RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
NEDD8-206ENST00000531430 LST1O00453 97 aa4.68□□□□□ -1.66
NEDD8-206ENST00000531430 VAMP3Q15836 100 aa4.68□□□□□ -1.66
NEDD8-206ENST00000531430 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
NEDD8-206ENST00000531430 SYS1-DBNDD2H3BUS1 97 aa4.67□□□□□ -1.66
NEDD8-206ENST00000531430 OCIAD2Q56VL3 154 aa4.67□□□□□ -1.66
NEDD8-206ENST00000531430 Q6JHZ5 121 aa4.67□□□□□ -1.66
NEDD8-206ENST00000531430 IGFL1Q6UW32 110 aa4.67□□□□□ -1.66
NEDD8-206ENST00000531430 MUSTN1Q8IVN3 82 aa4.67□□□□□ -1.66
NEDD8-206ENST00000531430 SMIM11BQ8TCY0 68 aa4.67□□□□□ -1.66
NEDD8-206ENST00000531430 COPS9Q8WXC6 57 aa4.67□□□□□ -1.66
NEDD8-206ENST00000531430 CLEC2BQ92478 149 aa4.66□□□□□ -1.66
NEDD8-206ENST00000531430 LINC00846Q9NV44 126 aa4.66□□□□□ -1.66
NEDD8-206ENST00000531430 TRAV13-2A0A0B4J235 113 aa4.65□□□□□ -1.67
NEDD8-206ENST00000531430 MT1FP04733 61 aa4.65□□□□□ -1.67
NEDD8-206ENST00000531430 Q6ZQY7 126 aa4.65□□□□□ -1.67
NEDD8-206ENST00000531430 hADV29S1A0JD25 119 aa4.64□□□□□ -1.67
NEDD8-206ENST00000531430 IFITM1P13164 125 aa4.64□□□□□ -1.67
NEDD8-206ENST00000531430 SNHG12Q9BXW3 62 aa4.64□□□□□ -1.67
NEDD8-206ENST00000531430 LINC00575Q6W349 94 aa4.63□□□□□ -1.67
NEDD8-206ENST00000531430 C20orf166-AS1Q96NR2 134 aa4.63□□□□□ -1.67
NEDD8-206ENST00000531430 KRTAP9-3Q9BYQ3 159 aa4.63□□□□□ -1.67
NEDD8-206ENST00000531430 A8MUU9 505 aa4.62□□□□□ -1.67
NEDD8-206ENST00000531430 H3BUT2 72 aa4.62□□□□□ -1.67
NEDD8-206ENST00000531430 DSCR10P59022 87 aa4.62□□□□□ -1.67
NEDD8-206ENST00000531430 LINC01545Q5VT33 79 aa4.62□□□□□ -1.67
NEDD8-206ENST00000531430 PET117Q6UWS5 81 aa4.62□□□□□ -1.67
NEDD8-206ENST00000531430 RBM12B-AS1Q9P1G2 102 aa4.62□□□□□ -1.67
NEDD8-206ENST00000531430 KRTDAPP60985 99 aa4.6□□□□□ -1.67
NEDD8-206ENST00000531430 Q6ZVH6 145 aa4.6□□□□□ -1.67
NEDD8-206ENST00000531430 SS18L2Q9UHA2 77 aa4.59□□□□□ -1.67
NEDD8-206ENST00000531430 C3orf79P0CE67 100 aa4.58□□□□□ -1.68
NEDD8-206ENST00000531430 ANKRD39Q53RE8 183 aa4.58□□□□□ -1.68
NEDD8-206ENST00000531430 ATOH7Q8N100 152 aa4.58□□□□□ -1.68
NEDD8-206ENST00000531430 COLCA2A8K830 154 aa4.57□□□□□ -1.68
NEDD8-206ENST00000531430 KRTAP16-1A8MUX0 517 aa4.57□□□□□ -1.68
NEDD8-206ENST00000531430 A0A087WSZ3 146 aa4.56□□□□□ -1.68
NEDD8-206ENST00000531430 SCGB1D1O95968 90 aa4.56□□□□□ -1.68
NEDD8-206ENST00000531430 LINC00313P59037 77 aa4.56□□□□□ -1.68
NEDD8-206ENST00000531430 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.56□□□□□ -1.68
NEDD8-206ENST00000531430 SIGMAR1Q99720 223 aa4.56□□□□□ -1.68
NEDD8-206ENST00000531430 TEN1Q86WV5 123 aa4.54□□□□□ -1.68
NEDD8-206ENST00000531430 C12orf57Q99622 126 aa4.54□□□□□ -1.68
NEDD8-206ENST00000531430 HIST1H2BKO60814 126 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 HIST1H2BJP06899 126 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 HRES1P13985 223 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 HIST1H2BOP23527 126 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 HIST1H2BBP33778 126 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 HIST1H2BDP58876 126 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 HIST1H2BCP62807 126 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 HIST2H2BEQ16778 126 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 KRTAP19-6Q3LI70 58 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.53□□□□□ -1.68
NEDD8-206ENST00000531430 MTURNQ8N3F0 131 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 HIST1H2BHQ93079 126 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 HIST1H2BNQ99877 126 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 HIST1H2BMQ99879 126 aa4.53□□□□□ -1.68
NEDD8-206ENST00000531430 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
NEDD8-206ENST00000531430 PPDPFLQ8WWR9 84 aa4.52□□□□□ -1.69
NEDD8-206ENST00000531430 SNCGO76070 127 aa4.51□□□□□ -1.69
NEDD8-206ENST00000531430 IGKV4-1P06312 121 aa4.51□□□□□ -1.69
NEDD8-206ENST00000531430 NDUFV3P56181 108 aaKnown RBP4.51□□□□□ -1.69
NEDD8-206ENST00000531430 BVES-AS1Q5T3Y7 98 aa4.51□□□□□ -1.69
NEDD8-206ENST00000531430 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
NEDD8-206ENST00000531430 DEFB116Q30KQ4 102 aa4.5□□□□□ -1.69
NEDD8-206ENST00000531430 MPLKIPQ8TAP9 179 aa4.5□□□□□ -1.69
NEDD8-206ENST00000531430 H3BMG7 143 aa4.49□□□□□ -1.69
NEDD8-206ENST00000531430 FABP2P12104 132 aa4.49□□□□□ -1.69
NEDD8-206ENST00000531430 Q8N9P0 234 aaPredicted RBP4.48□□□□□ -1.69
NEDD8-206ENST00000531430 IGHV6-1A0A0B4J1U7 121 aa4.47□□□□□ -1.69
NEDD8-206ENST00000531430 LOC105371267A0A1B0GV96 52 aa4.47□□□□□ -1.69
NEDD8-206ENST00000531430 A0A1B0GV72 72 aa4.46□□□□□ -1.7
NEDD8-206ENST00000531430 HSBP1L1C9JCN9 74 aa4.45□□□□□ -1.7
NEDD8-206ENST00000531430 SNRPEP62304 92 aaKnown RBP4.45□□□□□ -1.7
NEDD8-206ENST00000531430 HIST1H4GQ99525 98 aa4.45□□□□□ -1.7
NEDD8-206ENST00000531430 TMA7Q9Y2S6 64 aaKnown RBP4.45□□□□□ -1.7
NEDD8-206ENST00000531430 A0A1W2PNM2 257 aa4.44□□□□□ -1.7
NEDD8-206ENST00000531430 A8MWP4 228 aa4.44□□□□□ -1.7
NEDD8-206ENST00000531430 SPINK7P58062 85 aa4.44□□□□□ -1.7
NEDD8-206ENST00000531430 H0YGX0 51 aa4.43□□□□□ -1.7
NEDD8-206ENST00000531430 ANKRD29Q8N6D5 301 aa4.43□□□□□ -1.7
NEDD8-206ENST00000531430 RAB37Q96AX2 223 aa4.43□□□□□ -1.7
NEDD8-206ENST00000531430 FAM218AQ96MZ4 157 aa4.42□□□□□ -1.7
NEDD8-206ENST00000531430 NEBP20929 6669 aa4.41□□□□□ -1.7
NEDD8-206ENST00000531430 GHRHP01286 108 aa4.41□□□□□ -1.7
NEDD8-206ENST00000531430 LYRM7Q5U5X0 104 aa4.41□□□□□ -1.7
NEDD8-206ENST00000531430 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
NEDD8-206ENST00000531430 COA6Q5JTJ3 125 aaKnown RBP4.4□□□□□ -1.71
NEDD8-206ENST00000531430 ZCCHC13Q8WW36 166 aaKnown RBP4.4□□□□□ -1.71
NEDD8-206ENST00000531430 WFDC13Q8IUB5 93 aa4.39□□□□□ -1.71
NEDD8-206ENST00000531430 TRBV7-4A0A0J9YYF1 115 aa4.38□□□□□ -1.71
NEDD8-206ENST00000531430 VPS25Q9BRG1 176 aa4.38□□□□□ -1.71
NEDD8-206ENST00000531430 LINC00472Q9H8W2 130 aa4.38□□□□□ -1.71
NEDD8-206ENST00000531430 C8orf87E5RJ46 101 aa4.37□□□□□ -1.71
NEDD8-206ENST00000531430 TRACP01848 142 aa4.37□□□□□ -1.71
NEDD8-206ENST00000531430 S100A2P29034 98 aa4.37□□□□□ -1.71
NEDD8-206ENST00000531430 A0A1B0GVX0 72 aa4.36□□□□□ -1.71
NEDD8-206ENST00000531430 CCKP06307 115 aa4.36□□□□□ -1.71
NEDD8-206ENST00000531430 SMIM6P0DI80 62 aa4.36□□□□□ -1.71
NEDD8-206ENST00000531430 A0A1B0GX51 115 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms