RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 TLN2Q9Y4G6 2542 aa4.9□□□□□ -1.62
PTPRK-219ENST00000531050 Q6ZR54 194 aa4.9□□□□□ -1.63
PTPRK-219ENST00000531050 PRR34Q9NV39 138 aa4.9□□□□□ -1.63
PTPRK-219ENST00000531050 KRTAP4-16G5E9R7 235 aaPredicted RBP4.89□□□□□ -1.63
PTPRK-219ENST00000531050 NIPBLQ6KC79 2804 aaeCLIP4.89□□□□□ -1.63
PTPRK-219ENST00000531050 CSAG1Q6PB30 78 aa4.89□□□□□ -1.63
PTPRK-219ENST00000531050 CAMK2N2Q96S95 79 aa4.89□□□□□ -1.63
PTPRK-219ENST00000531050 MYO9AB2RTY4 2548 aa4.88□□□□□ -1.63
PTPRK-219ENST00000531050 ITPR3Q14573 2671 aa4.88□□□□□ -1.63
PTPRK-219ENST00000531050 BAHCC1Q9P281 2608 aa4.88□□□□□ -1.63
PTPRK-219ENST00000531050 H0Y9J4 135 aa4.88□□□□□ -1.63
PTPRK-219ENST00000531050 A0A087WSZ3 146 aa4.87□□□□□ -1.63
PTPRK-219ENST00000531050 KRTAP1-1Q07627 177 aa4.87□□□□□ -1.63
PTPRK-219ENST00000531050 IGFL1Q6UW32 110 aa4.87□□□□□ -1.63
PTPRK-219ENST00000531050 C19orf73Q9NVV2 129 aa4.87□□□□□ -1.63
PTPRK-219ENST00000531050 ZNF706Q9Y5V0 76 aaPredicted RBP4.87□□□□□ -1.63
PTPRK-219ENST00000531050 ZNF469Q96JG9 3925 aaPredicted RBP4.87□□□□□ -1.63
PTPRK-219ENST00000531050 NBEAL2Q6ZNJ1 2754 aa4.86□□□□□ -1.63
PTPRK-219ENST00000531050 FN1P02751 2386 aaKnown RBP4.85□□□□□ -1.63
PTPRK-219ENST00000531050 FLNBO75369 2602 aaKnown RBP4.85□□□□□ -1.63
PTPRK-219ENST00000531050 SPRR1AP35321 89 aa4.85□□□□□ -1.63
PTPRK-219ENST00000531050 UNC79Q9P2D8 2635 aa4.85□□□□□ -1.63
PTPRK-219ENST00000531050 SONP18583 2426 aaKnown RBP4.85□□□□□ -1.63
PTPRK-219ENST00000531050 RPL37AP8A6NKH3 93 aa4.84□□□□□ -1.63
PTPRK-219ENST00000531050 A8MWP4 228 aa4.84□□□□□ -1.63
PTPRK-219ENST00000531050 CMC4P56277 68 aaPredicted RBP4.84□□□□□ -1.63
PTPRK-219ENST00000531050 SPATA8Q6RVD6 105 aa4.84□□□□□ -1.63
PTPRK-219ENST00000531050 FLNAP21333 2647 aaKnown RBP4.84□□□□□ -1.63
PTPRK-219ENST00000531050 MMP24-AS1A0A0U1RRL7 71 aa4.83□□□□□ -1.64
PTPRK-219ENST00000531050 C1orf134Q5TEV5 83 aa4.83□□□□□ -1.64
PTPRK-219ENST00000531050 C15orf56Q8N910 161 aa4.83□□□□□ -1.64
PTPRK-219ENST00000531050 ITPR2Q14571 2701 aa4.83□□□□□ -1.64
PTPRK-219ENST00000531050 LELP1Q5T871 98 aa4.83□□□□□ -1.64
PTPRK-219ENST00000531050 KRTAP26-1Q6PEX3 210 aa4.83□□□□□ -1.64
PTPRK-219ENST00000531050 IGKV2-24A0A0C4DH68 120 aa4.82□□□□□ -1.64
PTPRK-219ENST00000531050 ALMS1Q8TCU4 4167 aa4.82□□□□□ -1.64
PTPRK-219ENST00000531050 DEFB131BA0A096LNP1 70 aa4.81□□□□□ -1.64
PTPRK-219ENST00000531050 LINC00472Q9H8W2 130 aa4.81□□□□□ -1.64
PTPRK-219ENST00000531050 X6R8D5 127 aa4.81□□□□□ -1.64
PTPRK-219ENST00000531050 PDZD2O15018 2839 aa4.81□□□□□ -1.64
PTPRK-219ENST00000531050 IGLV8-61A0A075B6I0 122 aa4.8□□□□□ -1.64
PTPRK-219ENST00000531050 ANK3Q12955 4377 aaKnown RBP4.8□□□□□ -1.64
PTPRK-219ENST00000531050 NOTCH2Q04721 2471 aa4.8□□□□□ -1.64
PTPRK-219ENST00000531050 CCDC168Q8NDH2 2452 aa4.79□□□□□ -1.64
PTPRK-219ENST00000531050 FAM168BA1KXE4 195 aa4.79□□□□□ -1.64
PTPRK-219ENST00000531050 KRTAP10-3P60369 221 aa4.78□□□□□ -1.64
PTPRK-219ENST00000531050 ROMO1P60602 79 aa4.78□□□□□ -1.64
PTPRK-219ENST00000531050 KRTAP7-1Q8IUC3 87 aa4.78□□□□□ -1.64
PTPRK-219ENST00000531050 TP53AIP1Q9HCN2 124 aa4.78□□□□□ -1.64
PTPRK-219ENST00000531050 PLA2G2DQ9UNK4 145 aa4.78□□□□□ -1.64
PTPRK-219ENST00000531050 DEFB4AO15263 64 aa4.77□□□□□ -1.65
PTPRK-219ENST00000531050 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
PTPRK-219ENST00000531050 SMR3AQ99954 134 aa4.76□□□□□ -1.65
PTPRK-219ENST00000531050 ACANP16112 2415 aa4.76□□□□□ -1.65
PTPRK-219ENST00000531050 SETD2Q9BYW2 2564 aaPredicted RBP4.76□□□□□ -1.65
PTPRK-219ENST00000531050 IGHV6-1A0A0B4J1U7 121 aa4.76□□□□□ -1.65
PTPRK-219ENST00000531050 ZNF861PO60384 105 aa4.76□□□□□ -1.65
PTPRK-219ENST00000531050 MTORP42345 2549 aa4.75□□□□□ -1.65
PTPRK-219ENST00000531050 REG3GQ6UW15 175 aa4.75□□□□□ -1.65
PTPRK-219ENST00000531050 A0A1B0GU69 56 aa4.74□□□□□ -1.65
PTPRK-219ENST00000531050 F8P00451 2351 aa4.73□□□□□ -1.65
PTPRK-219ENST00000531050 TENM2Q9NT68 2774 aa4.73□□□□□ -1.65
PTPRK-219ENST00000531050 TLX1NBP0CAT3 122 aa4.73□□□□□ -1.65
PTPRK-219ENST00000531050 UQCR11O14957 56 aa4.72□□□□□ -1.65
PTPRK-219ENST00000531050 HTN3P15516 51 aa4.72□□□□□ -1.65
PTPRK-219ENST00000531050 MAST4O15021 2626 aa4.72□□□□□ -1.65
PTPRK-219ENST00000531050 ACYP2P14621 99 aa4.7□□□□□ -1.66
PTPRK-219ENST00000531050 DEFB135Q30KP9 77 aa4.7□□□□□ -1.66
PTPRK-219ENST00000531050 KRTAP25-1Q3LHN0 102 aa4.7□□□□□ -1.66
PTPRK-219ENST00000531050 C8orf17Q9NRJ1 99 aa4.7□□□□□ -1.66
PTPRK-219ENST00000531050 P0C880 135 aa4.69□□□□□ -1.66
PTPRK-219ENST00000531050 HIVEP2P31629 2446 aa4.69□□□□□ -1.66
PTPRK-219ENST00000531050 K7EIL1 84 aa4.69□□□□□ -1.66
PTPRK-219ENST00000531050 PRLHP81277 87 aa4.69□□□□□ -1.66
PTPRK-219ENST00000531050 INAFM1C9JVW0 142 aa4.68□□□□□ -1.66
PTPRK-219ENST00000531050 Q96NJ1 140 aa4.68□□□□□ -1.66
PTPRK-219ENST00000531050 HIVEP1P15822 2718 aa4.68□□□□□ -1.66
PTPRK-219ENST00000531050 DMAC1Q96GE9 116 aa4.67□□□□□ -1.66
PTPRK-219ENST00000531050 SRRM2Q9UQ35 2752 aaKnown RBP4.66□□□□□ -1.66
PTPRK-219ENST00000531050 VWFP04275 2813 aa4.66□□□□□ -1.66
PTPRK-219ENST00000531050 KRTAP13-3Q3SY46 172 aa4.65□□□□□ -1.66
PTPRK-219ENST00000531050 SPRR1BP22528 89 aa4.65□□□□□ -1.67
PTPRK-219ENST00000531050 Q5W150 140 aa4.65□□□□□ -1.67
PTPRK-219ENST00000531050 MRPL34Q9BQ48 92 aaKnown RBP4.65□□□□□ -1.67
PTPRK-219ENST00000531050 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
PTPRK-219ENST00000531050 TEP1Q99973 2627 aaKnown RBP4.64□□□□□ -1.67
PTPRK-219ENST00000531050 SPART-AS1P0CW21 52 aa4.64□□□□□ -1.67
PTPRK-219ENST00000531050 IGLV5-52A0A0A0MRZ9 124 aa4.63□□□□□ -1.67
PTPRK-219ENST00000531050 CSMD3Q7Z407 3707 aa4.63□□□□□ -1.67
PTPRK-219ENST00000531050 A0A1B0GVX0 72 aa4.63□□□□□ -1.67
PTPRK-219ENST00000531050 NSD1Q96L73 2696 aaPredicted RBP4.62□□□□□ -1.67
PTPRK-219ENST00000531050 A0A096LNI7 61 aa4.62□□□□□ -1.67
PTPRK-219ENST00000531050 NOTCH2NLQ7Z3S9 236 aa4.62□□□□□ -1.67
PTPRK-219ENST00000531050 TENM1Q9UKZ4 2725 aa4.62□□□□□ -1.67
PTPRK-219ENST00000531050 A8MUU9 505 aa4.62□□□□□ -1.67
PTPRK-219ENST00000531050 LCE2BO14633 110 aa4.61□□□□□ -1.67
PTPRK-219ENST00000531050 CASC10Q5T4H9 136 aa4.6□□□□□ -1.67
PTPRK-219ENST00000531050 IGLV7-43P04211 117 aa4.6□□□□□ -1.67
PTPRK-219ENST00000531050 LINC00483Q53H64 154 aa4.59□□□□□ -1.67
PTPRK-219ENST00000531050 LINC01556Q5JQF7 62 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms