RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 UTP20O75691 2785 aaKnown RBP3.89□□□□□ -1.79
SDC2-208ENST00000523877 A0A096LNT2 108 aa3.89□□□□□ -1.79
SDC2-208ENST00000523877 ACYP2P14621 99 aa3.89□□□□□ -1.79
SDC2-208ENST00000523877 C5orf56Q8N8D9 126 aa3.89□□□□□ -1.79
SDC2-208ENST00000523877 USF3Q68DE3 2245 aa3.89□□□□□ -1.79
SDC2-208ENST00000523877 CELSR2Q9HCU4 2923 aa3.88□□□□□ -1.79
SDC2-208ENST00000523877 SPG11Q96JI7 2443 aa3.88□□□□□ -1.79
SDC2-208ENST00000523877 A0A1W2PNN7 141 aa3.88□□□□□ -1.79
SDC2-208ENST00000523877 M0QY20 66 aa3.88□□□□□ -1.79
SDC2-208ENST00000523877 WT1-ASQ06250 92 aa3.88□□□□□ -1.79
SDC2-208ENST00000523877 RPL39P5Q59GN2 51 aa3.88□□□□□ -1.79
SDC2-208ENST00000523877 CCL19Q99731 98 aa3.88□□□□□ -1.79
SDC2-208ENST00000523877 HIVEP1P15822 2718 aa3.88□□□□□ -1.79
SDC2-208ENST00000523877 CSMD2Q7Z408 3487 aa3.88□□□□□ -1.79
SDC2-208ENST00000523877 COL27A1Q8IZC6 1860 aaPredicted RBP3.88□□□□□ -1.79
SDC2-208ENST00000523877 CADP27708 2225 aa3.87□□□□□ -1.79
SDC2-208ENST00000523877 MED13LQ71F56 2210 aa3.87□□□□□ -1.79
SDC2-208ENST00000523877 SPTBN1Q01082 2364 aaKnown RBP3.87□□□□□ -1.79
SDC2-208ENST00000523877 ANGP03950 147 aaKnown RBP3.87□□□□□ -1.79
SDC2-208ENST00000523877 DEFB134Q4QY38 66 aa3.87□□□□□ -1.79
SDC2-208ENST00000523877 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
SDC2-208ENST00000523877 MTORP42345 2549 aa3.87□□□□□ -1.79
SDC2-208ENST00000523877 PSORS1C2Q9UIG4 136 aa3.86□□□□□ -1.79
SDC2-208ENST00000523877 CENPEQ02224 2701 aa3.86□□□□□ -1.79
SDC2-208ENST00000523877 FBN1P35555 2871 aaKnown RBP3.85□□□□□ -1.79
SDC2-208ENST00000523877 A0A1W2PPR1 153 aa3.85□□□□□ -1.79
SDC2-208ENST00000523877 TP53AIP1Q9HCN2 124 aa3.85□□□□□ -1.79
SDC2-208ENST00000523877 AKAP9Q99996 3911 aa3.85□□□□□ -1.79
SDC2-208ENST00000523877 CRYBG3Q68DQ2 2970 aa3.84□□□□□ -1.79
SDC2-208ENST00000523877 A0A0G2JQZ4 141 aa3.84□□□□□ -1.79
SDC2-208ENST00000523877 SPTY2D1-AS1A0A0U1RR47 76 aa3.84□□□□□ -1.79
SDC2-208ENST00000523877 FAM168BA1KXE4 195 aa3.84□□□□□ -1.79
SDC2-208ENST00000523877 DEFB108AA8MXU0 73 aa3.84□□□□□ -1.79
SDC2-208ENST00000523877 STATHP02808 62 aa3.84□□□□□ -1.79
SDC2-208ENST00000523877 ANAPC11Q9NYG5 84 aa3.84□□□□□ -1.79
SDC2-208ENST00000523877 ICE1Q9Y2F5 2266 aa3.83□□□□□ -1.8
SDC2-208ENST00000523877 HIVEP3Q5T1R4 2406 aa3.83□□□□□ -1.8
SDC2-208ENST00000523877 ANKHD1Q8IWZ3 2542 aaKnown RBP3.83□□□□□ -1.8
SDC2-208ENST00000523877 DSCR10P59022 87 aa3.83□□□□□ -1.8
SDC2-208ENST00000523877 SSBP3-AS1Q7Z2R9 100 aa3.83□□□□□ -1.8
SDC2-208ENST00000523877 LINC00304Q8N9R0 145 aa3.83□□□□□ -1.8
SDC2-208ENST00000523877 I3L2K1 104 aa3.82□□□□□ -1.8
SDC2-208ENST00000523877 K7EQZ3 153 aa3.82□□□□□ -1.8
SDC2-208ENST00000523877 KRTAP11-1Q8IUC1 163 aa3.82□□□□□ -1.8
SDC2-208ENST00000523877 APCP25054 2843 aa3.82□□□□□ -1.8
SDC2-208ENST00000523877 RP1P56715 2156 aa3.82□□□□□ -1.8
SDC2-208ENST00000523877 KRTAP29-1A8MX34 341 aaPredicted RBP3.81□□□□□ -1.8
SDC2-208ENST00000523877 LY6G6CO95867 125 aa3.81□□□□□ -1.8
SDC2-208ENST00000523877 NIPBLQ6KC79 2804 aaeCLIP3.8□□□□□ -1.8
SDC2-208ENST00000523877 IGLV6-57P01721 117 aa3.8□□□□□ -1.8
SDC2-208ENST00000523877 SORL1Q92673 2214 aa3.8□□□□□ -1.8
SDC2-208ENST00000523877 IGLV5-48A0A075B6I7 105 aa3.79□□□□□ -1.8
SDC2-208ENST00000523877 COX6A2Q02221 97 aa3.79□□□□□ -1.8
SDC2-208ENST00000523877 NBEAL1Q6ZS30 2694 aa3.78□□□□□ -1.8
SDC2-208ENST00000523877 TYMSOSQ8TAI1 123 aa3.78□□□□□ -1.8
SDC2-208ENST00000523877 A0A1B0GUV1 79 aa3.77□□□□□ -1.81
SDC2-208ENST00000523877 LYNX1G3V0Z9 82 aa3.77□□□□□ -1.81
SDC2-208ENST00000523877 K7EIM0 57 aa3.77□□□□□ -1.81
SDC2-208ENST00000523877 MINOS1Q5TGZ0 78 aa3.77□□□□□ -1.81
SDC2-208ENST00000523877 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.77□□□□□ -1.81
SDC2-208ENST00000523877 WFDC13Q8IUB5 93 aa3.77□□□□□ -1.81
SDC2-208ENST00000523877 ATRQ13535 2644 aa3.77□□□□□ -1.81
SDC2-208ENST00000523877 STAB1Q9NY15 2570 aa3.77□□□□□ -1.81
SDC2-208ENST00000523877 FN1P02751 2386 aaKnown RBP3.76□□□□□ -1.81
SDC2-208ENST00000523877 DEFB119Q8N690 84 aa3.76□□□□□ -1.81
SDC2-208ENST00000523877 C6orf48Q9UBA6 75 aa3.76□□□□□ -1.81
SDC2-208ENST00000523877 R4GN34 69 aa3.76□□□□□ -1.81
SDC2-208ENST00000523877 H0YGG7 62 aa3.75□□□□□ -1.81
SDC2-208ENST00000523877 LY6EQ16553 131 aa3.75□□□□□ -1.81
SDC2-208ENST00000523877 PCOTHQ58A44 107 aa3.75□□□□□ -1.81
SDC2-208ENST00000523877 C10orf55Q5SWW7 151 aa3.75□□□□□ -1.81
SDC2-208ENST00000523877 WFDC10BQ8IUB3 73 aa3.75□□□□□ -1.81
SDC2-208ENST00000523877 COX14Q96I36 57 aa3.74□□□□□ -1.81
SDC2-208ENST00000523877 TOMM7Q9P0U1 55 aa3.74□□□□□ -1.81
SDC2-208ENST00000523877 CCL26Q9Y258 94 aa3.74□□□□□ -1.81
SDC2-208ENST00000523877 NBASA2RRP1 2371 aa3.73□□□□□ -1.81
SDC2-208ENST00000523877 PRR9Q5T870 116 aa3.73□□□□□ -1.81
SDC2-208ENST00000523877 IGKV2-24A0A0C4DH68 120 aa3.72□□□□□ -1.81
SDC2-208ENST00000523877 CCDC168Q8NDH2 2452 aa3.72□□□□□ -1.81
SDC2-208ENST00000523877 JMJD1CQ15652 2540 aa3.71□□□□□ -1.82
SDC2-208ENST00000523877 DEFB104AQ8WTQ1 72 aa3.71□□□□□ -1.82
SDC2-208ENST00000523877 RTTNQ86VV8 2226 aa3.71□□□□□ -1.82
SDC2-208ENST00000523877 CNTRLQ7Z7A1 2325 aa3.7□□□□□ -1.82
SDC2-208ENST00000523877 KNL1Q8NG31 2342 aa3.7□□□□□ -1.82
SDC2-208ENST00000523877 ZNF469Q96JG9 3925 aaPredicted RBP3.69□□□□□ -1.82
SDC2-208ENST00000523877 CUBNO60494 3623 aa3.69□□□□□ -1.82
SDC2-208ENST00000523877 CSPG4Q6UVK1 2322 aa3.69□□□□□ -1.82
SDC2-208ENST00000523877 COL6A5A8TX70 2615 aa3.68□□□□□ -1.82
SDC2-208ENST00000523877 TPRXLQ17RH7 258 aa3.68□□□□□ -1.82
SDC2-208ENST00000523877 Q6ZRX8 168 aa3.68□□□□□ -1.82
SDC2-208ENST00000523877 NSD1Q96L73 2696 aaPredicted RBP3.68□□□□□ -1.82
SDC2-208ENST00000523877 TACC2O95359 2948 aa3.68□□□□□ -1.82
SDC2-208ENST00000523877 G3V318 75 aa3.67□□□□□ -1.82
SDC2-208ENST00000523877 SPACA4Q8TDM5 124 aa3.67□□□□□ -1.82
SDC2-208ENST00000523877 U3KQA8 63 aa3.66□□□□□ -1.82
SDC2-208ENST00000523877 ANK2Q01484 3957 aa3.66□□□□□ -1.82
SDC2-208ENST00000523877 PLCE1Q9P212 2302 aa3.66□□□□□ -1.82
SDC2-208ENST00000523877 DCHS2Q6V1P9 2916 aa3.66□□□□□ -1.82
SDC2-208ENST00000523877 MEGF8Q7Z7M0 2845 aa3.66□□□□□ -1.82
SDC2-208ENST00000523877 RP1L1Q8IWN7 2480 aaPredicted RBP3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms