RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 FAM208AQ9UK61 1670 aaKnown RBP-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 ITPR2Q14571 2701 aa-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 KIF14Q15058 1648 aa-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 MAP3K4Q9Y6R4 1608 aa-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 EIF4G3O43432 1585 aaKnown RBP-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 ZFHX4Q86UP3 3567 aa-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 TEX14Q8IWB6 1497 aa-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 SCAPERQ9BY12 1400 aa-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 KTN1Q86UP2 1357 aaKnown RBP-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 TSPAN19P0C672 248 aa-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 ASIPP42127 132 aa-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 ATP5EP56381 51 aaPredicted RBP-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 KRTAP8-1Q8IUC2 63 aa-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 DPH3Q96FX2 82 aa-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 CENPHQ9H3R5 247 aa-0.78□□□□□ -2.53
RNU4-49P-201ENST00000516080 PRUNE2Q8WUY3 3088 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 ANKRD36BQ8N2N9 1353 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 FAM24AA6NFZ4 105 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 F8WEM9 126 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 LEPROTL1O95214 131 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 MT-ATP8P03928 68 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 UQCRHP07919 91 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 GNG10P50151 68 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 KRTDAPP60985 99 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 CKS1BP61024 79 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 RPS25P62851 125 aaKnown RBP-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 PMCHL1Q16048 86 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 KRTAP19-6Q3LI70 58 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 LSM10Q969L4 123 aaKnown RBP-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 CGREF1Q99674 301 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 LINC00474Q9P2X8 69 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 PRDM15P57071 1507 aaPredicted RBP-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 ARHGAP5Q13017 1502 aa-0.79□□□□□ -2.54
RNU4-49P-201ENST00000516080 ERVK-7P63135 1459 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 RAPGEF2Q9Y4G8 1499 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 BOD1L1Q8NFC6 3051 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 PLIN4Q96Q06 1357 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 D6R8Y8 96 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 IGLC2P0DOY2 106 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 IGLC3P0DOY3 106 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 DEFB130BP0DP73 79 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 DEFB130AP0DP74 79 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 ARPC4P59998 168 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 MUSTN1Q8IVN3 82 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 GAFA1Q96PS6 74 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 DDA1Q9BW61 102 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 NOP10Q9NPE3 64 aaKnown RBP-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 MYO3AQ8NEV4 1616 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 MAST1Q9Y2H9 1570 aa-0.8□□□□□ -2.54
RNU4-49P-201ENST00000516080 NHSQ6T4R5 1651 aa-0.81□□□□□ -2.54
RNU4-49P-201ENST00000516080 MROH1Q8NDA8 1641 aa-0.81□□□□□ -2.54
RNU4-49P-201ENST00000516080 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.81□□□□□ -2.54
RNU4-49P-201ENST00000516080 IGLV5-48A0A075B6I7 105 aa-0.81□□□□□ -2.54
RNU4-49P-201ENST00000516080 IQCF6A8MYZ5 107 aa-0.81□□□□□ -2.54
RNU4-49P-201ENST00000516080 FABP1P07148 127 aa-0.81□□□□□ -2.54
RNU4-49P-201ENST00000516080 ACYP1P07311 99 aa-0.81□□□□□ -2.54
RNU4-49P-201ENST00000516080 DR1Q01658 176 aa-0.81□□□□□ -2.54
RNU4-49P-201ENST00000516080 CCDC58Q4VC31 144 aa-0.81□□□□□ -2.54
RNU4-49P-201ENST00000516080 MEIG1Q5JSS6 88 aa-0.81□□□□□ -2.54
RNU4-49P-201ENST00000516080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.81□□□□□ -2.54
RNU4-49P-201ENST00000516080 MLH3Q9UHC1 1453 aa-0.81□□□□□ -2.54
RNU4-49P-201ENST00000516080 TRBV25-1A0A075B6N4 114 aa-0.82□□□□□ -2.54
RNU4-49P-201ENST00000516080 A0A1B0GUT8 65 aa-0.82□□□□□ -2.54
RNU4-49P-201ENST00000516080 SPART-AS1P0CW21 52 aa-0.82□□□□□ -2.54
RNU4-49P-201ENST00000516080 RPS29P62273 56 aaKnown RBP-0.82□□□□□ -2.54
RNU4-49P-201ENST00000516080 ETDBQ3ZM63 59 aa-0.82□□□□□ -2.54
RNU4-49P-201ENST00000516080 ALKAL2Q6UX46 152 aa-0.82□□□□□ -2.54
RNU4-49P-201ENST00000516080 ZNF720Q7Z2F6 126 aa-0.82□□□□□ -2.54
RNU4-49P-201ENST00000516080 SVBPQ8N300 66 aa-0.82□□□□□ -2.54
RNU4-49P-201ENST00000516080 CACFD1Q9UGQ2 172 aa-0.82□□□□□ -2.54
RNU4-49P-201ENST00000516080 MYO15AQ9UKN7 3530 aa-0.82□□□□□ -2.54
RNU4-49P-201ENST00000516080 PIK3C2BO00750 1634 aa-0.82□□□□□ -2.54
RNU4-49P-201ENST00000516080 PREX2Q70Z35 1606 aa-0.82□□□□□ -2.54
RNU4-49P-201ENST00000516080 MYOM2P54296 1465 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 GNG14A0A1W2PPG7 69 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 A8MTW9 85 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 OOSP1A8MZH6 123 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 LYNX1G3V0Z9 82 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 H3BUA1 57 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 NDUFC1O43677 76 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 SNAPC5O75971 98 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 CYB5AP00167 134 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 SARNPP82979 210 aaKnown RBP-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 WT1-ASQ06250 92 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 ACBD7Q8N6N7 88 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 DPH3P1Q9H4G8 78 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 PAIP2BQ9ULR5 123 aaKnown RBP-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 KIF21BO75037 1637 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 CCNB3Q8WWL7 1395 aa-0.83□□□□□ -2.54
RNU4-49P-201ENST00000516080 RNF17Q9BXT8 1623 aaKnown RBP-0.84□□□□□ -2.54
RNU4-49P-201ENST00000516080 M0QY20 66 aa-0.84□□□□□ -2.54
RNU4-49P-201ENST00000516080 PLGLAQ15195 96 aa-0.84□□□□□ -2.54
RNU4-49P-201ENST00000516080 HMGN3Q15651 99 aa-0.84□□□□□ -2.54
RNU4-49P-201ENST00000516080 BVES-AS1Q5T3Y7 98 aa-0.84□□□□□ -2.54
RNU4-49P-201ENST00000516080 SPEGQ15772 3267 aa-0.84□□□□□ -2.54
RNU4-49P-201ENST00000516080 DNMBPQ6XZF7 1577 aa-0.84□□□□□ -2.54
RNU4-49P-201ENST00000516080 DIP2BQ9P265 1576 aa-0.84□□□□□ -2.54
RNU4-49P-201ENST00000516080 ANKRD26Q9UPS8 1709 aa-0.84□□□□□ -2.54
RNU4-49P-201ENST00000516080 ROCK2O75116 1388 aaKnown RBP-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms