RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 FAM236AA0A1B0GUQ0 79 aa3.98□□□□□ -1.77
CLCN3-208ENST00000512813 FAM236BA0A1B0GV22 79 aa3.98□□□□□ -1.77
CLCN3-208ENST00000512813 F8WEM9 126 aa3.98□□□□□ -1.77
CLCN3-208ENST00000512813 Q6JHZ5 121 aa3.98□□□□□ -1.77
CLCN3-208ENST00000512813 SRP19P09132 144 aaKnown RBP3.97□□□□□ -1.77
CLCN3-208ENST00000512813 MYMXA0A1B0GTQ4 84 aa3.96□□□□□ -1.78
CLCN3-208ENST00000512813 A0A1B0GWB2 263 aa3.96□□□□□ -1.78
CLCN3-208ENST00000512813 ZNF815PA8K554 130 aa3.96□□□□□ -1.78
CLCN3-208ENST00000512813 HBDP02042 147 aa3.96□□□□□ -1.78
CLCN3-208ENST00000512813 KRTAP12-2P59991 146 aa3.96□□□□□ -1.78
CLCN3-208ENST00000512813 MT4P47944 62 aa3.95□□□□□ -1.78
CLCN3-208ENST00000512813 H1FX-AS1Q4G0G2 97 aa3.95□□□□□ -1.78
CLCN3-208ENST00000512813 KRTAP3-1Q9BYR8 98 aa3.95□□□□□ -1.78
CLCN3-208ENST00000512813 NAT8Q9UHE5 227 aa3.95□□□□□ -1.78
CLCN3-208ENST00000512813 LINC00313P59037 77 aa3.94□□□□□ -1.78
CLCN3-208ENST00000512813 RHEBQ15382 184 aa3.94□□□□□ -1.78
CLCN3-208ENST00000512813 SS18L2Q9UHA2 77 aa3.94□□□□□ -1.78
CLCN3-208ENST00000512813 COLCA2A8K830 154 aa3.93□□□□□ -1.78
CLCN3-208ENST00000512813 BAGE3Q86Y29 109 aa3.93□□□□□ -1.78
CLCN3-208ENST00000512813 TRBV7-6A0A0J9YX20 115 aa3.92□□□□□ -1.78
CLCN3-208ENST00000512813 ANKRD39Q53RE8 183 aa3.92□□□□□ -1.78
CLCN3-208ENST00000512813 OR13C6PQ8NH95 151 aa3.92□□□□□ -1.78
CLCN3-208ENST00000512813 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
CLCN3-208ENST00000512813 IFITM2Q01629 132 aa3.91□□□□□ -1.78
CLCN3-208ENST00000512813 A0A096LNJ9 63 aa3.9□□□□□ -1.79
CLCN3-208ENST00000512813 BLOC1S1P78537 153 aa3.9□□□□□ -1.79
CLCN3-208ENST00000512813 SPANXDQ9BXN6 97 aa3.9□□□□□ -1.79
CLCN3-208ENST00000512813 NPC2P61916 151 aa3.89□□□□□ -1.79
CLCN3-208ENST00000512813 MT1XP80297 61 aa3.89□□□□□ -1.79
CLCN3-208ENST00000512813 ZCCHC13Q8WW36 166 aaKnown RBP3.89□□□□□ -1.79
CLCN3-208ENST00000512813 RPS10P5Q9NQ39 176 aa3.89□□□□□ -1.79
CLCN3-208ENST00000512813 TRAV13-2A0A0B4J235 113 aa3.88□□□□□ -1.79
CLCN3-208ENST00000512813 A0A0J9YXY3 114 aa3.88□□□□□ -1.79
CLCN3-208ENST00000512813 TSPEAR-AS2P59090 65 aa3.88□□□□□ -1.79
CLCN3-208ENST00000512813 NMUP48645 174 aa3.87□□□□□ -1.79
CLCN3-208ENST00000512813 SLC51BQ86UW2 128 aa3.87□□□□□ -1.79
CLCN3-208ENST00000512813 ANAPC16Q96DE5 110 aa3.87□□□□□ -1.79
CLCN3-208ENST00000512813 SIGMAR1Q99720 223 aa3.87□□□□□ -1.79
CLCN3-208ENST00000512813 SMCO4Q9NRQ5 59 aa3.87□□□□□ -1.79
CLCN3-208ENST00000512813 SPANXCQ9NY87 97 aa3.87□□□□□ -1.79
CLCN3-208ENST00000512813 OCIAD2Q56VL3 154 aa3.86□□□□□ -1.79
CLCN3-208ENST00000512813 LINC00518Q8N0U6 118 aa3.84□□□□□ -1.79
CLCN3-208ENST00000512813 NHP2Q9NX24 153 aaKnown RBP3.84□□□□□ -1.79
CLCN3-208ENST00000512813 KLKP1Q107X0 134 aa3.83□□□□□ -1.8
CLCN3-208ENST00000512813 ADAMTSL4-AS1Q5T5F5 129 aa3.83□□□□□ -1.8
CLCN3-208ENST00000512813 C9JQL5 133 aa3.82□□□□□ -1.8
CLCN3-208ENST00000512813 TRAV12-1A0A0B4J245 112 aa3.81□□□□□ -1.8
CLCN3-208ENST00000512813 A4D1N5 150 aa3.81□□□□□ -1.8
CLCN3-208ENST00000512813 LEPROTO15243 131 aa3.81□□□□□ -1.8
CLCN3-208ENST00000512813 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
CLCN3-208ENST00000512813 RBM3P98179 157 aaKnown RBP3.8□□□□□ -1.8
CLCN3-208ENST00000512813 SLC7A5P1Q8MH63 180 aa3.8□□□□□ -1.8
CLCN3-208ENST00000512813 A0A087WSZ3 146 aa3.79□□□□□ -1.8
CLCN3-208ENST00000512813 LINC00308Q8TCZ7 52 aa3.79□□□□□ -1.8
CLCN3-208ENST00000512813 J3QQQ9 107 aa3.78□□□□□ -1.8
CLCN3-208ENST00000512813 PMCHL1Q16048 86 aa3.78□□□□□ -1.8
CLCN3-208ENST00000512813 H3BUT2 72 aa3.77□□□□□ -1.81
CLCN3-208ENST00000512813 C3orf79P0CE67 100 aa3.77□□□□□ -1.81
CLCN3-208ENST00000512813 C5orf47Q569G3 176 aa3.77□□□□□ -1.81
CLCN3-208ENST00000512813 TEN1Q86WV5 123 aa3.77□□□□□ -1.81
CLCN3-208ENST00000512813 SCGB1D1O95968 90 aa3.76□□□□□ -1.81
CLCN3-208ENST00000512813 IGKV4-1P06312 121 aa3.76□□□□□ -1.81
CLCN3-208ENST00000512813 URB1-AS1Q96HZ7 61 aa3.76□□□□□ -1.81
CLCN3-208ENST00000512813 IGHV6-1A0A0B4J1U7 121 aa3.75□□□□□ -1.81
CLCN3-208ENST00000512813 C9orf118A6NHY6 69 aa3.74□□□□□ -1.81
CLCN3-208ENST00000512813 Q6ZQY7 126 aa3.74□□□□□ -1.81
CLCN3-208ENST00000512813 PRR15Q8IV56 129 aa3.74□□□□□ -1.81
CLCN3-208ENST00000512813 CRIPTQ9P021 101 aa3.74□□□□□ -1.81
CLCN3-208ENST00000512813 LINC00614P0C842 121 aa3.73□□□□□ -1.81
CLCN3-208ENST00000512813 LITAFQ99732 161 aa3.73□□□□□ -1.81
CLCN3-208ENST00000512813 MT-ND4LP03901 98 aa3.72□□□□□ -1.81
CLCN3-208ENST00000512813 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
CLCN3-208ENST00000512813 LCA10Q71F78 164 aa3.71□□□□□ -1.82
CLCN3-208ENST00000512813 IFI27L1Q96BM0 104 aa3.71□□□□□ -1.82
CLCN3-208ENST00000512813 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
CLCN3-208ENST00000512813 C8orf87E5RJ46 101 aa3.7□□□□□ -1.82
CLCN3-208ENST00000512813 PEA15Q15121 130 aa3.7□□□□□ -1.82
CLCN3-208ENST00000512813 PPDPFLQ8WWR9 84 aa3.7□□□□□ -1.82
CLCN3-208ENST00000512813 DSCR8Q96T75 97 aa3.7□□□□□ -1.82
CLCN3-208ENST00000512813 LINC00575Q6W349 94 aa3.69□□□□□ -1.82
CLCN3-208ENST00000512813 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
CLCN3-208ENST00000512813 KRTAP10-12P60413 245 aa3.68□□□□□ -1.82
CLCN3-208ENST00000512813 HERVK_113P61574 105 aa3.68□□□□□ -1.82
CLCN3-208ENST00000512813 C18orf32Q8TCD1 76 aa3.68□□□□□ -1.82
CLCN3-208ENST00000512813 SNHG12Q9BXW3 62 aa3.68□□□□□ -1.82
CLCN3-208ENST00000512813 TIMM17BO60830 172 aa3.67□□□□□ -1.82
CLCN3-208ENST00000512813 CSAG1Q6PB30 78 aa3.67□□□□□ -1.82
CLCN3-208ENST00000512813 IGKV3D-7A0A0C4DH55 119 aa3.66□□□□□ -1.82
CLCN3-208ENST00000512813 hADV29S1A0JD25 119 aa3.66□□□□□ -1.82
CLCN3-208ENST00000512813 A6NDN8 102 aa3.66□□□□□ -1.82
CLCN3-208ENST00000512813 SERF1AO75920 110 aa3.66□□□□□ -1.82
CLCN3-208ENST00000512813 TCTE3Q8IZS6 198 aa3.66□□□□□ -1.82
CLCN3-208ENST00000512813 RAB37Q96AX2 223 aa3.66□□□□□ -1.82
CLCN3-208ENST00000512813 SEC11CQ9BY50 192 aa3.66□□□□□ -1.82
CLCN3-208ENST00000512813 PLNP26678 52 aa3.65□□□□□ -1.83
CLCN3-208ENST00000512813 FABP9Q0Z7S8 132 aa3.65□□□□□ -1.83
CLCN3-208ENST00000512813 RGS21Q2M5E4 152 aa3.65□□□□□ -1.83
CLCN3-208ENST00000512813 DEFB116Q30KQ4 102 aa3.65□□□□□ -1.83
CLCN3-208ENST00000512813 SMIM11BQ8TCY0 68 aa3.65□□□□□ -1.83
CLCN3-208ENST00000512813 hCG_2014768A0A024R1R8 64 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms