RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 ELOF1P60002 83 aaKnown RBP2.97□□□□□ -1.93
GYPB-208ENST00000507009 LINC00308Q8TCZ7 52 aa2.97□□□□□ -1.93
GYPB-208ENST00000507009 SPANXCQ9NY87 97 aa2.97□□□□□ -1.93
GYPB-208ENST00000507009 C20orf202A1L168 122 aa2.96□□□□□ -1.94
GYPB-208ENST00000507009 Q5XG85 94 aa2.96□□□□□ -1.94
GYPB-208ENST00000507009 SPANXDQ9BXN6 97 aa2.96□□□□□ -1.94
GYPB-208ENST00000507009 FAM236DA0A1B0GTK5 79 aa2.95□□□□□ -1.94
GYPB-208ENST00000507009 F8WEM9 126 aa2.95□□□□□ -1.94
GYPB-208ENST00000507009 SERF1AO75920 110 aa2.95□□□□□ -1.94
GYPB-208ENST00000507009 APOC3P02656 99 aa2.95□□□□□ -1.94
GYPB-208ENST00000507009 FAM236CP0DP71 79 aa2.95□□□□□ -1.94
GYPB-208ENST00000507009 LINC00518Q8N0U6 118 aa2.95□□□□□ -1.94
GYPB-208ENST00000507009 Q96NJ1 140 aa2.95□□□□□ -1.94
GYPB-208ENST00000507009 PAM16Q9Y3D7 125 aa2.95□□□□□ -1.94
GYPB-208ENST00000507009 TRBV20-1A0A075B6N2 111 aa2.94□□□□□ -1.94
GYPB-208ENST00000507009 A6NDN8 102 aa2.94□□□□□ -1.94
GYPB-208ENST00000507009 MT2AP02795 61 aa2.94□□□□□ -1.94
GYPB-208ENST00000507009 IGKV2-30P06310 120 aa2.94□□□□□ -1.94
GYPB-208ENST00000507009 C10orf91Q5T1B1 145 aa2.94□□□□□ -1.94
GYPB-208ENST00000507009 HSPB8Q9UJY1 196 aa2.94□□□□□ -1.94
GYPB-208ENST00000507009 ZNF815PA8K554 130 aa2.93□□□□□ -1.94
GYPB-208ENST00000507009 E9PLD3 99 aa2.93□□□□□ -1.94
GYPB-208ENST00000507009 KRTAP10-10P60014 251 aa2.93□□□□□ -1.94
GYPB-208ENST00000507009 Q75L30 129 aa2.93□□□□□ -1.94
GYPB-208ENST00000507009 SLC7A5P1Q8MH63 180 aa2.93□□□□□ -1.94
GYPB-208ENST00000507009 LITAFQ99732 161 aa2.93□□□□□ -1.94
GYPB-208ENST00000507009 TTTY13Q9BZ97 58 aa2.93□□□□□ -1.94
GYPB-208ENST00000507009 IGLV5-48A0A075B6I7 105 aa2.92□□□□□ -1.94
GYPB-208ENST00000507009 A0A1B0GWB2 263 aa2.92□□□□□ -1.94
GYPB-208ENST00000507009 MT1FP04733 61 aa2.92□□□□□ -1.94
GYPB-208ENST00000507009 KRTAP10-7P60409 375 aaPredicted RBP2.92□□□□□ -1.94
GYPB-208ENST00000507009 TIMM17BO60830 172 aa2.91□□□□□ -1.94
GYPB-208ENST00000507009 SNAPINO95295 136 aa2.91□□□□□ -1.94
GYPB-208ENST00000507009 TRGC2P03986 189 aa2.91□□□□□ -1.94
GYPB-208ENST00000507009 NDUFA5Q16718 116 aa2.91□□□□□ -1.94
GYPB-208ENST00000507009 IGFL1Q6UW32 110 aa2.91□□□□□ -1.94
GYPB-208ENST00000507009 TRBV7-6A0A0J9YX20 115 aa2.9□□□□□ -1.95
GYPB-208ENST00000507009 TRBV7-7A0A0K0K1E9 115 aa2.9□□□□□ -1.95
GYPB-208ENST00000507009 SNRPEP62304 92 aaKnown RBP2.9□□□□□ -1.95
GYPB-208ENST00000507009 SCGB1D4Q6XE38 83 aa2.9□□□□□ -1.95
GYPB-208ENST00000507009 SVBPQ8N300 66 aa2.9□□□□□ -1.95
GYPB-208ENST00000507009 C20orf166-AS1Q96NR2 134 aa2.9□□□□□ -1.95
GYPB-208ENST00000507009 YPEL4Q96NS1 127 aa2.9□□□□□ -1.95
GYPB-208ENST00000507009 NHP2Q9NX24 153 aaKnown RBP2.9□□□□□ -1.95
GYPB-208ENST00000507009 LST1O00453 97 aa2.89□□□□□ -1.95
GYPB-208ENST00000507009 SMIM11BQ8TCY0 68 aa2.89□□□□□ -1.95
GYPB-208ENST00000507009 CLEC2BQ92478 149 aa2.89□□□□□ -1.95
GYPB-208ENST00000507009 LINC00846Q9NV44 126 aa2.89□□□□□ -1.95
GYPB-208ENST00000507009 DSCR10P59022 87 aa2.88□□□□□ -1.95
GYPB-208ENST00000507009 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
GYPB-208ENST00000507009 Q6ZQY7 126 aa2.88□□□□□ -1.95
GYPB-208ENST00000507009 MUSTN1Q8IVN3 82 aa2.88□□□□□ -1.95
GYPB-208ENST00000507009 TRAV13-2A0A0B4J235 113 aa2.87□□□□□ -1.95
GYPB-208ENST00000507009 A4D1N5 150 aa2.87□□□□□ -1.95
GYPB-208ENST00000507009 SYS1-DBNDD2H3BUS1 97 aa2.87□□□□□ -1.95
GYPB-208ENST00000507009 H3BUT2 72 aa2.87□□□□□ -1.95
GYPB-208ENST00000507009 UBE2V1Q13404 147 aa2.87□□□□□ -1.95
GYPB-208ENST00000507009 Q6JHZ5 121 aa2.87□□□□□ -1.95
GYPB-208ENST00000507009 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
GYPB-208ENST00000507009 RBM12B-AS1Q9P1G2 102 aa2.87□□□□□ -1.95
GYPB-208ENST00000507009 hADV29S1A0JD25 119 aa2.86□□□□□ -1.95
GYPB-208ENST00000507009 A8MUU9 505 aa2.86□□□□□ -1.95
GYPB-208ENST00000507009 VAMP3Q15836 100 aa2.86□□□□□ -1.95
GYPB-208ENST00000507009 OCIAD2Q56VL3 154 aa2.86□□□□□ -1.95
GYPB-208ENST00000507009 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
GYPB-208ENST00000507009 COPS9Q8WXC6 57 aa2.86□□□□□ -1.95
GYPB-208ENST00000507009 IFITM1P13164 125 aa2.85□□□□□ -1.95
GYPB-208ENST00000507009 LINC00575Q6W349 94 aa2.85□□□□□ -1.95
GYPB-208ENST00000507009 SIGMAR1Q99720 223 aa2.85□□□□□ -1.95
GYPB-208ENST00000507009 SNHG12Q9BXW3 62 aa2.85□□□□□ -1.95
GYPB-208ENST00000507009 KRTDAPP60985 99 aa2.84□□□□□ -1.95
GYPB-208ENST00000507009 LINC01545Q5VT33 79 aa2.84□□□□□ -1.95
GYPB-208ENST00000507009 ATOH7Q8N100 152 aa2.84□□□□□ -1.95
GYPB-208ENST00000507009 KRTAP16-1A8MUX0 517 aa2.83□□□□□ -1.96
GYPB-208ENST00000507009 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
GYPB-208ENST00000507009 SS18L2Q9UHA2 77 aa2.83□□□□□ -1.96
GYPB-208ENST00000507009 A0A087WSZ3 146 aa2.82□□□□□ -1.96
GYPB-208ENST00000507009 C3orf79P0CE67 100 aa2.82□□□□□ -1.96
GYPB-208ENST00000507009 HRES1P13985 223 aa2.82□□□□□ -1.96
GYPB-208ENST00000507009 KRTAP6-3Q3LI67 103 aa2.82□□□□□ -1.96
GYPB-208ENST00000507009 LINC00313P59037 77 aa2.81□□□□□ -1.96
GYPB-208ENST00000507009 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.81□□□□□ -1.96
GYPB-208ENST00000507009 Q6ZVH6 145 aa2.81□□□□□ -1.96
GYPB-208ENST00000507009 C12orf57Q99622 126 aa2.81□□□□□ -1.96
GYPB-208ENST00000507009 COLCA2A8K830 154 aa2.8□□□□□ -1.96
GYPB-208ENST00000507009 IGKV4-1P06312 121 aa2.8□□□□□ -1.96
GYPB-208ENST00000507009 NEBP20929 6669 aa2.8□□□□□ -1.96
GYPB-208ENST00000507009 A0A1B0GV72 72 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 HIST1H2BKO60814 126 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 HIST1H2BJP06899 126 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 HIST1H2BOP23527 126 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 HIST1H2BBP33778 126 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 HIST1H2BDP58876 126 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 HIST1H2BCP62807 126 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 HIST2H2BEQ16778 126 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 DEFB116Q30KQ4 102 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.79□□□□□ -1.96
GYPB-208ENST00000507009 NOTCH2NLQ7Z3S9 236 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 TEN1Q86WV5 123 aa2.79□□□□□ -1.96
GYPB-208ENST00000507009 MTURNQ8N3F0 131 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms