RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 SPACA4Q8TDM5 124 aa2.76□□□□□ -1.97
USP48-211ENST00000526044 C7orf33Q8WU49 177 aa2.76□□□□□ -1.97
USP48-211ENST00000526044 NDUFC2O95298 119 aa2.75□□□□□ -1.97
USP48-211ENST00000526044 HRCT1Q6UXD1 115 aa2.75□□□□□ -1.97
USP48-211ENST00000526044 SOSTDC1Q6X4U4 206 aa2.75□□□□□ -1.97
USP48-211ENST00000526044 C2orf91Q6ZV80 131 aa2.75□□□□□ -1.97
USP48-211ENST00000526044 PLAC8Q9NZF1 115 aa2.75□□□□□ -1.97
USP48-211ENST00000526044 TP73-AS1Q9UF72 201 aa2.75□□□□□ -1.97
USP48-211ENST00000526044 C22orf24Q9Y442 160 aa2.75□□□□□ -1.97
USP48-211ENST00000526044 DYNC1H1Q14204 4646 aaKnown RBP2.75□□□□□ -1.97
USP48-211ENST00000526044 DNAH8Q96JB1 4490 aa2.74□□□□□ -1.97
USP48-211ENST00000526044 DNAH5Q8TE73 4624 aa2.74□□□□□ -1.97
USP48-211ENST00000526044 M0R378 163 aa2.74□□□□□ -1.97
USP48-211ENST00000526044 Q6ZSA8 131 aa2.74□□□□□ -1.97
USP48-211ENST00000526044 CEND1Q8N111 149 aa2.74□□□□□ -1.97
USP48-211ENST00000526044 CIRBP-AS1Q8TBR5 109 aa2.74□□□□□ -1.97
USP48-211ENST00000526044 TMEM126AQ9H061 195 aa2.74□□□□□ -1.97
USP48-211ENST00000526044 TRBV10-2A0A0K0K1G8 114 aa2.73□□□□□ -1.97
USP48-211ENST00000526044 A0A1B0GX51 115 aa2.73□□□□□ -1.97
USP48-211ENST00000526044 NCR3O14931 201 aa2.73□□□□□ -1.97
USP48-211ENST00000526044 SCGB1C2P0DMR2 95 aa2.73□□□□□ -1.97
USP48-211ENST00000526044 UBE2BP63146 152 aa2.73□□□□□ -1.97
USP48-211ENST00000526044 HSD52Q0P140 79 aa2.73□□□□□ -1.97
USP48-211ENST00000526044 S100A7L2Q5SY68 101 aa2.73□□□□□ -1.97
USP48-211ENST00000526044 SCXQ7RTU7 201 aa2.73□□□□□ -1.97
USP48-211ENST00000526044 PHF5AQ7RTV0 110 aaKnown RBP2.73□□□□□ -1.97
USP48-211ENST00000526044 Q8NDZ9 215 aa2.73□□□□□ -1.97
USP48-211ENST00000526044 LINC00167Q96N53 147 aa2.73□□□□□ -1.97
USP48-211ENST00000526044 IGLV1-50A0A075B6I6 118 aa2.72□□□□□ -1.97
USP48-211ENST00000526044 IGKV2-28A0A075B6P5 120 aa2.72□□□□□ -1.97
USP48-211ENST00000526044 TRAV13-2A0A0B4J235 113 aa2.72□□□□□ -1.97
USP48-211ENST00000526044 LST1O00453 97 aa2.72□□□□□ -1.97
USP48-211ENST00000526044 IGKV2D-28P01615 120 aa2.72□□□□□ -1.97
USP48-211ENST00000526044 HINT1P49773 126 aaPredicted RBP2.72□□□□□ -1.97
USP48-211ENST00000526044 HAMPP81172 84 aa2.72□□□□□ -1.97
USP48-211ENST00000526044 RAB37Q96AX2 223 aa2.72□□□□□ -1.97
USP48-211ENST00000526044 HECTD4Q9Y4D8 3996 aa2.72□□□□□ -1.97
USP48-211ENST00000526044 TRBV10-3A0A0K0K1G6 114 aa2.71□□□□□ -1.98
USP48-211ENST00000526044 A8MUN3 132 aa2.71□□□□□ -1.98
USP48-211ENST00000526044 M0R143 59 aa2.71□□□□□ -1.98
USP48-211ENST00000526044 SMR3BP02814 79 aaPredicted RBP2.71□□□□□ -1.98
USP48-211ENST00000526044 FXYD2P54710 66 aa2.71□□□□□ -1.98
USP48-211ENST00000526044 RPS28P62857 69 aaKnown RBP2.71□□□□□ -1.98
USP48-211ENST00000526044 BVES-AS1Q5T3Y7 98 aa2.71□□□□□ -1.98
USP48-211ENST00000526044 PRO1854Q9UHT4 67 aa2.71□□□□□ -1.98
USP48-211ENST00000526044 PRO0461Q9UI25 63 aa2.71□□□□□ -1.98
USP48-211ENST00000526044 EPPK1P58107 5090 aaKnown RBP2.71□□□□□ -1.98
USP48-211ENST00000526044 LRP1BQ9NZR2 4599 aa2.7□□□□□ -1.98
USP48-211ENST00000526044 A0A0B4J2C4 111 aa2.7□□□□□ -1.98
USP48-211ENST00000526044 C9JAW5 83 aa2.7□□□□□ -1.98
USP48-211ENST00000526044 IGLV6-57P01721 117 aa2.7□□□□□ -1.98
USP48-211ENST00000526044 KCNQ1DNQ9H478 68 aa2.7□□□□□ -1.98
USP48-211ENST00000526044 NHP2Q9NX24 153 aaKnown RBP2.7□□□□□ -1.98
USP48-211ENST00000526044 TRAV23DV6A0A075B6W5 121 aa2.69□□□□□ -1.98
USP48-211ENST00000526044 H7C2G1 150 aa2.69□□□□□ -1.98
USP48-211ENST00000526044 C1orf137Q5JT78 98 aa2.69□□□□□ -1.98
USP48-211ENST00000526044 PSORS1C2Q9UIG4 136 aa2.69□□□□□ -1.98
USP48-211ENST00000526044 PKHD1P08F94 4074 aa2.68□□□□□ -1.98
USP48-211ENST00000526044 APOBP04114 4563 aaKnown RBP2.68□□□□□ -1.98
USP48-211ENST00000526044 ETDCA0A1B0GVM5 59 aa2.68□□□□□ -1.98
USP48-211ENST00000526044 ZNF73O43830 326 aaPredicted RBP2.68□□□□□ -1.98
USP48-211ENST00000526044 BCE1O60756 84 aa2.68□□□□□ -1.98
USP48-211ENST00000526044 SPRR1AP35321 89 aa2.68□□□□□ -1.98
USP48-211ENST00000526044 RPL28P46779 137 aaKnown RBP2.68□□□□□ -1.98
USP48-211ENST00000526044 UBE2AP49459 152 aa2.68□□□□□ -1.98
USP48-211ENST00000526044 RPL37AP61513 92 aaKnown RBP2.68□□□□□ -1.98
USP48-211ENST00000526044 Q5XG85 94 aa2.68□□□□□ -1.98
USP48-211ENST00000526044 Q6Q795 121 aa2.68□□□□□ -1.98
USP48-211ENST00000526044 SMIM11BQ8TCY0 68 aa2.68□□□□□ -1.98
USP48-211ENST00000526044 TRBV7-6A0A0J9YX20 115 aa2.67□□□□□ -1.98
USP48-211ENST00000526044 H0YGX0 51 aa2.67□□□□□ -1.98
USP48-211ENST00000526044 K7ERJ3 54 aa2.67□□□□□ -1.98
USP48-211ENST00000526044 K7ERU9 68 aa2.67□□□□□ -1.98
USP48-211ENST00000526044 SNCGO76070 127 aa2.67□□□□□ -1.98
USP48-211ENST00000526044 IGLV7-43P04211 117 aa2.67□□□□□ -1.98
USP48-211ENST00000526044 COX7BP24311 80 aa2.67□□□□□ -1.98
USP48-211ENST00000526044 LYRM7Q5U5X0 104 aa2.67□□□□□ -1.98
USP48-211ENST00000526044 DIRC1Q969H9 104 aa2.67□□□□□ -1.98
USP48-211ENST00000526044 SNHG12Q9BXW3 62 aa2.67□□□□□ -1.98
USP48-211ENST00000526044 C8orf17Q9NRJ1 99 aa2.67□□□□□ -1.98
USP48-211ENST00000526044 ZNF861PO60384 105 aa2.66□□□□□ -1.98
USP48-211ENST00000526044 COX6CP09669 75 aa2.66□□□□□ -1.98
USP48-211ENST00000526044 OCIAD2Q56VL3 154 aa2.66□□□□□ -1.98
USP48-211ENST00000526044 COL5A1-AS1Q5SY13 56 aa2.66□□□□□ -1.98
USP48-211ENST00000526044 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
USP48-211ENST00000526044 SMCR5Q8TEV8 140 aa2.66□□□□□ -1.98
USP48-211ENST00000526044 RYR1P21817 5038 aa2.65□□□□□ -1.98
USP48-211ENST00000526044 SLC25A20O43772 301 aa2.65□□□□□ -1.99
USP48-211ENST00000526044 ELOF1P60002 83 aaKnown RBP2.65□□□□□ -1.99
USP48-211ENST00000526044 PRLHP81277 87 aa2.65□□□□□ -1.99
USP48-211ENST00000526044 Q5VSD8 79 aa2.65□□□□□ -1.99
USP48-211ENST00000526044 SPINK6Q6UWN8 80 aa2.65□□□□□ -1.99
USP48-211ENST00000526044 Q6ZRX8 168 aa2.65□□□□□ -1.99
USP48-211ENST00000526044 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
USP48-211ENST00000526044 NAA38Q9BRA0 125 aaKnown RBP2.65□□□□□ -1.99
USP48-211ENST00000526044 HIGD2AQ9BW72 106 aa2.65□□□□□ -1.99
USP48-211ENST00000526044 BIRC6Q9NR09 4857 aa2.64□□□□□ -1.99
USP48-211ENST00000526044 HSPG2P98160 4391 aa2.64□□□□□ -1.99
USP48-211ENST00000526044 KIAA1109Q2LD37 5005 aa2.64□□□□□ -1.99
USP48-211ENST00000526044 A0A1B0GVX0 72 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms