RNA–Protein interactions for RNA: ENST00000512701.6

TTC39B-208, Transcript of tetratricopeptide repeat domain 39B, human

APPRIS P3 TSL 2 BASIC

Gene TTC39B, Length 10,483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC39B-208	ENST00000512701	SPATA8	Q6RVD6	105 aa		4.71	□□□□□ -1.66
TTC39B-208	ENST00000512701		A8MU10	97 aa		4.69	□□□□□ -1.66
TTC39B-208	ENST00000512701	KRTAP1-3	Q8IUG1	177 aa		4.69	□□□□□ -1.66
TTC39B-208	ENST00000512701	CENPE	Q02224	2701 aa		4.68	□□□□□ -1.66
TTC39B-208	ENST00000512701	AKAP13	Q12802	2813 aa		4.68	□□□□□ -1.66
TTC39B-208	ENST00000512701	FLNB	O75369	2602 aa	Known RBP	4.68	□□□□□ -1.66
TTC39B-208	ENST00000512701	ADM2	Q7Z4H4	148 aa		4.67	□□□□□ -1.66
TTC39B-208	ENST00000512701	ITPR3	Q14573	2671 aa		4.67	□□□□□ -1.66
TTC39B-208	ENST00000512701	KRTAP1-1	Q07627	177 aa		4.67	□□□□□ -1.66
TTC39B-208	ENST00000512701		S4R3F8	94 aa		4.67	□□□□□ -1.66
TTC39B-208	ENST00000512701	CHD6	Q8TD26	2715 aa		4.66	□□□□□ -1.66
TTC39B-208	ENST00000512701	ZCCHC13	Q8WW36	166 aa	Known RBP	4.66	□□□□□ -1.66
TTC39B-208	ENST00000512701		Q6ZSA8	131 aa		4.65	□□□□□ -1.66
TTC39B-208	ENST00000512701	MAST4	O15021	2626 aa		4.64	□□□□□ -1.67
TTC39B-208	ENST00000512701	GCN1	Q92616	2671 aa	Known RBP	4.63	□□□□□ -1.67
TTC39B-208	ENST00000512701	LINC00483	Q53H64	154 aa		4.63	□□□□□ -1.67
TTC39B-208	ENST00000512701	KRTAP1-5	Q9BYS1	174 aa		4.63	□□□□□ -1.67
TTC39B-208	ENST00000512701	LINC00472	Q9H8W2	130 aa		4.63	□□□□□ -1.67
TTC39B-208	ENST00000512701	KRTAP26-1	Q6PEX3	210 aa		4.62	□□□□□ -1.67
TTC39B-208	ENST00000512701	CDH23	Q9H251	3354 aa		4.62	□□□□□ -1.67
TTC39B-208	ENST00000512701		M0R2T5	61 aa		4.62	□□□□□ -1.67
TTC39B-208	ENST00000512701	CELSR3	Q9NYQ7	3312 aa		4.61	□□□□□ -1.67
TTC39B-208	ENST00000512701		A0A087X002	238 aa		4.6	□□□□□ -1.67
TTC39B-208	ENST00000512701	NOTCH2NL	Q7Z3S9	236 aa		4.6	□□□□□ -1.67
TTC39B-208	ENST00000512701	DMAC1	Q96GE9	116 aa		4.6	□□□□□ -1.67
TTC39B-208	ENST00000512701	ROMO1	P60602	79 aa		4.59	□□□□□ -1.68
TTC39B-208	ENST00000512701	PANO1	I0J062	215 aa		4.59	□□□□□ -1.68
TTC39B-208	ENST00000512701	RANBP2	P49792	3224 aa	Known RBP	4.58	□□□□□ -1.68
TTC39B-208	ENST00000512701		A0A0A0MQY5	61 aa		4.58	□□□□□ -1.68
TTC39B-208	ENST00000512701	CHD7	Q9P2D1	2997 aa		4.58	□□□□□ -1.68
TTC39B-208	ENST00000512701	NBEAL2	Q6ZNJ1	2754 aa		4.58	□□□□□ -1.68
TTC39B-208	ENST00000512701	VCAN	P13611	3396 aa		4.58	□□□□□ -1.68
TTC39B-208	ENST00000512701	H1FX-AS1	Q4G0G2	97 aa		4.58	□□□□□ -1.68
TTC39B-208	ENST00000512701	UNC79	Q9P2D8	2635 aa		4.57	□□□□□ -1.68
TTC39B-208	ENST00000512701	MAP1A	P78559	2803 aa	Predicted RBP	4.57	□□□□□ -1.68
TTC39B-208	ENST00000512701	NBEAL1	Q6ZS30	2694 aa		4.57	□□□□□ -1.68
TTC39B-208	ENST00000512701	FREM2	Q5SZK8	3169 aa		4.56	□□□□□ -1.68
TTC39B-208	ENST00000512701	SPRR1A	P35321	89 aa		4.56	□□□□□ -1.68
TTC39B-208	ENST00000512701	VPS13A	Q96RL7	3174 aa		4.56	□□□□□ -1.68
TTC39B-208	ENST00000512701	LAMA2	P24043	3122 aa	Known RBP	4.56	□□□□□ -1.68
TTC39B-208	ENST00000512701	EYS	Q5T1H1	3165 aa		4.56	□□□□□ -1.68
TTC39B-208	ENST00000512701		M0QZ58	72 aa		4.55	□□□□□ -1.68
TTC39B-208	ENST00000512701		R4GN34	69 aa		4.54	□□□□□ -1.68
TTC39B-208	ENST00000512701	FLG2	Q5D862	2391 aa	Predicted RBP	4.54	□□□□□ -1.68
TTC39B-208	ENST00000512701	NOTCH1	P46531	2555 aa		4.54	□□□□□ -1.68
TTC39B-208	ENST00000512701		A6NN06	94 aa		4.53	□□□□□ -1.68
TTC39B-208	ENST00000512701	RPL37	P61927	97 aa	Known RBP	4.53	□□□□□ -1.68
TTC39B-208	ENST00000512701	KRTAP10-2	P60368	255 aa		4.53	□□□□□ -1.68
TTC39B-208	ENST00000512701	PLAC8	Q9NZF1	115 aa		4.52	□□□□□ -1.69
TTC39B-208	ENST00000512701	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.52	□□□□□ -1.69
TTC39B-208	ENST00000512701	CFAP46	Q8IYW2	2715 aa		4.52	□□□□□ -1.69
TTC39B-208	ENST00000512701	MGA	Q8IWI9	3026 aa		4.51	□□□□□ -1.69
TTC39B-208	ENST00000512701		Q6ZR54	194 aa		4.51	□□□□□ -1.69
TTC39B-208	ENST00000512701	KRTAP11-1	Q8IUC1	163 aa		4.51	□□□□□ -1.69
TTC39B-208	ENST00000512701	NDUFAF8	A1L188	74 aa		4.51	□□□□□ -1.69
TTC39B-208	ENST00000512701	TEP1	Q99973	2627 aa	Known RBP	4.51	□□□□□ -1.69
TTC39B-208	ENST00000512701	TEX15	Q9BXT5	2789 aa		4.51	□□□□□ -1.69
TTC39B-208	ENST00000512701	KRTAP10-1	P60331	282 aa		4.5	□□□□□ -1.69
TTC39B-208	ENST00000512701	SPEG	Q15772	3267 aa		4.5	□□□□□ -1.69
TTC39B-208	ENST00000512701	BAHCC1	Q9P281	2608 aa		4.5	□□□□□ -1.69
TTC39B-208	ENST00000512701	TRANK1	O15050	2925 aa		4.49	□□□□□ -1.69
TTC39B-208	ENST00000512701	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.49	□□□□□ -1.69
TTC39B-208	ENST00000512701	CHD9	Q3L8U1	2897 aa		4.47	□□□□□ -1.69
TTC39B-208	ENST00000512701	KRTAP16-1	A8MUX0	517 aa		4.46	□□□□□ -1.69
TTC39B-208	ENST00000512701	KRTAP25-1	Q3LHN0	102 aa		4.46	□□□□□ -1.7
TTC39B-208	ENST00000512701	SPRR1B	P22528	89 aa		4.46	□□□□□ -1.7
TTC39B-208	ENST00000512701	HELZ2	Q9BYK8	2649 aa	Known RBP	4.46	□□□□□ -1.7
TTC39B-208	ENST00000512701	COL6A5	A8TX70	2615 aa		4.46	□□□□□ -1.7
TTC39B-208	ENST00000512701	DNAH14	Q0VDD8	3507 aa		4.45	□□□□□ -1.7
TTC39B-208	ENST00000512701	STAB2	Q8WWQ8	2551 aa		4.45	□□□□□ -1.7
TTC39B-208	ENST00000512701	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.44	□□□□□ -1.7
TTC39B-208	ENST00000512701	WDFY4	Q6ZS81	3184 aa		4.44	□□□□□ -1.7
TTC39B-208	ENST00000512701	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.44	□□□□□ -1.7
TTC39B-208	ENST00000512701	TRIO	O75962	3097 aa		4.44	□□□□□ -1.7
TTC39B-208	ENST00000512701		Q5VSD8	79 aa		4.43	□□□□□ -1.7
TTC39B-208	ENST00000512701	STAB1	Q9NY15	2570 aa		4.43	□□□□□ -1.7
TTC39B-208	ENST00000512701	CFAP47	Q6ZTR5	3102 aa		4.42	□□□□□ -1.7
TTC39B-208	ENST00000512701	COL6A3	P12111	3177 aa		4.42	□□□□□ -1.7
TTC39B-208	ENST00000512701	FRY	Q5TBA9	3013 aa		4.41	□□□□□ -1.7
TTC39B-208	ENST00000512701	HTT	P42858	3142 aa		4.41	□□□□□ -1.7
TTC39B-208	ENST00000512701	KRTAP7-1	Q8IUC3	87 aa		4.4	□□□□□ -1.7
TTC39B-208	ENST00000512701	NSD1	Q96L73	2696 aa	Predicted RBP	4.4	□□□□□ -1.7
TTC39B-208	ENST00000512701	DSP	P15924	2871 aa	Known RBP	4.4	□□□□□ -1.71
TTC39B-208	ENST00000512701	C20orf166-AS1	Q96NR2	134 aa		4.39	□□□□□ -1.71
TTC39B-208	ENST00000512701	C10orf95	Q9H7T3	257 aa		4.39	□□□□□ -1.71
TTC39B-208	ENST00000512701	MYO15A	Q9UKN7	3530 aa		4.38	□□□□□ -1.71
TTC39B-208	ENST00000512701	KALRN	O60229	2985 aa		4.38	□□□□□ -1.71
TTC39B-208	ENST00000512701	SETX	Q7Z333	2677 aa	Known RBP	4.37	□□□□□ -1.71
TTC39B-208	ENST00000512701	USP34	Q70CQ2	3546 aa		4.37	□□□□□ -1.71
TTC39B-208	ENST00000512701	PLAC4	Q8WY50	150 aa		4.36	□□□□□ -1.71
TTC39B-208	ENST00000512701	NBEA	Q8NFP9	2946 aa		4.35	□□□□□ -1.71
TTC39B-208	ENST00000512701		A8MUU9	505 aa		4.35	□□□□□ -1.71
TTC39B-208	ENST00000512701	HIVEP1	P15822	2718 aa		4.34	□□□□□ -1.72
TTC39B-208	ENST00000512701	CRYBG3	Q68DQ2	2970 aa		4.33	□□□□□ -1.72
TTC39B-208	ENST00000512701	ITPR1	Q14643	2758 aa		4.33	□□□□□ -1.72
TTC39B-208	ENST00000512701	REV3L	O60673	3130 aa		4.33	□□□□□ -1.72
TTC39B-208	ENST00000512701	ASH1L	Q9NR48	2969 aa	Known RBP	4.32	□□□□□ -1.72
TTC39B-208	ENST00000512701	UBR5	O95071	2799 aa	Predicted RBP	4.32	□□□□□ -1.72
TTC39B-208	ENST00000512701	KRTAP13-2	Q52LG2	175 aa		4.31	□□□□□ -1.72
TTC39B-208	ENST00000512701	LRBA	P50851	2863 aa		4.3	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 286 ms