RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 KCNQ1DNQ9H478 68 aa7.39□□□□□ -1.23
USP35-207ENST00000530546 KRTAP7-1Q8IUC3 87 aa7.39□□□□□ -1.23
USP35-207ENST00000530546 RBM12B-AS1Q9P1G2 102 aa7.39□□□□□ -1.23
USP35-207ENST00000530546 UBE2BP63146 152 aa7.38□□□□□ -1.23
USP35-207ENST00000530546 IGLV5-48A0A075B6I7 105 aa7.38□□□□□ -1.23
USP35-207ENST00000530546 H3BS24 57 aa7.37□□□□□ -1.23
USP35-207ENST00000530546 PLA2G2DQ9UNK4 145 aa7.36□□□□□ -1.23
USP35-207ENST00000530546 IGLV1-50A0A075B6I6 118 aa7.36□□□□□ -1.23
USP35-207ENST00000530546 A0A096LNI7 61 aa7.35□□□□□ -1.23
USP35-207ENST00000530546 A8MUN3 132 aa7.35□□□□□ -1.23
USP35-207ENST00000530546 UBE2AP49459 152 aa7.35□□□□□ -1.23
USP35-207ENST00000530546 PLECQ15149 4684 aaKnown RBP7.34□□□□□ -1.23
USP35-207ENST00000530546 CSMD3Q7Z407 3707 aa7.34□□□□□ -1.23
USP35-207ENST00000530546 KTN1-AS1Q86SY8 53 aa7.34□□□□□ -1.23
USP35-207ENST00000530546 Q5VV11 94 aa7.34□□□□□ -1.23
USP35-207ENST00000530546 IGLV5-37A0A075B6J1 123 aa7.33□□□□□ -1.24
USP35-207ENST00000530546 DNAH7Q8WXX0 4024 aa7.33□□□□□ -1.24
USP35-207ENST00000530546 Q9BRP9 147 aa7.33□□□□□ -1.24
USP35-207ENST00000530546 Q6ZRX8 168 aa7.32□□□□□ -1.24
USP35-207ENST00000530546 ST20-AS1Q8NBB2 130 aa7.32□□□□□ -1.24
USP35-207ENST00000530546 LIMD2Q9BT23 127 aa7.32□□□□□ -1.24
USP35-207ENST00000530546 NUPR2A6NF83 97 aa7.32□□□□□ -1.24
USP35-207ENST00000530546 CHTF8P0CG12 524 aa7.32□□□□□ -1.24
USP35-207ENST00000530546 Q8N377 158 aa7.32□□□□□ -1.24
USP35-207ENST00000530546 A0A1W2PNN7 141 aa7.31□□□□□ -1.24
USP35-207ENST00000530546 KRTAP4-16G5E9R7 235 aaPredicted RBP7.31□□□□□ -1.24
USP35-207ENST00000530546 NBDYA0A0U1RRE5 68 aa7.3□□□□□ -1.24
USP35-207ENST00000530546 DSCR10P59022 87 aa7.3□□□□□ -1.24
USP35-207ENST00000530546 DHRS4-AS1Q9P1J3 65 aa7.3□□□□□ -1.24
USP35-207ENST00000530546 DYNC2H1Q8NCM8 4307 aaKnown RBP7.3□□□□□ -1.24
USP35-207ENST00000530546 A0A1W2PNM2 257 aa7.3□□□□□ -1.24
USP35-207ENST00000530546 CNBPP62633 177 aaKnown RBP7.3□□□□□ -1.24
USP35-207ENST00000530546 Q8NBF4 154 aa7.3□□□□□ -1.24
USP35-207ENST00000530546 C16orf90A8MZG2 172 aa7.29□□□□□ -1.24
USP35-207ENST00000530546 HCG22E2RYF7 251 aa7.29□□□□□ -1.24
USP35-207ENST00000530546 SPRR1AP35321 89 aa7.29□□□□□ -1.24
USP35-207ENST00000530546 REG3GQ6UW15 175 aa7.29□□□□□ -1.24
USP35-207ENST00000530546 SPRR4Q96PI1 79 aa7.29□□□□□ -1.24
USP35-207ENST00000530546 SPANXA2-OT1Q8N9U9 137 aa7.29□□□□□ -1.24
USP35-207ENST00000530546 K7EQZ3 153 aa7.28□□□□□ -1.24
USP35-207ENST00000530546 MP68P56378 58 aa7.28□□□□□ -1.24
USP35-207ENST00000530546 PRR4Q16378 134 aa7.28□□□□□ -1.24
USP35-207ENST00000530546 PRKDCP78527 4128 aaKnown RBP7.28□□□□□ -1.24
USP35-207ENST00000530546 NDUFS5O43920 106 aa7.28□□□□□ -1.24
USP35-207ENST00000530546 C14orf177Q52M58 125 aa7.28□□□□□ -1.24
USP35-207ENST00000530546 C1orf137Q5JT78 98 aa7.28□□□□□ -1.24
USP35-207ENST00000530546 ATP11AUNQ6ZP68 121 aa7.28□□□□□ -1.24
USP35-207ENST00000530546 CHKB-CPT1BH3BT56 60 aa7.27□□□□□ -1.25
USP35-207ENST00000530546 TNP2Q05952 138 aa7.27□□□□□ -1.25
USP35-207ENST00000530546 PRLHP81277 87 aa7.27□□□□□ -1.25
USP35-207ENST00000530546 Q8N9P0 234 aaPredicted RBP7.27□□□□□ -1.25
USP35-207ENST00000530546 DNHD1Q96M86 4753 aa7.27□□□□□ -1.25
USP35-207ENST00000530546 STARD9Q9P2P6 4700 aa7.26□□□□□ -1.25
USP35-207ENST00000530546 PHF5AQ7RTV0 110 aaKnown RBP7.26□□□□□ -1.25
USP35-207ENST00000530546 A8MU10 97 aa7.26□□□□□ -1.25
USP35-207ENST00000530546 MEGF8Q7Z7M0 2845 aa7.25□□□□□ -1.25
USP35-207ENST00000530546 LINC00208Q96KT6 92 aa7.25□□□□□ -1.25
USP35-207ENST00000530546 H3BPC8 53 aa7.24□□□□□ -1.25
USP35-207ENST00000530546 Q75L30 129 aa7.23□□□□□ -1.25
USP35-207ENST00000530546 KRTAP11-1Q8IUC1 163 aa7.23□□□□□ -1.25
USP35-207ENST00000530546 Q6ZRN7 208 aaPredicted RBP7.23□□□□□ -1.25
USP35-207ENST00000530546 C9orf163Q8N9P6 203 aa7.23□□□□□ -1.25
USP35-207ENST00000530546 PRR15LQ9BU68 103 aa7.23□□□□□ -1.25
USP35-207ENST00000530546 C8orf87E5RJ46 101 aa7.22□□□□□ -1.25
USP35-207ENST00000530546 PANO1I0J062 215 aa7.21□□□□□ -1.25
USP35-207ENST00000530546 LOC101927531A0A1B0GV80 90 aa7.21□□□□□ -1.26
USP35-207ENST00000530546 A0A0G2JQZ4 141 aa7.2□□□□□ -1.26
USP35-207ENST00000530546 SPTSSBQ8NFR3 76 aa7.2□□□□□ -1.26
USP35-207ENST00000530546 A6NN06 94 aa7.2□□□□□ -1.26
USP35-207ENST00000530546 LCA10Q71F78 164 aa7.19□□□□□ -1.26
USP35-207ENST00000530546 VPS13DQ5THJ4 4388 aa7.18□□□□□ -1.26
USP35-207ENST00000530546 A6NED7 52 aa7.17□□□□□ -1.26
USP35-207ENST00000530546 CDC42SE1Q9NRR8 79 aa7.17□□□□□ -1.26
USP35-207ENST00000530546 SRRM2Q9UQ35 2752 aaKnown RBP7.16□□□□□ -1.26
USP35-207ENST00000530546 A0A087WTM6 91 aa7.16□□□□□ -1.26
USP35-207ENST00000530546 H0Y9P7 68 aa7.16□□□□□ -1.26
USP35-207ENST00000530546 LINC00476Q8WZB0 136 aa7.16□□□□□ -1.26
USP35-207ENST00000530546 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.16□□□□□ -1.26
USP35-207ENST00000530546 WFDC13Q8IUB5 93 aa7.15□□□□□ -1.26
USP35-207ENST00000530546 PRR26Q8N8Z3 221 aa7.15□□□□□ -1.26
USP35-207ENST00000530546 C7orf65Q6ZTY9 151 aa7.15□□□□□ -1.27
USP35-207ENST00000530546 KRTAP29-1A8MX34 341 aaPredicted RBP7.14□□□□□ -1.27
USP35-207ENST00000530546 KMT2AQ03164 3969 aa7.13□□□□□ -1.27
USP35-207ENST00000530546 LY6G6CO95867 125 aa7.13□□□□□ -1.27
USP35-207ENST00000530546 TGP01266 2768 aa7.12□□□□□ -1.27
USP35-207ENST00000530546 FBN3Q75N90 2809 aa7.12□□□□□ -1.27
USP35-207ENST00000530546 RTL8CO15255 209 aa7.11□□□□□ -1.27
USP35-207ENST00000530546 IGFL1Q6UW32 110 aa7.11□□□□□ -1.27
USP35-207ENST00000530546 COA5Q86WW8 74 aa7.11□□□□□ -1.27
USP35-207ENST00000530546 DEFB116Q30KQ4 102 aa7.11□□□□□ -1.27
USP35-207ENST00000530546 Q6ZR54 194 aa7.11□□□□□ -1.27
USP35-207ENST00000530546 SPACA4Q8TDM5 124 aa7.11□□□□□ -1.27
USP35-207ENST00000530546 CASC2Q6XLA1 102 aa7.1□□□□□ -1.27
USP35-207ENST00000530546 IGLV7-46A0A075B6I9 117 aa7.09□□□□□ -1.27
USP35-207ENST00000530546 DNAH2Q9P225 4427 aa7.09□□□□□ -1.28
USP35-207ENST00000530546 C1orf134Q5TEV5 83 aa7.08□□□□□ -1.28
USP35-207ENST00000530546 LINC01558Q9Y6Z2 57 aa7.08□□□□□ -1.28
USP35-207ENST00000530546 PLAC8Q9NZF1 115 aa7.07□□□□□ -1.28
USP35-207ENST00000530546 IGLV8-61A0A075B6I0 122 aa7.07□□□□□ -1.28
USP35-207ENST00000530546 H0Y9J4 135 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms