RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 LINC00337Q8N6G1 96 aa7.33□□□□□ -1.24
CAPN1-204ENST00000526468 ZNF561-AS1K7EIQ3 104 aa7.32□□□□□ -1.24
CAPN1-204ENST00000526468 LINC00474Q9P2X8 69 aa7.32□□□□□ -1.24
CAPN1-204ENST00000526468 PRO0628Q9UI54 55 aa7.32□□□□□ -1.24
CAPN1-204ENST00000526468 IGKV2-28A0A075B6P5 120 aa7.31□□□□□ -1.24
CAPN1-204ENST00000526468 SMIM26A0A096LP01 95 aa7.31□□□□□ -1.24
CAPN1-204ENST00000526468 IGKV2D-28P01615 120 aa7.31□□□□□ -1.24
CAPN1-204ENST00000526468 SPINK6Q6UWN8 80 aa7.3□□□□□ -1.24
CAPN1-204ENST00000526468 IGHV3OR16-9A0A0B4J2B5 98 aa7.29□□□□□ -1.24
CAPN1-204ENST00000526468 IGKV3D-7A0A0C4DH55 119 aa7.29□□□□□ -1.24
CAPN1-204ENST00000526468 SS18Q15532 418 aa7.29□□□□□ -1.24
CAPN1-204ENST00000526468 LAMTOR3Q9UHA4 124 aa7.29□□□□□ -1.24
CAPN1-204ENST00000526468 Q6ZRP5 223 aa7.28□□□□□ -1.24
CAPN1-204ENST00000526468 LINC00959A0A1B0GUT2 108 aa7.27□□□□□ -1.25
CAPN1-204ENST00000526468 A0A1B0GW54 56 aa7.27□□□□□ -1.25
CAPN1-204ENST00000526468 RBM3P98179 157 aaKnown RBP7.27□□□□□ -1.25
CAPN1-204ENST00000526468 SYCNQ0VAF6 134 aa7.27□□□□□ -1.25
CAPN1-204ENST00000526468 DSCR8Q96T75 97 aa7.26□□□□□ -1.25
CAPN1-204ENST00000526468 TRBV7-6A0A0J9YX20 115 aa7.25□□□□□ -1.25
CAPN1-204ENST00000526468 PFN2P35080 140 aa7.25□□□□□ -1.25
CAPN1-204ENST00000526468 C6orf226Q5I0X4 101 aa7.25□□□□□ -1.25
CAPN1-204ENST00000526468 TOMM7Q9P0U1 55 aa7.25□□□□□ -1.25
CAPN1-204ENST00000526468 A0A0U1RRA0 63 aa7.24□□□□□ -1.25
CAPN1-204ENST00000526468 KRTAP10-8P60410 259 aa7.24□□□□□ -1.25
CAPN1-204ENST00000526468 CD164L2Q6UWJ8 174 aa7.24□□□□□ -1.25
CAPN1-204ENST00000526468 LPAP08519 4548 aa7.24□□□□□ -1.25
CAPN1-204ENST00000526468 NCR3O14931 201 aa7.23□□□□□ -1.25
CAPN1-204ENST00000526468 Q5XG85 94 aa7.23□□□□□ -1.25
CAPN1-204ENST00000526468 CAMK2N2Q96S95 79 aa7.23□□□□□ -1.25
CAPN1-204ENST00000526468 Q6ZQT0 140 aa7.22□□□□□ -1.25
CAPN1-204ENST00000526468 C20orf197Q8N268 126 aa7.22□□□□□ -1.25
CAPN1-204ENST00000526468 H7BZZ5 65 aa7.21□□□□□ -1.26
CAPN1-204ENST00000526468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.21□□□□□ -1.26
CAPN1-204ENST00000526468 SPAG11BQ08648 103 aa7.2□□□□□ -1.26
CAPN1-204ENST00000526468 C9orf116Q5BN46 136 aaPredicted RBP7.2□□□□□ -1.26
CAPN1-204ENST00000526468 C1orf137Q5JT78 98 aa7.2□□□□□ -1.26
CAPN1-204ENST00000526468 LINC00575Q6W349 94 aa7.2□□□□□ -1.26
CAPN1-204ENST00000526468 PSORS1C2Q9UIG4 136 aa7.2□□□□□ -1.26
CAPN1-204ENST00000526468 TRAV23DV6A0A075B6W5 121 aa7.19□□□□□ -1.26
CAPN1-204ENST00000526468 A0A087WVE0 104 aa7.19□□□□□ -1.26
CAPN1-204ENST00000526468 A0A1W2PNN7 141 aa7.19□□□□□ -1.26
CAPN1-204ENST00000526468 LINC01547P58512 204 aaPredicted RBP7.18□□□□□ -1.26
CAPN1-204ENST00000526468 PHF5AQ7RTV0 110 aaKnown RBP7.18□□□□□ -1.26
CAPN1-204ENST00000526468 HRCT1Q6UXD1 115 aa7.17□□□□□ -1.26
CAPN1-204ENST00000526468 Q6ZVQ6 151 aa7.16□□□□□ -1.26
CAPN1-204ENST00000526468 F8WDY8 70 aa7.15□□□□□ -1.26
CAPN1-204ENST00000526468 PRR26Q8N8Z3 221 aa7.15□□□□□ -1.26
CAPN1-204ENST00000526468 DIRC1Q969H9 104 aa7.15□□□□□ -1.26
CAPN1-204ENST00000526468 IGLV7-43P04211 117 aa7.14□□□□□ -1.27
CAPN1-204ENST00000526468 C6orf99Q4VX62 202 aa7.14□□□□□ -1.27
CAPN1-204ENST00000526468 TRBV7-4A0A0J9YYF1 115 aa7.13□□□□□ -1.27
CAPN1-204ENST00000526468 FAM168BA1KXE4 195 aa7.13□□□□□ -1.27
CAPN1-204ENST00000526468 COX7BP24311 80 aa7.13□□□□□ -1.27
CAPN1-204ENST00000526468 C4orf26Q17RF5 130 aa7.13□□□□□ -1.27
CAPN1-204ENST00000526468 CYSTM1Q9H1C7 97 aa7.13□□□□□ -1.27
CAPN1-204ENST00000526468 H0Y9J4 135 aa7.12□□□□□ -1.27
CAPN1-204ENST00000526468 IGLV6-57P01721 117 aa7.12□□□□□ -1.27
CAPN1-204ENST00000526468 C9orf129Q5T035 196 aaKnown RBP7.12□□□□□ -1.27
CAPN1-204ENST00000526468 FAM19A1Q7Z5A9 133 aa7.12□□□□□ -1.27
CAPN1-204ENST00000526468 F8WEM9 126 aa7.1□□□□□ -1.27
CAPN1-204ENST00000526468 UBE2BP63146 152 aa7.1□□□□□ -1.27
CAPN1-204ENST00000526468 NREPQ16612 68 aa7.1□□□□□ -1.27
CAPN1-204ENST00000526468 IGLV1-50A0A075B6I6 118 aa7.09□□□□□ -1.27
CAPN1-204ENST00000526468 KRTAP11-1Q8IUC1 163 aa7.09□□□□□ -1.27
CAPN1-204ENST00000526468 TMEM254Q8TBM7 123 aa7.09□□□□□ -1.27
CAPN1-204ENST00000526468 C6orf48Q9UBA6 75 aa7.09□□□□□ -1.27
CAPN1-204ENST00000526468 V9GYY9 64 aa7.09□□□□□ -1.27
CAPN1-204ENST00000526468 PRYO14603 147 aa7.08□□□□□ -1.28
CAPN1-204ENST00000526468 KIAA0087Q14695 138 aa7.08□□□□□ -1.28
CAPN1-204ENST00000526468 C10orf25Q5T742 122 aa7.08□□□□□ -1.28
CAPN1-204ENST00000526468 TLX1NBP0CAT3 122 aa7.07□□□□□ -1.28
CAPN1-204ENST00000526468 PRR4Q16378 134 aa7.07□□□□□ -1.28
CAPN1-204ENST00000526468 UNQ6190/PRO20217Q6UXQ8 127 aa7.07□□□□□ -1.28
CAPN1-204ENST00000526468 BPY2O14599 106 aa7.06□□□□□ -1.28
CAPN1-204ENST00000526468 NDUFB1O75438 58 aa7.06□□□□□ -1.28
CAPN1-204ENST00000526468 KRTAP1-4P0C5Y4 121 aa7.06□□□□□ -1.28
CAPN1-204ENST00000526468 ELOF1P60002 83 aaKnown RBP7.06□□□□□ -1.28
CAPN1-204ENST00000526468 Q6ZQY7 126 aa7.05□□□□□ -1.28
CAPN1-204ENST00000526468 MUC2Q02817 5179 aa7.04□□□□□ -1.28
CAPN1-204ENST00000526468 ZNF73O43830 326 aaPredicted RBP7.03□□□□□ -1.28
CAPN1-204ENST00000526468 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
CAPN1-204ENST00000526468 A0A0U1RQV1 116 aa7.02□□□□□ -1.29
CAPN1-204ENST00000526468 M0R378 163 aa7.02□□□□□ -1.29
CAPN1-204ENST00000526468 C1orf195Q5TG92 126 aa7.01□□□□□ -1.29
CAPN1-204ENST00000526468 FP248Q71RG6 208 aaPredicted RBP7.01□□□□□ -1.29
CAPN1-204ENST00000526468 OCR1Q9BZK8 76 aa7□□□□□ -1.29
CAPN1-204ENST00000526468 PRR15Q8IV56 129 aa6.99□□□□□ -1.29
CAPN1-204ENST00000526468 SNURFQ9Y675 71 aa6.98□□□□□ -1.29
CAPN1-204ENST00000526468 H3BPC8 53 aa6.97□□□□□ -1.29
CAPN1-204ENST00000526468 ZNF861PO60384 105 aa6.97□□□□□ -1.29
CAPN1-204ENST00000526468 Q1T7F1 81 aa6.97□□□□□ -1.29
CAPN1-204ENST00000526468 BRK1Q8WUW1 75 aa6.97□□□□□ -1.29
CAPN1-204ENST00000526468 DHRS4-AS1Q9P1J3 65 aa6.97□□□□□ -1.29
CAPN1-204ENST00000526468 IGKV4-1P06312 121 aa6.96□□□□□ -1.3
CAPN1-204ENST00000526468 CYP4F30PQ9H0H9 118 aa6.96□□□□□ -1.3
CAPN1-204ENST00000526468 XAGE1AQ9HD64 81 aa6.96□□□□□ -1.3
CAPN1-204ENST00000526468 IGLV5-48A0A075B6I7 105 aa6.95□□□□□ -1.3
CAPN1-204ENST00000526468 A0A087X002 238 aa6.94□□□□□ -1.3
CAPN1-204ENST00000526468 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
CAPN1-204ENST00000526468 MRPL55Q7Z7F7 128 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms