RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 LINC00308Q8TCZ7 52 aa5.07□□□□□ -1.6
CTNNA1-234ENST00000522227 NMUP48645 174 aa5.06□□□□□ -1.6
CTNNA1-234ENST00000522227 S100PP25815 95 aa5.05□□□□□ -1.6
CTNNA1-234ENST00000522227 TRBV7-6A0A0J9YX20 115 aa5.04□□□□□ -1.6
CTNNA1-234ENST00000522227 HERVK_113P61574 105 aa5.04□□□□□ -1.6
CTNNA1-234ENST00000522227 Q5VV11 94 aa5.04□□□□□ -1.6
CTNNA1-234ENST00000522227 SPRR2DP22532 72 aa5.03□□□□□ -1.6
CTNNA1-234ENST00000522227 LINC00313P59037 77 aa5.03□□□□□ -1.6
CTNNA1-234ENST00000522227 ANKRD39Q53RE8 183 aa5.03□□□□□ -1.6
CTNNA1-234ENST00000522227 SIGMAR1Q99720 223 aa5.03□□□□□ -1.6
CTNNA1-234ENST00000522227 hCG_2014768A0A024R1R8 64 aa5.02□□□□□ -1.61
CTNNA1-234ENST00000522227 TRAV13-2A0A0B4J235 113 aa5.02□□□□□ -1.61
CTNNA1-234ENST00000522227 A0A1W2PNM2 257 aa5.02□□□□□ -1.61
CTNNA1-234ENST00000522227 COLCA2A8K830 154 aa5.02□□□□□ -1.61
CTNNA1-234ENST00000522227 OCIAD2Q56VL3 154 aa5.02□□□□□ -1.61
CTNNA1-234ENST00000522227 PMCHL2Q9BQD1 86 aa5.02□□□□□ -1.61
CTNNA1-234ENST00000522227 H3BUT2 72 aa5.01□□□□□ -1.61
CTNNA1-234ENST00000522227 SERF1AO75920 110 aa5.01□□□□□ -1.61
CTNNA1-234ENST00000522227 COX19Q49B96 90 aa5.01□□□□□ -1.61
CTNNA1-234ENST00000522227 A6NDN8 102 aa5□□□□□ -1.61
CTNNA1-234ENST00000522227 SPINK7P58062 85 aa5□□□□□ -1.61
CTNNA1-234ENST00000522227 LITAFQ99732 161 aa5□□□□□ -1.61
CTNNA1-234ENST00000522227 NHP2Q9NX24 153 aaKnown RBP5□□□□□ -1.61
CTNNA1-234ENST00000522227 SS18L2Q9UHA2 77 aa5□□□□□ -1.61
CTNNA1-234ENST00000522227 TRAPPC1Q9Y5R8 145 aa5□□□□□ -1.61
CTNNA1-234ENST00000522227 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
CTNNA1-234ENST00000522227 Q6ZQY7 126 aa4.98□□□□□ -1.61
CTNNA1-234ENST00000522227 WFDC13Q8IUB5 93 aa4.98□□□□□ -1.61
CTNNA1-234ENST00000522227 ZNF815PA8K554 130 aa4.97□□□□□ -1.61
CTNNA1-234ENST00000522227 PLNP26678 52 aa4.97□□□□□ -1.61
CTNNA1-234ENST00000522227 A4D1N5 150 aa4.96□□□□□ -1.62
CTNNA1-234ENST00000522227 DPM2O94777 84 aa4.96□□□□□ -1.62
CTNNA1-234ENST00000522227 IMUPQ9GZP8 106 aa4.96□□□□□ -1.62
CTNNA1-234ENST00000522227 A0A087WSZ3 146 aa4.95□□□□□ -1.62
CTNNA1-234ENST00000522227 IGKCP01834 107 aa4.94□□□□□ -1.62
CTNNA1-234ENST00000522227 FAM218AQ96MZ4 157 aa4.94□□□□□ -1.62
CTNNA1-234ENST00000522227 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
CTNNA1-234ENST00000522227 SMIM11BQ8TCY0 68 aa4.93□□□□□ -1.62
CTNNA1-234ENST00000522227 CHCHD1Q96BP2 118 aaKnown RBP4.93□□□□□ -1.62
CTNNA1-234ENST00000522227 SNHG12Q9BXW3 62 aa4.93□□□□□ -1.62
CTNNA1-234ENST00000522227 FAM236AA0A1B0GUQ0 79 aa4.92□□□□□ -1.62
CTNNA1-234ENST00000522227 FAM236BA0A1B0GV22 79 aa4.92□□□□□ -1.62
CTNNA1-234ENST00000522227 KRTAP19-8Q3LI54 63 aa4.92□□□□□ -1.62
CTNNA1-234ENST00000522227 TIMM17BO60830 172 aa4.91□□□□□ -1.62
CTNNA1-234ENST00000522227 HSBP1O75506 76 aa4.91□□□□□ -1.62
CTNNA1-234ENST00000522227 IGKV4-1P06312 121 aa4.91□□□□□ -1.62
CTNNA1-234ENST00000522227 hADV29S1A0JD25 119 aa4.9□□□□□ -1.63
CTNNA1-234ENST00000522227 E9PLD3 99 aa4.9□□□□□ -1.63
CTNNA1-234ENST00000522227 LINC00575Q6W349 94 aa4.9□□□□□ -1.63
CTNNA1-234ENST00000522227 ZCCHC13Q8WW36 166 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-234ENST00000522227 TTTY13Q9BZ97 58 aa4.9□□□□□ -1.63
CTNNA1-234ENST00000522227 HSPB8Q9UJY1 196 aa4.9□□□□□ -1.63
CTNNA1-234ENST00000522227 IGHV6-1A0A0B4J1U7 121 aa4.89□□□□□ -1.63
CTNNA1-234ENST00000522227 LEPROTL1O95214 131 aa4.89□□□□□ -1.63
CTNNA1-234ENST00000522227 DEFB116Q30KQ4 102 aa4.89□□□□□ -1.63
CTNNA1-234ENST00000522227 FABP4P15090 132 aa4.88□□□□□ -1.63
CTNNA1-234ENST00000522227 TEN1Q86WV5 123 aa4.88□□□□□ -1.63
CTNNA1-234ENST00000522227 VAMP3Q15836 100 aa4.87□□□□□ -1.63
CTNNA1-234ENST00000522227 H1FX-AS1Q4G0G2 97 aa4.87□□□□□ -1.63
CTNNA1-234ENST00000522227 KRTAP8-1Q8IUC2 63 aa4.87□□□□□ -1.63
CTNNA1-234ENST00000522227 SCGB1D1O95968 90 aa4.86□□□□□ -1.63
CTNNA1-234ENST00000522227 TMEM218A2RU14 115 aa4.83□□□□□ -1.64
CTNNA1-234ENST00000522227 SPRR2GQ9BYE4 73 aa4.83□□□□□ -1.64
CTNNA1-234ENST00000522227 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-234ENST00000522227 MUSTN1Q8IVN3 82 aa4.82□□□□□ -1.64
CTNNA1-234ENST00000522227 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
CTNNA1-234ENST00000522227 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-234ENST00000522227 SCGB1D4Q6XE38 83 aa4.8□□□□□ -1.64
CTNNA1-234ENST00000522227 LYRM7Q5U5X0 104 aa4.79□□□□□ -1.64
CTNNA1-234ENST00000522227 C5orf47Q569G3 176 aa4.78□□□□□ -1.64
CTNNA1-234ENST00000522227 PPDPFLQ8WWR9 84 aa4.78□□□□□ -1.64
CTNNA1-234ENST00000522227 COPS9Q8WXC6 57 aa4.78□□□□□ -1.64
CTNNA1-234ENST00000522227 IFITM1P13164 125 aa4.77□□□□□ -1.65
CTNNA1-234ENST00000522227 C3orf79P0CE67 100 aa4.76□□□□□ -1.65
CTNNA1-234ENST00000522227 NDUFV3P56181 108 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-234ENST00000522227 LINC00310P59036 64 aa4.76□□□□□ -1.65
CTNNA1-234ENST00000522227 C8orf87E5RJ46 101 aa4.74□□□□□ -1.65
CTNNA1-234ENST00000522227 H3BMG7 143 aa4.74□□□□□ -1.65
CTNNA1-234ENST00000522227 A0A1B0GVX0 72 aa4.73□□□□□ -1.65
CTNNA1-234ENST00000522227 UQCC3Q6UW78 93 aa4.73□□□□□ -1.65
CTNNA1-234ENST00000522227 C12orf57Q99622 126 aa4.73□□□□□ -1.65
CTNNA1-234ENST00000522227 SMCPP49901 116 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-234ENST00000522227 A0A1B0GV72 72 aa4.71□□□□□ -1.66
CTNNA1-234ENST00000522227 LINC00472Q9H8W2 130 aa4.71□□□□□ -1.66
CTNNA1-234ENST00000522227 TRGC2P03986 189 aa4.7□□□□□ -1.66
CTNNA1-234ENST00000522227 IGKV3D-7A0A0C4DH55 119 aa4.68□□□□□ -1.66
CTNNA1-234ENST00000522227 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
CTNNA1-234ENST00000522227 SYS1-DBNDD2H3BUS1 97 aa4.68□□□□□ -1.66
CTNNA1-234ENST00000522227 CLLU1Q5K131 121 aa4.68□□□□□ -1.66
CTNNA1-234ENST00000522227 RAB37Q96AX2 223 aa4.68□□□□□ -1.66
CTNNA1-234ENST00000522227 DSCR8Q96T75 97 aa4.68□□□□□ -1.66
CTNNA1-234ENST00000522227 KRTAP4-8Q9BYQ9 185 aa4.68□□□□□ -1.66
CTNNA1-234ENST00000522227 FABP2P12104 132 aa4.67□□□□□ -1.66
CTNNA1-234ENST00000522227 KLKP1Q107X0 134 aa4.65□□□□□ -1.67
CTNNA1-234ENST00000522227 BVES-AS1Q5T3Y7 98 aa4.65□□□□□ -1.67
CTNNA1-234ENST00000522227 TRBV7-4A0A0J9YYF1 115 aa4.64□□□□□ -1.67
CTNNA1-234ENST00000522227 ANKRD29Q8N6D5 301 aa4.64□□□□□ -1.67
CTNNA1-234ENST00000522227 LINC01545Q5VT33 79 aa4.63□□□□□ -1.67
CTNNA1-234ENST00000522227 YPEL4Q96NS1 127 aa4.62□□□□□ -1.67
CTNNA1-234ENST00000522227 IGKV2D-30A0A075B6S6 120 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms