMDL1Q9P0S3 153 aa7.39□□□□□ -1.23
COPB1-208ENST00000532088 MYCBP2O75592 4640 aa7.38□□□□□ -1.23
COPB1-208ENST00000532088 SMIM29Q86T20 159 aa7.38□□□□□ -1.23
COPB1-208ENST00000532088 PRR26Q8N8Z3 221 aa7.38□□□□□ -1.23
COPB1-208ENST00000532088 TNXBP22105 4242 aa7.37□□□□□ -1.23
COPB1-208ENST00000532088 TMEM256-PLSCR3K7ERE1 68 aa7.37□□□□□ -1.23
COPB1-208ENST00000532088 KRTAP13-2Q52LG2 175 aa7.37□□□□□ -1.23
COPB1-208ENST00000532088 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
COPB1-208ENST00000532088 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
COPB1-208ENST00000532088 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
COPB1-208ENST00000532088 PCLOQ9Y6V0 5065 aa7.36□□□□□ -1.23
COPB1-208ENST00000532088 UBE2V1Q13404 147 aa7.35□□□□□ -1.23
COPB1-208ENST00000532088 Q8NBF4 154 aa7.35□□□□□ -1.23
COPB1-208ENST00000532088 TYMSOSQ8TAI1 123 aa7.35□□□□□ -1.23
COPB1-208ENST00000532088 SPCS1Q9Y6A9 102 aa7.35□□□□□ -1.23
COPB1-208ENST00000532088 IGLV8-61A0A075B6I0 122 aa7.34□□□□□ -1.23
COPB1-208ENST00000532088 F8WEM9 126 aa7.34□□□□□ -1.23
COPB1-208ENST00000532088 C3orf22Q8N5N4 141 aa7.34□□□□□ -1.23
COPB1-208ENST00000532088 IGLV9-49A0A0B4J1Y8 123 aa7.32□□□□□ -1.24
COPB1-208ENST00000532088 MOBPQ13875 183 aa7.32□□□□□ -1.24
COPB1-208ENST00000532088 C9orf153Q5TBE3 101 aa7.32□□□□□ -1.24
COPB1-208ENST00000532088 K7EP34 96 aa7.31□□□□□ -1.24
COPB1-208ENST00000532088 BAALC-AS2P0C853 105 aa7.31□□□□□ -1.24
COPB1-208ENST00000532088 NDUFV3P56181 108 aaKnown RBP7.31□□□□□ -1.24
COPB1-208ENST00000532088 Q6JHZ5 121 aa7.31□□□□□ -1.24
COPB1-208ENST00000532088 H3BMG7 143 aa7.3□□□□□ -1.24
COPB1-208ENST00000532088 H3BT86 120 aa7.3□□□□□ -1.24
COPB1-208ENST00000532088 SPAG11AQ6PDA7 123 aa7.3□□□□□ -1.24
COPB1-208ENST00000532088 GTF2H5Q6ZYL4 71 aa7.3□□□□□ -1.24
COPB1-208ENST00000532088 C9JAW5 83 aa7.29□□□□□ -1.24
COPB1-208ENST00000532088 PCP4P48539 62 aa7.29□□□□□ -1.24
COPB1-208ENST00000532088 LINC00304Q8N9R0 145 aa7.28□□□□□ -1.24
COPB1-208ENST00000532088 CD164Q04900 197 aa7.27□□□□□ -1.25
COPB1-208ENST00000532088 ANKRD29Q8N6D5 301 aa7.27□□□□□ -1.25
COPB1-208ENST00000532088 JMJD7-PLA2G4BH0Y9G9 81 aa7.26□□□□□ -1.25
COPB1-208ENST00000532088 SPINK1P00995 79 aa7.26□□□□□ -1.25
COPB1-208ENST00000532088 RPS29P62273 56 aaKnown RBP7.26□□□□□ -1.25
COPB1-208ENST00000532088 A0A1B0GV90 55 aa7.24□□□□□ -1.25
COPB1-208ENST00000532088 IGFL1Q6UW32 110 aa7.24□□□□□ -1.25
COPB1-208ENST00000532088 RBM3P98179 157 aaKnown RBP7.23□□□□□ -1.25
COPB1-208ENST00000532088 Q6Q795 121 aa7.23□□□□□ -1.25
COPB1-208ENST00000532088 PRO0461Q9UI25 63 aa7.23□□□□□ -1.25
COPB1-208ENST00000532088 OBSCN-AS1Q96MR7 158 aa7.22□□□□□ -1.25
COPB1-208ENST00000532088 TRBV7-4A0A0J9YYF1 115 aa7.21□□□□□ -1.26
COPB1-208ENST00000532088 F8W1H4 67 aa7.21□□□□□ -1.26
COPB1-208ENST00000532088 Q5XG85 94 aa7.21□□□□□ -1.26
COPB1-208ENST00000532088 PDE6GP18545 87 aa7.2□□□□□ -1.26
COPB1-208ENST00000532088 DSCR8Q96T75 97 aa7.2□□□□□ -1.26
COPB1-208ENST00000532088 TEN1Q86WV5 123 aa7.19□□□□□ -1.26
COPB1-208ENST00000532088 MTURNQ8N3F0 131 aa7.19□□□□□ -1.26
COPB1-208ENST00000532088 LIMD2Q9BT23 127 aa7.19□□□□□ -1.26
COPB1-208ENST00000532088 LOC110117498A0A087WWA1 95 aa7.18□□□□□ -1.26
COPB1-208ENST00000532088 TRBV7-7A0A0K0K1E9 115 aa7.17□□□□□ -1.26
COPB1-208ENST00000532088 KRTAP5-3Q6L8H2 238 aa7.17□□□□□ -1.26
COPB1-208ENST00000532088 DMBT1Q9UGM3 2413 aaPredicted RBP7.16□□□□□ -1.26
COPB1-208ENST00000532088 A0A0G2JQZ4 141 aa7.16□□□□□ -1.26
COPB1-208ENST00000532088 A0A1B0GW54 56 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms