RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 DHRS4-AS1Q9P1J3 65 aa2.8□□□□□ -1.96
PCM1-215ENST00000522275 NBPF19A0A087WUL8 3843 aa2.8□□□□□ -1.96
PCM1-215ENST00000522275 A0A087WTM6 91 aa2.8□□□□□ -1.96
PCM1-215ENST00000522275 MMP24-AS1A0A0U1RRL7 71 aa2.8□□□□□ -1.96
PCM1-215ENST00000522275 ANGP03950 147 aaKnown RBP2.8□□□□□ -1.96
PCM1-215ENST00000522275 KRTAP15-1Q3LI76 137 aa2.8□□□□□ -1.96
PCM1-215ENST00000522275 IGFL1Q6UW32 110 aa2.8□□□□□ -1.96
PCM1-215ENST00000522275 IGLV8-61A0A075B6I0 122 aa2.79□□□□□ -1.96
PCM1-215ENST00000522275 A0A1W2PNU3 283 aaPredicted RBP2.79□□□□□ -1.96
PCM1-215ENST00000522275 IGLV7-43P04211 117 aa2.79□□□□□ -1.96
PCM1-215ENST00000522275 EGFEM1PQ0D2K5 195 aa2.79□□□□□ -1.96
PCM1-215ENST00000522275 TMEM105Q8N8V8 129 aa2.79□□□□□ -1.96
PCM1-215ENST00000522275 Q6ZRX8 168 aa2.79□□□□□ -1.96
PCM1-215ENST00000522275 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.79□□□□□ -1.96
PCM1-215ENST00000522275 DEFB109BQ30KR1 87 aa2.78□□□□□ -1.96
PCM1-215ENST00000522275 SSBP3-AS1Q7Z2R9 100 aa2.78□□□□□ -1.96
PCM1-215ENST00000522275 SPTAN1Q13813 2472 aaKnown RBP2.78□□□□□ -1.96
PCM1-215ENST00000522275 ZFHX2Q9C0A1 2572 aaPredicted RBP2.78□□□□□ -1.96
PCM1-215ENST00000522275 PATE3B3GLJ2 98 aa2.78□□□□□ -1.97
PCM1-215ENST00000522275 CCL19Q99731 98 aa2.78□□□□□ -1.97
PCM1-215ENST00000522275 LY6EQ16553 131 aa2.77□□□□□ -1.97
PCM1-215ENST00000522275 TEX15Q9BXT5 2789 aa2.77□□□□□ -1.97
PCM1-215ENST00000522275 A0A096LPF7 62 aa2.76□□□□□ -1.97
PCM1-215ENST00000522275 NCOR2Q9Y618 2525 aa2.76□□□□□ -1.97
PCM1-215ENST00000522275 RPL37AP8A6NKH3 93 aa2.76□□□□□ -1.97
PCM1-215ENST00000522275 KRTAP4-16G5E9R7 235 aaPredicted RBP2.75□□□□□ -1.97
PCM1-215ENST00000522275 C10orf99Q6UWK7 81 aa2.75□□□□□ -1.97
PCM1-215ENST00000522275 Q96NJ1 140 aa2.75□□□□□ -1.97
PCM1-215ENST00000522275 UNC79Q9P2D8 2635 aa2.75□□□□□ -1.97
PCM1-215ENST00000522275 CSMD3Q7Z407 3707 aa2.75□□□□□ -1.97
PCM1-215ENST00000522275 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
PCM1-215ENST00000522275 F8P00451 2351 aa2.74□□□□□ -1.97
PCM1-215ENST00000522275 CSNK1G2-AS1Q8NCQ2 148 aa2.74□□□□□ -1.97
PCM1-215ENST00000522275 CIRBP-AS1Q8TBR5 109 aa2.74□□□□□ -1.97
PCM1-215ENST00000522275 C16orf74Q96GX8 76 aa2.74□□□□□ -1.97
PCM1-215ENST00000522275 NAV2Q8IVL1 2488 aa2.74□□□□□ -1.97
PCM1-215ENST00000522275 TLN1Q9Y490 2541 aaKnown RBP2.74□□□□□ -1.97
PCM1-215ENST00000522275 K7EIL1 84 aa2.73□□□□□ -1.97
PCM1-215ENST00000522275 H3BUX3 64 aa2.72□□□□□ -1.97
PCM1-215ENST00000522275 ZNF462Q96JM2 2506 aa2.72□□□□□ -1.97
PCM1-215ENST00000522275 DEFB130BP0DP73 79 aa2.72□□□□□ -1.97
PCM1-215ENST00000522275 DEFB130AP0DP74 79 aa2.72□□□□□ -1.97
PCM1-215ENST00000522275 SPRR1AP35321 89 aa2.72□□□□□ -1.97
PCM1-215ENST00000522275 CSPG4Q6UVK1 2322 aa2.71□□□□□ -1.97
PCM1-215ENST00000522275 SRRM2Q9UQ35 2752 aaKnown RBP2.71□□□□□ -1.98
PCM1-215ENST00000522275 H0YAA0 97 aa2.71□□□□□ -1.98
PCM1-215ENST00000522275 SLURP1P55000 103 aa2.71□□□□□ -1.98
PCM1-215ENST00000522275 Q6YL49 198 aa2.71□□□□□ -1.98
PCM1-215ENST00000522275 NBDYA0A0U1RRE5 68 aa2.71□□□□□ -1.98
PCM1-215ENST00000522275 FBN1P35555 2871 aaKnown RBP2.7□□□□□ -1.98
PCM1-215ENST00000522275 ATRXP46100 2492 aa2.7□□□□□ -1.98
PCM1-215ENST00000522275 PSORS1C2Q9UIG4 136 aa2.7□□□□□ -1.98
PCM1-215ENST00000522275 PTPN13Q12923 2485 aa2.7□□□□□ -1.98
PCM1-215ENST00000522275 KMT2BQ9UMN6 2715 aaPredicted RBP2.7□□□□□ -1.98
PCM1-215ENST00000522275 HRNRQ86YZ3 2850 aaPredicted RBP2.7□□□□□ -1.98
PCM1-215ENST00000522275 GIG44P09565 113 aaPredicted RBP2.69□□□□□ -1.98
PCM1-215ENST00000522275 Q6ZSA8 131 aa2.69□□□□□ -1.98
PCM1-215ENST00000522275 DEFB132Q7Z7B7 95 aa2.69□□□□□ -1.98
PCM1-215ENST00000522275 MRPL34Q9BQ48 92 aaKnown RBP2.69□□□□□ -1.98
PCM1-215ENST00000522275 PANO1I0J062 215 aa2.69□□□□□ -1.98
PCM1-215ENST00000522275 PRO0255Q9UI72 69 aa2.69□□□□□ -1.98
PCM1-215ENST00000522275 PKD1L2Q7Z442 2459 aa2.69□□□□□ -1.98
PCM1-215ENST00000522275 TPRXLQ17RH7 258 aa2.68□□□□□ -1.98
PCM1-215ENST00000522275 NBEAL2Q6ZNJ1 2754 aa2.68□□□□□ -1.98
PCM1-215ENST00000522275 SONP18583 2426 aaKnown RBP2.68□□□□□ -1.98
PCM1-215ENST00000522275 FN1P02751 2386 aaKnown RBP2.68□□□□□ -1.98
PCM1-215ENST00000522275 USP9XQ93008 2570 aaPredicted RBP2.68□□□□□ -1.98
PCM1-215ENST00000522275 LY6G6CO95867 125 aa2.68□□□□□ -1.98
PCM1-215ENST00000522275 JMJD1CQ15652 2540 aa2.68□□□□□ -1.98
PCM1-215ENST00000522275 ANKHD1Q8IWZ3 2542 aaKnown RBP2.68□□□□□ -1.98
PCM1-215ENST00000522275 TLN2Q9Y4G6 2542 aa2.68□□□□□ -1.98
PCM1-215ENST00000522275 VPS13CQ709C8 3753 aa2.68□□□□□ -1.98
PCM1-215ENST00000522275 TTC28Q96AY4 2481 aa2.67□□□□□ -1.98
PCM1-215ENST00000522275 UTP20O75691 2785 aaKnown RBP2.67□□□□□ -1.98
PCM1-215ENST00000522275 KRTAP13-3Q3SY46 172 aa2.67□□□□□ -1.98
PCM1-215ENST00000522275 A0A1B0GVX0 72 aa2.66□□□□□ -1.98
PCM1-215ENST00000522275 C15orf56Q8N910 161 aa2.66□□□□□ -1.98
PCM1-215ENST00000522275 ABCA2Q9BZC7 2435 aa2.66□□□□□ -1.98
PCM1-215ENST00000522275 VWFP04275 2813 aa2.65□□□□□ -1.98
PCM1-215ENST00000522275 MUC6Q6W4X9 2439 aa2.65□□□□□ -1.99
PCM1-215ENST00000522275 SETXQ7Z333 2677 aaKnown RBP2.65□□□□□ -1.99
PCM1-215ENST00000522275 A0A096LNI7 61 aa2.65□□□□□ -1.99
PCM1-215ENST00000522275 LELP1Q5T871 98 aa2.64□□□□□ -1.99
PCM1-215ENST00000522275 ZFYVE26Q68DK2 2539 aa2.64□□□□□ -1.99
PCM1-215ENST00000522275 CACNA1AO00555 2505 aa2.64□□□□□ -1.99
PCM1-215ENST00000522275 KRTAP7-1Q8IUC3 87 aa2.64□□□□□ -1.99
PCM1-215ENST00000522275 PRLHP81277 87 aa2.63□□□□□ -1.99
PCM1-215ENST00000522275 OTOGLQ3ZCN5 2332 aa2.63□□□□□ -1.99
PCM1-215ENST00000522275 A0A1B0GU33 70 aa2.63□□□□□ -1.99
PCM1-215ENST00000522275 C10orf95Q9H7T3 257 aa2.63□□□□□ -1.99
PCM1-215ENST00000522275 NIPBLQ6KC79 2804 aaeCLIP2.62□□□□□ -1.992e-6■□□□□ 9.2
PCM1-215ENST00000522275 BSNQ9UPA5 3926 aa2.62□□□□□ -1.99
PCM1-215ENST00000522275 GCN1Q92616 2671 aaKnown RBP2.62□□□□□ -1.99
PCM1-215ENST00000522275 SPINK1P00995 79 aa2.61□□□□□ -1.99
PCM1-215ENST00000522275 CCDC168Q8NDH2 2452 aa2.61□□□□□ -1.99
PCM1-215ENST00000522275 CAMK2N1Q7Z7J9 78 aa2.6□□□□□ -1.99
PCM1-215ENST00000522275 MTORP42345 2549 aa2.59□□□□□ -1.99
PCM1-215ENST00000522275 HIVEP3Q5T1R4 2406 aa2.59□□□□□ -1.99
PCM1-215ENST00000522275 SPRR1BP22528 89 aa2.59□□□□□ -1.99
PCM1-215ENST00000522275 HIVEP2P31629 2446 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms