RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 FABP9Q0Z7S8 132 aa3.99□□□□□ -1.77
USP48-212ENST00000527823 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
USP48-212ENST00000527823 COMMD7Q86VX2 200 aa3.98□□□□□ -1.77
USP48-212ENST00000527823 DEFB105AQ8NG35 78 aa3.98□□□□□ -1.77
USP48-212ENST00000527823 C20orf166-AS1Q96NR2 134 aa3.98□□□□□ -1.77
USP48-212ENST00000527823 TEX49A0A1B0GTD5 131 aa3.97□□□□□ -1.77
USP48-212ENST00000527823 HINT1P49773 126 aaPredicted RBP3.97□□□□□ -1.77
USP48-212ENST00000527823 PCP2Q8IVA1 136 aa3.97□□□□□ -1.77
USP48-212ENST00000527823 SEC11CQ9BY50 192 aa3.97□□□□□ -1.77
USP48-212ENST00000527823 IGLV5-48A0A075B6I7 105 aa3.96□□□□□ -1.78
USP48-212ENST00000527823 TRBV20-1A0A075B6N2 111 aa3.96□□□□□ -1.78
USP48-212ENST00000527823 TCL1BO95988 128 aa3.96□□□□□ -1.78
USP48-212ENST00000527823 TAL2Q16559 108 aa3.96□□□□□ -1.78
USP48-212ENST00000527823 IFI27L1Q96BM0 104 aa3.96□□□□□ -1.78
USP48-212ENST00000527823 J3QQQ9 107 aa3.95□□□□□ -1.78
USP48-212ENST00000527823 LEPROTO15243 131 aa3.95□□□□□ -1.78
USP48-212ENST00000527823 COX7BP24311 80 aa3.95□□□□□ -1.78
USP48-212ENST00000527823 COX19Q49B96 90 aa3.95□□□□□ -1.78
USP48-212ENST00000527823 C6orf99Q4VX62 202 aa3.95□□□□□ -1.78
USP48-212ENST00000527823 C10orf91Q5T1B1 145 aa3.95□□□□□ -1.78
USP48-212ENST00000527823 FAM236DA0A1B0GTK5 79 aa3.94□□□□□ -1.78
USP48-212ENST00000527823 FAM236CP0DP71 79 aa3.94□□□□□ -1.78
USP48-212ENST00000527823 LGALS3P17931 250 aaKnown RBP3.94□□□□□ -1.78
USP48-212ENST00000527823 S100PP25815 95 aa3.94□□□□□ -1.78
USP48-212ENST00000527823 IFITM2Q01629 132 aa3.94□□□□□ -1.78
USP48-212ENST00000527823 CBY1Q9Y3M2 126 aa3.94□□□□□ -1.78
USP48-212ENST00000527823 A8MUU9 505 aa3.93□□□□□ -1.78
USP48-212ENST00000527823 NMUP48645 174 aa3.93□□□□□ -1.78
USP48-212ENST00000527823 IGFL1Q6UW32 110 aa3.93□□□□□ -1.78
USP48-212ENST00000527823 SPANXCQ9NY87 97 aa3.93□□□□□ -1.78
USP48-212ENST00000527823 MDN1Q9NU22 5596 aa3.93□□□□□ -1.78
USP48-212ENST00000527823 A0A0J9YXY3 114 aa3.92□□□□□ -1.78
USP48-212ENST00000527823 H0Y8G0 127 aa3.92□□□□□ -1.78
USP48-212ENST00000527823 RHEBQ15382 184 aa3.92□□□□□ -1.78
USP48-212ENST00000527823 LINC00518Q8N0U6 118 aa3.92□□□□□ -1.78
USP48-212ENST00000527823 OR13C6PQ8NH95 151 aa3.92□□□□□ -1.78
USP48-212ENST00000527823 Q96NJ1 140 aa3.92□□□□□ -1.78
USP48-212ENST00000527823 SPANXDQ9BXN6 97 aa3.92□□□□□ -1.78
USP48-212ENST00000527823 TRBV7-7A0A0K0K1E9 115 aa3.91□□□□□ -1.78
USP48-212ENST00000527823 HRES1P13985 223 aa3.91□□□□□ -1.78
USP48-212ENST00000527823 LINC00308Q8TCZ7 52 aa3.9□□□□□ -1.79
USP48-212ENST00000527823 TRAPPC1Q9Y5R8 145 aa3.9□□□□□ -1.79
USP48-212ENST00000527823 KMT2DO14686 5537 aa3.89□□□□□ -1.79
USP48-212ENST00000527823 HERVK_113P61574 105 aa3.89□□□□□ -1.79
USP48-212ENST00000527823 CHCHD1Q96BP2 118 aaKnown RBP3.89□□□□□ -1.79
USP48-212ENST00000527823 TRBV7-6A0A0J9YX20 115 aa3.88□□□□□ -1.79
USP48-212ENST00000527823 TMEM218A2RU14 115 aa3.88□□□□□ -1.79
USP48-212ENST00000527823 PLNP26678 52 aa3.88□□□□□ -1.79
USP48-212ENST00000527823 CLEC2BQ92478 149 aa3.88□□□□□ -1.79
USP48-212ENST00000527823 PMCHL2Q9BQD1 86 aa3.88□□□□□ -1.79
USP48-212ENST00000527823 A0A1B0GWB2 263 aa3.87□□□□□ -1.79
USP48-212ENST00000527823 F8WEM9 126 aa3.86□□□□□ -1.79
USP48-212ENST00000527823 DPM2O94777 84 aa3.86□□□□□ -1.79
USP48-212ENST00000527823 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
USP48-212ENST00000527823 RBM12B-AS1Q9P1G2 102 aa3.86□□□□□ -1.79
USP48-212ENST00000527823 E9PLD3 99 aa3.84□□□□□ -1.79
USP48-212ENST00000527823 TIMM17BO60830 172 aa3.84□□□□□ -1.79
USP48-212ENST00000527823 HSBP1O75506 76 aa3.84□□□□□ -1.79
USP48-212ENST00000527823 IGKCP01834 107 aa3.84□□□□□ -1.79
USP48-212ENST00000527823 UQCC3Q6UW78 93 aa3.84□□□□□ -1.79
USP48-212ENST00000527823 LST1O00453 97 aa3.83□□□□□ -1.8
USP48-212ENST00000527823 CLLU1Q5K131 121 aa3.83□□□□□ -1.8
USP48-212ENST00000527823 Q6JHZ5 121 aa3.83□□□□□ -1.8
USP48-212ENST00000527823 LEPROTL1O95214 131 aa3.82□□□□□ -1.8
USP48-212ENST00000527823 KRTAP5-9P26371 169 aa3.82□□□□□ -1.8
USP48-212ENST00000527823 A8MWP4 228 aa3.81□□□□□ -1.8
USP48-212ENST00000527823 SERF1AO75920 110 aa3.81□□□□□ -1.8
USP48-212ENST00000527823 Q6ZVH6 145 aa3.81□□□□□ -1.8
USP48-212ENST00000527823 NHP2Q9NX24 153 aaKnown RBP3.81□□□□□ -1.8
USP48-212ENST00000527823 TRAV13-2A0A0B4J235 113 aa3.8□□□□□ -1.8
USP48-212ENST00000527823 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
USP48-212ENST00000527823 TTTY13Q9BZ97 58 aa3.8□□□□□ -1.8
USP48-212ENST00000527823 Q6ZQY7 126 aa3.79□□□□□ -1.8
USP48-212ENST00000527823 A6NDN8 102 aa3.78□□□□□ -1.8
USP48-212ENST00000527823 ZNF815PA8K554 130 aa3.78□□□□□ -1.8
USP48-212ENST00000527823 H3BUT2 72 aa3.78□□□□□ -1.8
USP48-212ENST00000527823 CXCL6P80162 114 aa3.78□□□□□ -1.8
USP48-212ENST00000527823 SMIM11BQ8TCY0 68 aa3.78□□□□□ -1.8
USP48-212ENST00000527823 YPEL4Q96NS1 127 aa3.78□□□□□ -1.8
USP48-212ENST00000527823 SS18L2Q9UHA2 77 aa3.78□□□□□ -1.8
USP48-212ENST00000527823 FABP4P15090 132 aa3.77□□□□□ -1.81
USP48-212ENST00000527823 OCIAD2Q56VL3 154 aa3.77□□□□□ -1.81
USP48-212ENST00000527823 SLC7A5P1Q8MH63 180 aa3.77□□□□□ -1.81
USP48-212ENST00000527823 HSPB8Q9UJY1 196 aa3.77□□□□□ -1.81
USP48-212ENST00000527823 SIGMAR1Q99720 223 aa3.76□□□□□ -1.81
USP48-212ENST00000527823 A6NN06 94 aa3.75□□□□□ -1.81
USP48-212ENST00000527823 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
USP48-212ENST00000527823 LINC00575Q6W349 94 aa3.75□□□□□ -1.81
USP48-212ENST00000527823 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
USP48-212ENST00000527823 A0A087WSZ3 146 aa3.74□□□□□ -1.81
USP48-212ENST00000527823 COLCA2A8K830 154 aa3.74□□□□□ -1.81
USP48-212ENST00000527823 A8MU10 97 aa3.74□□□□□ -1.81
USP48-212ENST00000527823 MTURNQ8N3F0 131 aa3.74□□□□□ -1.81
USP48-212ENST00000527823 hADV29S1A0JD25 119 aa3.72□□□□□ -1.81
USP48-212ENST00000527823 TRGC2P03986 189 aa3.71□□□□□ -1.82
USP48-212ENST00000527823 MT1BP07438 61 aa3.71□□□□□ -1.82
USP48-212ENST00000527823 IFITM1P13164 125 aa3.71□□□□□ -1.82
USP48-212ENST00000527823 LINC00313P59037 77 aa3.71□□□□□ -1.82
USP48-212ENST00000527823 MUSTN1Q8IVN3 82 aa3.71□□□□□ -1.82
USP48-212ENST00000527823 SYS1-DBNDD2H3BUS1 97 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 856.5 ms