RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SMIM29Q86T20 159 aa6.83□□□□□ -1.32
VEGFA-216ENST00000512683 DEFB105AQ8NG35 78 aa6.83□□□□□ -1.32
VEGFA-216ENST00000512683 SNHG12Q9BXW3 62 aa6.83□□□□□ -1.32
VEGFA-216ENST00000512683 TEX49A0A1B0GTD5 131 aa6.82□□□□□ -1.32
VEGFA-216ENST00000512683 A0A1B0GWB2 263 aa6.82□□□□□ -1.32
VEGFA-216ENST00000512683 A6NDN8 102 aa6.82□□□□□ -1.32
VEGFA-216ENST00000512683 MT1HP80294 61 aa6.82□□□□□ -1.32
VEGFA-216ENST00000512683 IGLV5-48A0A075B6I7 105 aa6.81□□□□□ -1.32
VEGFA-216ENST00000512683 A0A1B0GV90 55 aa6.8□□□□□ -1.32
VEGFA-216ENST00000512683 SMIM11BQ8TCY0 68 aa6.8□□□□□ -1.32
VEGFA-216ENST00000512683 H7C2G1 150 aa6.79□□□□□ -1.32
VEGFA-216ENST00000512683 TRAV13-2A0A0B4J235 113 aa6.78□□□□□ -1.32
VEGFA-216ENST00000512683 A4D1N5 150 aa6.78□□□□□ -1.32
VEGFA-216ENST00000512683 A0A0G2JQZ4 141 aa6.77□□□□□ -1.33
VEGFA-216ENST00000512683 C9orf92A6NGG3 77 aa6.77□□□□□ -1.33
VEGFA-216ENST00000512683 DLEU1O43261 78 aa6.77□□□□□ -1.33
VEGFA-216ENST00000512683 COX8AP10176 69 aa6.77□□□□□ -1.33
VEGFA-216ENST00000512683 BATFQ16520 125 aa6.76□□□□□ -1.33
VEGFA-216ENST00000512683 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
VEGFA-216ENST00000512683 C1orf195Q5TG92 126 aa6.74□□□□□ -1.33
VEGFA-216ENST00000512683 NHP2Q9NX24 153 aaKnown RBP6.74□□□□□ -1.33
VEGFA-216ENST00000512683 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
VEGFA-216ENST00000512683 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
VEGFA-216ENST00000512683 LINC00575Q6W349 94 aa6.73□□□□□ -1.33
VEGFA-216ENST00000512683 TCL1BO95988 128 aa6.72□□□□□ -1.33
VEGFA-216ENST00000512683 M0R2T5 61 aa6.71□□□□□ -1.34
VEGFA-216ENST00000512683 VAMP3Q15836 100 aa6.7□□□□□ -1.34
VEGFA-216ENST00000512683 HIGD1BQ9P298 99 aa6.7□□□□□ -1.34
VEGFA-216ENST00000512683 HSD52Q0P140 79 aa6.69□□□□□ -1.34
VEGFA-216ENST00000512683 BVES-AS1Q5T3Y7 98 aa6.69□□□□□ -1.34
VEGFA-216ENST00000512683 hADV29S1A0JD25 119 aa6.68□□□□□ -1.34
VEGFA-216ENST00000512683 COX6B2Q6YFQ2 88 aa6.68□□□□□ -1.34
VEGFA-216ENST00000512683 Q6ZQY7 126 aa6.68□□□□□ -1.34
VEGFA-216ENST00000512683 HIST1H4GQ99525 98 aa6.66□□□□□ -1.34
VEGFA-216ENST00000512683 C2orf91Q6ZV80 131 aa6.65□□□□□ -1.34
VEGFA-216ENST00000512683 F8WEM9 126 aa6.64□□□□□ -1.35
VEGFA-216ENST00000512683 UBE2V1Q13404 147 aa6.64□□□□□ -1.35
VEGFA-216ENST00000512683 IGFL1Q6UW32 110 aa6.64□□□□□ -1.35
VEGFA-216ENST00000512683 OCIAD2Q56VL3 154 aa6.63□□□□□ -1.35
VEGFA-216ENST00000512683 Q6JHZ5 121 aa6.63□□□□□ -1.35
VEGFA-216ENST00000512683 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.63□□□□□ -1.35
VEGFA-216ENST00000512683 TAX1BP3O14907 124 aa6.62□□□□□ -1.35
VEGFA-216ENST00000512683 CFC1P0CG37 223 aa6.62□□□□□ -1.35
VEGFA-216ENST00000512683 GTF2H5Q6ZYL4 71 aa6.62□□□□□ -1.35
VEGFA-216ENST00000512683 CLEC2BQ92478 149 aa6.62□□□□□ -1.35
VEGFA-216ENST00000512683 TRBV7-7A0A0K0K1E9 115 aa6.61□□□□□ -1.35
VEGFA-216ENST00000512683 FLGP20930 4061 aaPredicted RBP6.6□□□□□ -1.35
VEGFA-216ENST00000512683 C9orf118A6NHY6 69 aa6.6□□□□□ -1.35
VEGFA-216ENST00000512683 ATP11AUNQ6ZP68 121 aa6.6□□□□□ -1.35
VEGFA-216ENST00000512683 PPDPFLQ8WWR9 84 aa6.6□□□□□ -1.35
VEGFA-216ENST00000512683 TMEM238LA0A1B0GVL6 79 aa6.59□□□□□ -1.35
VEGFA-216ENST00000512683 A6NJY4 79 aa6.59□□□□□ -1.35
VEGFA-216ENST00000512683 Q75L30 129 aa6.59□□□□□ -1.35
VEGFA-216ENST00000512683 CEND1Q8N111 149 aa6.59□□□□□ -1.35
VEGFA-216ENST00000512683 A0A0B4J2C4 111 aa6.57□□□□□ -1.36
VEGFA-216ENST00000512683 H3BUT2 72 aa6.57□□□□□ -1.36
VEGFA-216ENST00000512683 FAM218AQ96MZ4 157 aa6.57□□□□□ -1.36
VEGFA-216ENST00000512683 FABP2P12104 132 aa6.56□□□□□ -1.36
VEGFA-216ENST00000512683 RAB37Q96AX2 223 aa6.56□□□□□ -1.36
VEGFA-216ENST00000512683 H0YGX0 51 aa6.55□□□□□ -1.36
VEGFA-216ENST00000512683 A0A1W2PPM0 123 aa6.53□□□□□ -1.36
VEGFA-216ENST00000512683 LYRM7Q5U5X0 104 aa6.53□□□□□ -1.36
VEGFA-216ENST00000512683 OBSCN-AS1Q96MR7 158 aa6.53□□□□□ -1.36
VEGFA-216ENST00000512683 LST1O00453 97 aa6.52□□□□□ -1.37
VEGFA-216ENST00000512683 FXYD2P54710 66 aa6.52□□□□□ -1.37
VEGFA-216ENST00000512683 NDUFV3P56181 108 aaKnown RBP6.52□□□□□ -1.37
VEGFA-216ENST00000512683 Q6Q795 121 aa6.52□□□□□ -1.37
VEGFA-216ENST00000512683 K7EP34 96 aa6.51□□□□□ -1.37
VEGFA-216ENST00000512683 PRO1854Q9UHT4 67 aa6.51□□□□□ -1.37
VEGFA-216ENST00000512683 SNCGO76070 127 aa6.5□□□□□ -1.37
VEGFA-216ENST00000512683 SPCS1Q9Y6A9 102 aa6.5□□□□□ -1.37
VEGFA-216ENST00000512683 K7ERU9 68 aa6.49□□□□□ -1.37
VEGFA-216ENST00000512683 TEN1Q86WV5 123 aa6.49□□□□□ -1.37
VEGFA-216ENST00000512683 SS18L2Q9UHA2 77 aa6.49□□□□□ -1.37
VEGFA-216ENST00000512683 A0A1B0GX51 115 aa6.48□□□□□ -1.37
VEGFA-216ENST00000512683 TRBV20-1A0A075B6N2 111 aa6.47□□□□□ -1.37
VEGFA-216ENST00000512683 H3BMG7 143 aa6.47□□□□□ -1.37
VEGFA-216ENST00000512683 TRIAP1O43715 76 aa6.47□□□□□ -1.37
VEGFA-216ENST00000512683 Q96NJ1 140 aa6.47□□□□□ -1.37
VEGFA-216ENST00000512683 C20orf166-AS1Q96NR2 134 aa6.47□□□□□ -1.37
VEGFA-216ENST00000512683 F8W1H4 67 aa6.46□□□□□ -1.38
VEGFA-216ENST00000512683 A0A087WSZ3 146 aa6.45□□□□□ -1.38
VEGFA-216ENST00000512683 A8MUU9 505 aa6.45□□□□□ -1.38
VEGFA-216ENST00000512683 A0A1W2PNM2 257 aa6.44□□□□□ -1.38
VEGFA-216ENST00000512683 J3QR89 54 aa6.44□□□□□ -1.38
VEGFA-216ENST00000512683 KRTAP9-8Q9BYQ0 159 aa6.44□□□□□ -1.38
VEGFA-216ENST00000512683 GHRHP01286 108 aa6.43□□□□□ -1.38
VEGFA-216ENST00000512683 K7ERJ3 54 aa6.42□□□□□ -1.38
VEGFA-216ENST00000512683 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.41□□□□□ -1.38
VEGFA-216ENST00000512683 NAA38Q9BRA0 125 aaKnown RBP6.41□□□□□ -1.38
VEGFA-216ENST00000512683 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
VEGFA-216ENST00000512683 SCGB1C2P0DMR2 95 aa6.4□□□□□ -1.38
VEGFA-216ENST00000512683 ORMDL1Q9P0S3 153 aa6.39□□□□□ -1.39
VEGFA-216ENST00000512683 COX6CP09669 75 aa6.38□□□□□ -1.39
VEGFA-216ENST00000512683 PSMB2P49721 201 aa6.38□□□□□ -1.39
VEGFA-216ENST00000512683 TRBV7-4A0A0J9YYF1 115 aa6.37□□□□□ -1.39
VEGFA-216ENST00000512683 A0A1B0GV72 72 aa6.37□□□□□ -1.39
VEGFA-216ENST00000512683 DNAL4O96015 105 aa6.37□□□□□ -1.39
VEGFA-216ENST00000512683 DSCR10P59022 87 aa6.37□□□□□ -1.39
VEGFA-216ENST00000512683 ANKRD29Q8N6D5 301 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms