RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 hDV103S1A0JD37 113 aa4.77□□□□□ -1.65
CLIP1-205ENST00000514271 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.77□□□□□ -1.65
CLIP1-205ENST00000514271 SPRR4Q96PI1 79 aa4.77□□□□□ -1.65
CLIP1-205ENST00000514271 NKAPP1Q8N9T2 125 aa4.76□□□□□ -1.65
CLIP1-205ENST00000514271 C1orf134Q5TEV5 83 aa4.76□□□□□ -1.65
CLIP1-205ENST00000514271 PSPHP1O15172 72 aa4.76□□□□□ -1.65
CLIP1-205ENST00000514271 CDK2AP2O75956 126 aa4.76□□□□□ -1.65
CLIP1-205ENST00000514271 C14orf177Q52M58 125 aa4.76□□□□□ -1.65
CLIP1-205ENST00000514271 IGLV5-37A0A075B6J1 123 aa4.75□□□□□ -1.65
CLIP1-205ENST00000514271 C20orf197Q8N268 126 aa4.75□□□□□ -1.65
CLIP1-205ENST00000514271 PLAC8Q9NZF1 115 aa4.74□□□□□ -1.65
CLIP1-205ENST00000514271 C6orf48Q9UBA6 75 aa4.74□□□□□ -1.65
CLIP1-205ENST00000514271 LINC00158P58513 81 aa4.74□□□□□ -1.65
CLIP1-205ENST00000514271 UBE2BP63146 152 aa4.74□□□□□ -1.65
CLIP1-205ENST00000514271 LINC01554Q52M75 96 aa4.74□□□□□ -1.65
CLIP1-205ENST00000514271 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
CLIP1-205ENST00000514271 Q6ZRP5 223 aa4.74□□□□□ -1.65
CLIP1-205ENST00000514271 F8WEM9 126 aa4.73□□□□□ -1.65
CLIP1-205ENST00000514271 ASB16-AS1Q495Z4 193 aa4.73□□□□□ -1.65
CLIP1-205ENST00000514271 COX7BP24311 80 aa4.73□□□□□ -1.65
CLIP1-205ENST00000514271 C9orf116Q5BN46 136 aaPredicted RBP4.73□□□□□ -1.65
CLIP1-205ENST00000514271 TMEM254Q8TBM7 123 aa4.73□□□□□ -1.65
CLIP1-205ENST00000514271 UBL5Q9BZL1 73 aa4.72□□□□□ -1.65
CLIP1-205ENST00000514271 KCNQ1DNQ9H478 68 aa4.72□□□□□ -1.65
CLIP1-205ENST00000514271 IGLV9-49A0A0B4J1Y8 123 aa4.72□□□□□ -1.65
CLIP1-205ENST00000514271 C7orf65Q6ZTY9 151 aa4.72□□□□□ -1.65
CLIP1-205ENST00000514271 NREPQ16612 68 aa4.71□□□□□ -1.65
CLIP1-205ENST00000514271 DIRC1Q969H9 104 aa4.71□□□□□ -1.65
CLIP1-205ENST00000514271 COL7A1Q02388 2944 aa4.71□□□□□ -1.65
CLIP1-205ENST00000514271 TENM3Q9P273 2699 aa4.71□□□□□ -1.65
CLIP1-205ENST00000514271 FUSP35637 526 aaKnown RBP eCLIP4.71□□□□□ -1.66
CLIP1-205ENST00000514271 WFDC10BQ8IUB3 73 aa4.71□□□□□ -1.66
CLIP1-205ENST00000514271 KRTAP29-1A8MX34 341 aaPredicted RBP4.71□□□□□ -1.66
CLIP1-205ENST00000514271 C15orf56Q8N910 161 aa4.71□□□□□ -1.66
CLIP1-205ENST00000514271 IGLV8-61A0A075B6I0 122 aa4.7□□□□□ -1.66
CLIP1-205ENST00000514271 TLX1NBP0CAT3 122 aa4.7□□□□□ -1.66
CLIP1-205ENST00000514271 DSCR10P59022 87 aa4.7□□□□□ -1.66
CLIP1-205ENST00000514271 A6NN06 94 aa4.7□□□□□ -1.66
CLIP1-205ENST00000514271 Q8N377 158 aa4.7□□□□□ -1.66
CLIP1-205ENST00000514271 MPLKIPQ8TAP9 179 aa4.7□□□□□ -1.66
CLIP1-205ENST00000514271 STAB2Q8WWQ8 2551 aa4.7□□□□□ -1.66
CLIP1-205ENST00000514271 BPY2O14599 106 aa4.69□□□□□ -1.66
CLIP1-205ENST00000514271 DNAH2Q9P225 4427 aa4.69□□□□□ -1.66
CLIP1-205ENST00000514271 KRTAP4-12Q9BQ66 201 aa4.69□□□□□ -1.66
CLIP1-205ENST00000514271 A0A1W2PNM2 257 aa4.69□□□□□ -1.66
CLIP1-205ENST00000514271 FAM229AH3BQW9 127 aa4.69□□□□□ -1.66
CLIP1-205ENST00000514271 UNQ6190/PRO20217Q6UXQ8 127 aa4.69□□□□□ -1.66
CLIP1-205ENST00000514271 SMIM29Q86T20 159 aa4.69□□□□□ -1.66
CLIP1-205ENST00000514271 Q6ZQY7 126 aa4.68□□□□□ -1.66
CLIP1-205ENST00000514271 Q6ZRN7 208 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-205ENST00000514271 PLECQ15149 4684 aaKnown RBP4.68□□□□□ -1.66
CLIP1-205ENST00000514271 PSCAO43653 123 aa4.67□□□□□ -1.66
CLIP1-205ENST00000514271 ANGP03950 147 aaKnown RBP4.67□□□□□ -1.66
CLIP1-205ENST00000514271 REG3GQ6UW15 175 aa4.67□□□□□ -1.66
CLIP1-205ENST00000514271 Q9BRP9 147 aa4.67□□□□□ -1.66
CLIP1-205ENST00000514271 SNURFQ9Y675 71 aa4.67□□□□□ -1.66
CLIP1-205ENST00000514271 ATP11AUNQ6ZP68 121 aa4.66□□□□□ -1.66
CLIP1-205ENST00000514271 LINC00269Q8N2A0 174 aa4.66□□□□□ -1.66
CLIP1-205ENST00000514271 STARD9Q9P2P6 4700 aa4.66□□□□□ -1.66
CLIP1-205ENST00000514271 KLK12Q9UKR0 248 aa4.66□□□□□ -1.66
CLIP1-205ENST00000514271 KMT2AQ03164 3969 aa4.66□□□□□ -1.66
CLIP1-205ENST00000514271 RTL8CO15255 209 aa4.66□□□□□ -1.66
CLIP1-205ENST00000514271 C9orf163Q8N9P6 203 aa4.66□□□□□ -1.66
CLIP1-205ENST00000514271 NOTCH2NLQ7Z3S9 236 aa4.65□□□□□ -1.67
CLIP1-205ENST00000514271 A0A087WTM6 91 aa4.65□□□□□ -1.67
CLIP1-205ENST00000514271 UBE2AP49459 152 aa4.65□□□□□ -1.67
CLIP1-205ENST00000514271 IGKV2D-24A0A075B6R9 120 aa4.64□□□□□ -1.67
CLIP1-205ENST00000514271 A0A1B0GVY2 172 aa4.64□□□□□ -1.67
CLIP1-205ENST00000514271 SYCNQ0VAF6 134 aa4.64□□□□□ -1.67
CLIP1-205ENST00000514271 KRTAP1-5Q9BYS1 174 aa4.64□□□□□ -1.67
CLIP1-205ENST00000514271 SCXQ7RTU7 201 aa4.63□□□□□ -1.67
CLIP1-205ENST00000514271 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
CLIP1-205ENST00000514271 TOMM7Q9P0U1 55 aa4.63□□□□□ -1.67
CLIP1-205ENST00000514271 NBEAL2Q6ZNJ1 2754 aa4.63□□□□□ -1.67
CLIP1-205ENST00000514271 PKD1P98161 4303 aa4.63□□□□□ -1.67
CLIP1-205ENST00000514271 CNBPP62633 177 aaKnown RBP4.63□□□□□ -1.67
CLIP1-205ENST00000514271 LRCOL1A6NCL2 159 aa4.62□□□□□ -1.67
CLIP1-205ENST00000514271 C1orf64Q8NEQ6 169 aa4.62□□□□□ -1.67
CLIP1-205ENST00000514271 SPANXA2-OT1Q8N9U9 137 aa4.62□□□□□ -1.67
CLIP1-205ENST00000514271 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.61□□□□□ -1.67
CLIP1-205ENST00000514271 HIGD2AQ9BW72 106 aa4.61□□□□□ -1.67
CLIP1-205ENST00000514271 TGP01266 2768 aa4.61□□□□□ -1.67
CLIP1-205ENST00000514271 Q5VV11 94 aa4.61□□□□□ -1.67
CLIP1-205ENST00000514271 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
CLIP1-205ENST00000514271 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
CLIP1-205ENST00000514271 PKHD1P08F94 4074 aa4.6□□□□□ -1.67
CLIP1-205ENST00000514271 IGLV10-54A0A075B6I4 117 aa4.6□□□□□ -1.67
CLIP1-205ENST00000514271 IGLV1-50A0A075B6I6 118 aa4.6□□□□□ -1.67
CLIP1-205ENST00000514271 LOC101927531A0A1B0GV80 90 aa4.6□□□□□ -1.67
CLIP1-205ENST00000514271 C16orf90A8MZG2 172 aa4.6□□□□□ -1.67
CLIP1-205ENST00000514271 Q8N9L7 120 aa4.6□□□□□ -1.67
CLIP1-205ENST00000514271 SPAG11BQ08648 103 aa4.6□□□□□ -1.67
CLIP1-205ENST00000514271 Q6ZRX8 168 aa4.6□□□□□ -1.67
CLIP1-205ENST00000514271 SACSQ9NZJ4 4579 aa4.6□□□□□ -1.67
CLIP1-205ENST00000514271 Q8NBF4 154 aa4.59□□□□□ -1.67
CLIP1-205ENST00000514271 DNAH11Q96DT5 4516 aa4.59□□□□□ -1.67
CLIP1-205ENST00000514271 RYR2Q92736 4967 aa4.59□□□□□ -1.67
CLIP1-205ENST00000514271 TRAV22A0A0B4J277 110 aa4.59□□□□□ -1.68
CLIP1-205ENST00000514271 CLPSL2Q6UWE3 100 aa4.59□□□□□ -1.68
CLIP1-205ENST00000514271 PKHD1L1Q86WI1 4243 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms