RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 Q6ZQY7 126 aa13.61□□□□□ -0.23
VEGFA-220ENST00000519767 LCE2DQ5TA82 110 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-220ENST00000519767 S100A6P06703 90 aa13.59□□□□□ -0.23
VEGFA-220ENST00000519767 RPL37P61927 97 aaKnown RBP13.57□□□□□ -0.24
VEGFA-220ENST00000519767 OCIAD2Q56VL3 154 aa13.57□□□□□ -0.24
VEGFA-220ENST00000519767 BVES-AS1Q5T3Y7 98 aa13.56□□□□□ -0.24
VEGFA-220ENST00000519767 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-220ENST00000519767 PPDPFLQ8WWR9 84 aa13.55□□□□□ -0.24
VEGFA-220ENST00000519767 CLEC2BQ92478 149 aa13.54□□□□□ -0.24
VEGFA-220ENST00000519767 HIST1H4GQ99525 98 aa13.54□□□□□ -0.24
VEGFA-220ENST00000519767 TRBV7-7A0A0K0K1E9 115 aa13.52□□□□□ -0.25
VEGFA-220ENST00000519767 SCGB1D1O95968 90 aa13.52□□□□□ -0.25
VEGFA-220ENST00000519767 MT1HP80294 61 aa13.52□□□□□ -0.25
VEGFA-220ENST00000519767 IGFL1Q6UW32 110 aa13.51□□□□□ -0.25
VEGFA-220ENST00000519767 CFC1BP0CG36 223 aa13.5□□□□□ -0.25
VEGFA-220ENST00000519767 SNHG12Q9BXW3 62 aa13.5□□□□□ -0.25
VEGFA-220ENST00000519767 COX8AP10176 69 aa13.48□□□□□ -0.25
VEGFA-220ENST00000519767 C12orf57Q99622 126 aa13.48□□□□□ -0.25
VEGFA-220ENST00000519767 DLEU1O43261 78 aa13.47□□□□□ -0.25
VEGFA-220ENST00000519767 SNCGO76070 127 aa13.45□□□□□ -0.26
VEGFA-220ENST00000519767 H0YGX0 51 aa13.39□□□□□ -0.27
VEGFA-220ENST00000519767 CFC1P0CG37 223 aa13.39□□□□□ -0.27
VEGFA-220ENST00000519767 LST1O00453 97 aa13.38□□□□□ -0.27
VEGFA-220ENST00000519767 COX6B2Q6YFQ2 88 aa13.38□□□□□ -0.27
VEGFA-220ENST00000519767 RAB37Q96AX2 223 aa13.38□□□□□ -0.27
VEGFA-220ENST00000519767 HIGD1BQ9P298 99 aa13.36□□□□□ -0.27
VEGFA-220ENST00000519767 H3BUT2 72 aa13.35□□□□□ -0.27
VEGFA-220ENST00000519767 ATP11AUNQ6ZP68 121 aa13.35□□□□□ -0.27
VEGFA-220ENST00000519767 OBSCN-AS1Q96MR7 158 aa13.35□□□□□ -0.27
VEGFA-220ENST00000519767 C14orf144Q96I85 54 aa13.34□□□□□ -0.27
VEGFA-220ENST00000519767 FSIP2Q5CZC0 6907 aa13.33□□□□□ -0.28
VEGFA-220ENST00000519767 Q6Q795 121 aa13.33□□□□□ -0.28
VEGFA-220ENST00000519767 Q75L30 129 aa13.33□□□□□ -0.28
VEGFA-220ENST00000519767 SS18L2Q9UHA2 77 aa13.33□□□□□ -0.28
VEGFA-220ENST00000519767 A0A0B4J2C4 111 aa13.32□□□□□ -0.28
VEGFA-220ENST00000519767 M0R2T5 61 aa13.31□□□□□ -0.28
VEGFA-220ENST00000519767 GHRHP01286 108 aa13.3□□□□□ -0.28
VEGFA-220ENST00000519767 LORP23490 312 aaPredicted RBP13.3□□□□□ -0.28
VEGFA-220ENST00000519767 KRTAP10-6P60371 365 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-220ENST00000519767 TEN1Q86WV5 123 aa13.29□□□□□ -0.28
VEGFA-220ENST00000519767 CRCT1Q9UGL9 99 aa13.29□□□□□ -0.28
VEGFA-220ENST00000519767 NDUFV3P56181 108 aaKnown RBP13.28□□□□□ -0.28
VEGFA-220ENST00000519767 SPATA45Q537H7 98 aa13.28□□□□□ -0.28
VEGFA-220ENST00000519767 PAM16Q9Y3D7 125 aa13.27□□□□□ -0.29
VEGFA-220ENST00000519767 A0A1B0GX51 115 aa13.25□□□□□ -0.29
VEGFA-220ENST00000519767 FAM218AQ96MZ4 157 aa13.25□□□□□ -0.29
VEGFA-220ENST00000519767 Q96NJ1 140 aa13.24□□□□□ -0.29
VEGFA-220ENST00000519767 VAMP8Q9BV40 100 aa13.24□□□□□ -0.29
VEGFA-220ENST00000519767 C2orf91Q6ZV80 131 aa13.22□□□□□ -0.29
VEGFA-220ENST00000519767 CEND1Q8N111 149 aa13.22□□□□□ -0.29
VEGFA-220ENST00000519767 PRO1854Q9UHT4 67 aa13.22□□□□□ -0.29
VEGFA-220ENST00000519767 TMEM238LA0A1B0GVL6 79 aa13.21□□□□□ -0.29
VEGFA-220ENST00000519767 A6NJY4 79 aa13.21□□□□□ -0.29
VEGFA-220ENST00000519767 H3BMG7 143 aa13.21□□□□□ -0.29
VEGFA-220ENST00000519767 A0A087WSZ3 146 aa13.17□□□□□ -0.3
VEGFA-220ENST00000519767 FABP2P12104 132 aa13.17□□□□□ -0.3
VEGFA-220ENST00000519767 FLGP20930 4061 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-220ENST00000519767 C20orf166-AS1Q96NR2 134 aa13.15□□□□□ -0.3
VEGFA-220ENST00000519767 A8MUU9 505 aa13.12□□□□□ -0.31
VEGFA-220ENST00000519767 H3BQ85 93 aa13.1□□□□□ -0.31
VEGFA-220ENST00000519767 TRIAP1O43715 76 aa13.09□□□□□ -0.31
VEGFA-220ENST00000519767 FXYD2P54710 66 aa13.09□□□□□ -0.31
VEGFA-220ENST00000519767 A0A1W2PNM2 257 aa13.06□□□□□ -0.32
VEGFA-220ENST00000519767 DNAL4O96015 105 aa13.05□□□□□ -0.32
VEGFA-220ENST00000519767 ANKRD29Q8N6D5 301 aa13.05□□□□□ -0.32
VEGFA-220ENST00000519767 TMA7Q9Y2S6 64 aaKnown RBP13.05□□□□□ -0.32
VEGFA-220ENST00000519767 ORMDL1Q9P0S3 153 aa13.04□□□□□ -0.32
VEGFA-220ENST00000519767 TRBV7-4A0A0J9YYF1 115 aa13.03□□□□□ -0.32
VEGFA-220ENST00000519767 TRBV20-1A0A075B6N2 111 aa13.01□□□□□ -0.33
VEGFA-220ENST00000519767 DSCR10P59022 87 aa13.01□□□□□ -0.33
VEGFA-220ENST00000519767 TMEM256-PLSCR3K7ERE1 68 aa13□□□□□ -0.33
VEGFA-220ENST00000519767 COX6CP09669 75 aa13□□□□□ -0.33
VEGFA-220ENST00000519767 PSMB2P49721 201 aa13□□□□□ -0.33
VEGFA-220ENST00000519767 SIGMAR1Q99720 223 aa13□□□□□ -0.33
VEGFA-220ENST00000519767 LINC00313P59037 77 aa12.99□□□□□ -0.33
VEGFA-220ENST00000519767 HSD52Q0P140 79 aa12.99□□□□□ -0.33
VEGFA-220ENST00000519767 IGKV4-1P06312 121 aa12.96□□□□□ -0.33
VEGFA-220ENST00000519767 PYY3Q5JQD4 70 aa12.93□□□□□ -0.34
VEGFA-220ENST00000519767 K7ERJ3 54 aa12.91□□□□□ -0.34
VEGFA-220ENST00000519767 CCKP06307 115 aa12.9□□□□□ -0.34
VEGFA-220ENST00000519767 UBE2V1Q13404 147 aa12.89□□□□□ -0.35
VEGFA-220ENST00000519767 LINC00472Q9H8W2 130 aa12.89□□□□□ -0.35
VEGFA-220ENST00000519767 A0A1B0GV72 72 aa12.88□□□□□ -0.35
VEGFA-220ENST00000519767 TRACP01848 142 aa12.88□□□□□ -0.35
VEGFA-220ENST00000519767 KRTAP16-1A8MUX0 517 aa12.86□□□□□ -0.35
VEGFA-220ENST00000519767 DEFB116Q30KQ4 102 aa12.83□□□□□ -0.36
VEGFA-220ENST00000519767 UQCR10Q9UDW1 63 aa12.83□□□□□ -0.36
VEGFA-220ENST00000519767 NOTCH2NLQ7Z3S9 236 aa12.81□□□□□ -0.36
VEGFA-220ENST00000519767 IGHV6-1A0A0B4J1U7 121 aa12.8□□□□□ -0.36
VEGFA-220ENST00000519767 SCGB1C2P0DMR2 95 aa12.8□□□□□ -0.36
VEGFA-220ENST00000519767 RBM3P98179 157 aaKnown RBP12.79□□□□□ -0.36
VEGFA-220ENST00000519767 KRTAP9-8Q9BYQ0 159 aa12.78□□□□□ -0.36
VEGFA-220ENST00000519767 DSCR8Q96T75 97 aa12.76□□□□□ -0.37
VEGFA-220ENST00000519767 FAM236DA0A1B0GTK5 79 aa12.75□□□□□ -0.37
VEGFA-220ENST00000519767 FAM236CP0DP71 79 aa12.75□□□□□ -0.37
VEGFA-220ENST00000519767 C21orf62-AS1Q17RA5 79 aa12.75□□□□□ -0.37
VEGFA-220ENST00000519767 RBM12B-AS1Q9P1G2 102 aa12.75□□□□□ -0.37
VEGFA-220ENST00000519767 C8orf87E5RJ46 101 aa12.74□□□□□ -0.37
VEGFA-220ENST00000519767 VPS25Q9BRG1 176 aa12.74□□□□□ -0.37
VEGFA-220ENST00000519767 A0A1B0GVX0 72 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms