RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 A4D1N5 150 aa8.26□□□□□ -1.09
PVT1-220ENST00000524165 LITAFQ99732 161 aa8.26□□□□□ -1.09
PVT1-220ENST00000524165 TRAV13-2A0A0B4J235 113 aa8.23□□□□□ -1.09
PVT1-220ENST00000524165 TIMM17BO60830 172 aa8.22□□□□□ -1.09
PVT1-220ENST00000524165 DPM2O94777 84 aa8.21□□□□□ -1.1
PVT1-220ENST00000524165 DSCR10P59022 87 aa8.21□□□□□ -1.1
PVT1-220ENST00000524165 OCIAD2Q56VL3 154 aa8.2□□□□□ -1.1
PVT1-220ENST00000524165 SS18L2Q9UHA2 77 aa8.2□□□□□ -1.1
PVT1-220ENST00000524165 IGKCP01834 107 aa8.17□□□□□ -1.1
PVT1-220ENST00000524165 SLC7A5P1Q8MH63 180 aa8.17□□□□□ -1.1
PVT1-220ENST00000524165 E9PLD3 99 aa8.16□□□□□ -1.1
PVT1-220ENST00000524165 TMEM218A2RU14 115 aa8.15□□□□□ -1.1
PVT1-220ENST00000524165 HSBP1O75506 76 aa8.15□□□□□ -1.1
PVT1-220ENST00000524165 PMCHL2Q9BQD1 86 aa8.14□□□□□ -1.11
PVT1-220ENST00000524165 SERF1AO75920 110 aa8.13□□□□□ -1.11
PVT1-220ENST00000524165 A6NDN8 102 aa8.12□□□□□ -1.11
PVT1-220ENST00000524165 LEPROTL1O95214 131 aa8.12□□□□□ -1.11
PVT1-220ENST00000524165 GHRHP01286 108 aa8.12□□□□□ -1.11
PVT1-220ENST00000524165 LINC00313P59037 77 aa8.12□□□□□ -1.11
PVT1-220ENST00000524165 ANKRD39Q53RE8 183 aa8.12□□□□□ -1.11
PVT1-220ENST00000524165 KRTAP2-2Q9BYT5 123 aa8.12□□□□□ -1.11
PVT1-220ENST00000524165 KRTAP2-1Q9BYU5 128 aa8.12□□□□□ -1.11
PVT1-220ENST00000524165 UQCC3Q6UW78 93 aa8.1□□□□□ -1.11
PVT1-220ENST00000524165 Q6ZQY7 126 aa8.09□□□□□ -1.11
PVT1-220ENST00000524165 COLCA2A8K830 154 aa8.07□□□□□ -1.12
PVT1-220ENST00000524165 SCGB1D1O95968 90 aa8.06□□□□□ -1.12
PVT1-220ENST00000524165 LINC00575Q6W349 94 aa8.06□□□□□ -1.12
PVT1-220ENST00000524165 SMIM11BQ8TCY0 68 aa8.06□□□□□ -1.12
PVT1-220ENST00000524165 HSPB8Q9UJY1 196 aa8.04□□□□□ -1.12
PVT1-220ENST00000524165 hADV29S1A0JD25 119 aa8.03□□□□□ -1.12
PVT1-220ENST00000524165 H3BUT2 72 aa8.03□□□□□ -1.12
PVT1-220ENST00000524165 KRTAP10-5P60370 271 aa8.03□□□□□ -1.12
PVT1-220ENST00000524165 PPDPFLQ8WWR9 84 aa8.03□□□□□ -1.12
PVT1-220ENST00000524165 COPS9Q8WXC6 57 aa8.03□□□□□ -1.12
PVT1-220ENST00000524165 SIGMAR1Q99720 223 aa8.03□□□□□ -1.12
PVT1-220ENST00000524165 MT1BP07438 61 aa8.02□□□□□ -1.13
PVT1-220ENST00000524165 SPINK7P58062 85 aa8.02□□□□□ -1.13
PVT1-220ENST00000524165 VAMP3Q15836 100 aa8.02□□□□□ -1.13
PVT1-220ENST00000524165 TEN1Q86WV5 123 aa8.02□□□□□ -1.13
PVT1-220ENST00000524165 SNHG12Q9BXW3 62 aa8.01□□□□□ -1.13
PVT1-220ENST00000524165 A0A087WSZ3 146 aa8□□□□□ -1.13
PVT1-220ENST00000524165 CLLU1Q5K131 121 aa8□□□□□ -1.13
PVT1-220ENST00000524165 SPRR2EP22531 72 aa7.99□□□□□ -1.13
PVT1-220ENST00000524165 SPRR2BP35325 72 aa7.99□□□□□ -1.13
PVT1-220ENST00000524165 SPRR2AP35326 72 aa7.99□□□□□ -1.13
PVT1-220ENST00000524165 FAM218AQ96MZ4 157 aa7.99□□□□□ -1.13
PVT1-220ENST00000524165 IFITM1P13164 125 aa7.98□□□□□ -1.13
PVT1-220ENST00000524165 FABP4P15090 132 aa7.98□□□□□ -1.13
PVT1-220ENST00000524165 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.97□□□□□ -1.13
PVT1-220ENST00000524165 A0A1W2PNM2 257 aa7.96□□□□□ -1.14
PVT1-220ENST00000524165 Q5VV11 94 aa7.96□□□□□ -1.14
PVT1-220ENST00000524165 LINC00310P59036 64 aa7.95□□□□□ -1.14
PVT1-220ENST00000524165 TTTY13Q9BZ97 58 aa7.95□□□□□ -1.14
PVT1-220ENST00000524165 WFDC13Q8IUB5 93 aa7.94□□□□□ -1.14
PVT1-220ENST00000524165 GPR98Q8WXG9 6306 aa7.93□□□□□ -1.14
PVT1-220ENST00000524165 IGKV4-1P06312 121 aa7.92□□□□□ -1.14
PVT1-220ENST00000524165 ZCCHC13Q8WW36 166 aaKnown RBP7.92□□□□□ -1.14
PVT1-220ENST00000524165 MUSTN1Q8IVN3 82 aa7.91□□□□□ -1.14
PVT1-220ENST00000524165 SCGB1D4Q6XE38 83 aa7.9□□□□□ -1.14
PVT1-220ENST00000524165 SPRR2FQ96RM1 72 aa7.9□□□□□ -1.14
PVT1-220ENST00000524165 KRTAP19-8Q3LI54 63 aa7.88□□□□□ -1.15
PVT1-220ENST00000524165 YPEL4Q96NS1 127 aa7.85□□□□□ -1.15
PVT1-220ENST00000524165 IGHV6-1A0A0B4J1U7 121 aa7.84□□□□□ -1.15
PVT1-220ENST00000524165 H1FX-AS1Q4G0G2 97 aa7.84□□□□□ -1.15
PVT1-220ENST00000524165 SYS1-DBNDD2H3BUS1 97 aa7.82□□□□□ -1.16
PVT1-220ENST00000524165 C3orf79P0CE67 100 aa7.81□□□□□ -1.16
PVT1-220ENST00000524165 NDUFV3P56181 108 aaKnown RBP7.8□□□□□ -1.16
PVT1-220ENST00000524165 LCE1AQ5T7P2 110 aa7.79□□□□□ -1.16
PVT1-220ENST00000524165 LINC01545Q5VT33 79 aa7.79□□□□□ -1.16
PVT1-220ENST00000524165 C12orf57Q99622 126 aa7.79□□□□□ -1.16
PVT1-220ENST00000524165 SPRR2GQ9BYE4 73 aa7.79□□□□□ -1.16
PVT1-220ENST00000524165 C8orf87E5RJ46 101 aa7.78□□□□□ -1.16
PVT1-220ENST00000524165 TRGC2P03986 189 aa7.77□□□□□ -1.17
PVT1-220ENST00000524165 DEFB116Q30KQ4 102 aa7.76□□□□□ -1.17
PVT1-220ENST00000524165 BVES-AS1Q5T3Y7 98 aa7.76□□□□□ -1.17
PVT1-220ENST00000524165 SNAPINO95295 136 aa7.75□□□□□ -1.17
PVT1-220ENST00000524165 LINC00472Q9H8W2 130 aa7.75□□□□□ -1.17
PVT1-220ENST00000524165 SPRR2DP22532 72 aa7.74□□□□□ -1.17
PVT1-220ENST00000524165 RAB37Q96AX2 223 aa7.74□□□□□ -1.17
PVT1-220ENST00000524165 H3BMG7 143 aa7.73□□□□□ -1.17
PVT1-220ENST00000524165 APOC3P02656 99 aa7.73□□□□□ -1.17
PVT1-220ENST00000524165 FAM236AA0A1B0GUQ0 79 aa7.71□□□□□ -1.18
PVT1-220ENST00000524165 FAM236BA0A1B0GV22 79 aa7.71□□□□□ -1.18
PVT1-220ENST00000524165 A0A1B0GVX0 72 aa7.71□□□□□ -1.18
PVT1-220ENST00000524165 PET117Q6UWS5 81 aa7.71□□□□□ -1.18
PVT1-220ENST00000524165 SVBPQ8N300 66 aa7.7□□□□□ -1.18
PVT1-220ENST00000524165 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
PVT1-220ENST00000524165 IMUPQ9GZP8 106 aa7.68□□□□□ -1.18
PVT1-220ENST00000524165 SNCGO76070 127 aa7.65□□□□□ -1.18
PVT1-220ENST00000524165 NDUFA5Q16718 116 aa7.64□□□□□ -1.19
PVT1-220ENST00000524165 DSCR8Q96T75 97 aa7.63□□□□□ -1.19
PVT1-220ENST00000524165 LCE3BQ5TA77 95 aa7.61□□□□□ -1.19
PVT1-220ENST00000524165 LYRM7Q5U5X0 104 aa7.61□□□□□ -1.19
PVT1-220ENST00000524165 KRTAP8-1Q8IUC2 63 aa7.59□□□□□ -1.19
PVT1-220ENST00000524165 ANKRD29Q8N6D5 301 aa7.59□□□□□ -1.19
PVT1-220ENST00000524165 IGKV3D-7A0A0C4DH55 119 aa7.58□□□□□ -1.2
PVT1-220ENST00000524165 FABP2P12104 132 aa7.58□□□□□ -1.2
PVT1-220ENST00000524165 SMCPP49901 116 aaPredicted RBP7.56□□□□□ -1.2
PVT1-220ENST00000524165 H0YGX0 51 aa7.54□□□□□ -1.2
PVT1-220ENST00000524165 TRACP01848 142 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms