RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 NDUFC1O43677 76 aa8.98□□□□□ -0.97
TCOF1-207ENST00000504761 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.97□□□□□ -0.97
TCOF1-207ENST00000504761 VWFP04275 2813 aa8.97□□□□□ -0.97
TCOF1-207ENST00000504761 ZNF861PO60384 105 aa8.97□□□□□ -0.97
TCOF1-207ENST00000504761 PLA2G1BP04054 148 aaKnown RBP8.96□□□□□ -0.97
TCOF1-207ENST00000504761 TYMSOSQ8TAI1 123 aa8.96□□□□□ -0.97
TCOF1-207ENST00000504761 TRBV7-4A0A0J9YYF1 115 aa8.95□□□□□ -0.98
TCOF1-207ENST00000504761 H0Y9P7 68 aa8.95□□□□□ -0.98
TCOF1-207ENST00000504761 TENM3Q9P273 2699 aa8.95□□□□□ -0.98
TCOF1-207ENST00000504761 KRTAP26-1Q6PEX3 210 aa8.94□□□□□ -0.98
TCOF1-207ENST00000504761 K7EQZ3 153 aa8.93□□□□□ -0.98
TCOF1-207ENST00000504761 LIMD2Q9BT23 127 aa8.93□□□□□ -0.98
TCOF1-207ENST00000504761 FAM229AH3BQW9 127 aa8.92□□□□□ -0.98
TCOF1-207ENST00000504761 hDV103S1A0JD37 113 aa8.92□□□□□ -0.98
TCOF1-207ENST00000504761 A0A1B0GW54 56 aa8.91□□□□□ -0.98
TCOF1-207ENST00000504761 A0A1W2PNM2 257 aa8.9□□□□□ -0.98
TCOF1-207ENST00000504761 BSNQ9UPA5 3926 aa8.89□□□□□ -0.99
TCOF1-207ENST00000504761 IGLV5-37A0A075B6J1 123 aa8.89□□□□□ -0.99
TCOF1-207ENST00000504761 IGLV7-43P04211 117 aa8.88□□□□□ -0.99
TCOF1-207ENST00000504761 C1orf64Q8NEQ6 169 aa8.88□□□□□ -0.99
TCOF1-207ENST00000504761 IGKV2D-30A0A075B6S6 120 aa8.86□□□□□ -0.99
TCOF1-207ENST00000504761 IGKV2-30P06310 120 aa8.86□□□□□ -0.99
TCOF1-207ENST00000504761 PKD1L1Q8TDX9 2849 aa8.86□□□□□ -0.99
TCOF1-207ENST00000504761 SPRR4Q96PI1 79 aa8.85□□□□□ -0.99
TCOF1-207ENST00000504761 ATP5EP56381 51 aaPredicted RBP8.83□□□□□ -1
TCOF1-207ENST00000504761 BRK1Q8WUW1 75 aa8.83□□□□□ -1
TCOF1-207ENST00000504761 A8MWP4 228 aa8.81□□□□□ -1
TCOF1-207ENST00000504761 IGLV5-48A0A075B6I7 105 aa8.8□□□□□ -1
TCOF1-207ENST00000504761 LINC00313P59037 77 aa8.8□□□□□ -1
TCOF1-207ENST00000504761 SEC61GP60059 68 aa8.8□□□□□ -1
TCOF1-207ENST00000504761 OBSCN-AS1Q96MR7 158 aa8.8□□□□□ -1
TCOF1-207ENST00000504761 SPINK1P00995 79 aa8.79□□□□□ -1
TCOF1-207ENST00000504761 LINC00336Q6ZUF6 198 aa8.78□□□□□ -1
TCOF1-207ENST00000504761 SSBP3-AS1Q7Z2R9 100 aa8.77□□□□□ -1.01
TCOF1-207ENST00000504761 PRR15Q8IV56 129 aa8.76□□□□□ -1.01
TCOF1-207ENST00000504761 TRAV22A0A0B4J277 110 aa8.76□□□□□ -1.01
TCOF1-207ENST00000504761 SERP1Q9Y6X1 66 aa8.76□□□□□ -1.01
TCOF1-207ENST00000504761 PANO1I0J062 215 aa8.75□□□□□ -1.01
TCOF1-207ENST00000504761 SPRR1AP35321 89 aa8.75□□□□□ -1.01
TCOF1-207ENST00000504761 DMBT1Q9UGM3 2413 aaPredicted RBP8.75□□□□□ -1.01
TCOF1-207ENST00000504761 LINC01600Q96MT4 127 aa8.75□□□□□ -1.01
TCOF1-207ENST00000504761 Q96NJ1 140 aa8.75□□□□□ -1.01
TCOF1-207ENST00000504761 SPTSSBQ8NFR3 76 aa8.74□□□□□ -1.01
TCOF1-207ENST00000504761 DSCR10P59022 87 aa8.74□□□□□ -1.01
TCOF1-207ENST00000504761 SMIM26A0A096LP01 95 aa8.74□□□□□ -1.01
TCOF1-207ENST00000504761 TP53AIP1Q9HCN2 124 aa8.74□□□□□ -1.01
TCOF1-207ENST00000504761 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
TCOF1-207ENST00000504761 KRTAP10-2P60368 255 aa8.72□□□□□ -1.01
TCOF1-207ENST00000504761 MRPL34Q9BQ48 92 aaKnown RBP8.71□□□□□ -1.02
TCOF1-207ENST00000504761 C8orf17Q9NRJ1 99 aa8.7□□□□□ -1.02
TCOF1-207ENST00000504761 PLAC8Q9NZF1 115 aa8.7□□□□□ -1.02
TCOF1-207ENST00000504761 PSPHP1O15172 72 aa8.69□□□□□ -1.02
TCOF1-207ENST00000504761 A0A1B0GVX0 72 aa8.68□□□□□ -1.02
TCOF1-207ENST00000504761 A6NED7 52 aa8.68□□□□□ -1.02
TCOF1-207ENST00000504761 C9orf92A6NGG3 77 aa8.67□□□□□ -1.02
TCOF1-207ENST00000504761 A0A0U1RQV1 116 aa8.67□□□□□ -1.02
TCOF1-207ENST00000504761 V9GYY9 64 aa8.65□□□□□ -1.02
TCOF1-207ENST00000504761 KRTAP10-1P60331 282 aa8.65□□□□□ -1.03
TCOF1-207ENST00000504761 PRR15LQ9BU68 103 aa8.65□□□□□ -1.03
TCOF1-207ENST00000504761 PRR26Q8N8Z3 221 aa8.64□□□□□ -1.03
TCOF1-207ENST00000504761 Q6ZR54 194 aa8.64□□□□□ -1.03
TCOF1-207ENST00000504761 TENM2Q9NT68 2774 aa8.64□□□□□ -1.03
TCOF1-207ENST00000504761 C8orf87E5RJ46 101 aa8.61□□□□□ -1.03
TCOF1-207ENST00000504761 C7orf65Q6ZTY9 151 aa8.61□□□□□ -1.03
TCOF1-207ENST00000504761 TGP01266 2768 aa8.61□□□□□ -1.03
TCOF1-207ENST00000504761 FLG2Q5D862 2391 aaPredicted RBP8.6□□□□□ -1.03
TCOF1-207ENST00000504761 J3QL48 77 aa8.58□□□□□ -1.04
TCOF1-207ENST00000504761 SPAG11AQ6PDA7 123 aa8.58□□□□□ -1.04
TCOF1-207ENST00000504761 KRTAP4-16G5E9R7 235 aaPredicted RBP8.57□□□□□ -1.04
TCOF1-207ENST00000504761 H3BPC8 53 aa8.57□□□□□ -1.04
TCOF1-207ENST00000504761 Q6ZRN7 208 aaPredicted RBP8.57□□□□□ -1.04
TCOF1-207ENST00000504761 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
TCOF1-207ENST00000504761 LCE6AA0A183 80 aa8.57□□□□□ -1.04
TCOF1-207ENST00000504761 KRTAP7-1Q8IUC3 87 aa8.56□□□□□ -1.04
TCOF1-207ENST00000504761 KLKP1Q107X0 134 aa8.56□□□□□ -1.04
TCOF1-207ENST00000504761 TRRAPQ9Y4A5 3859 aa8.55□□□□□ -1.04
TCOF1-207ENST00000504761 LOC101927531A0A1B0GV80 90 aa8.54□□□□□ -1.04
TCOF1-207ENST00000504761 ATP11AUNQ6ZP68 121 aa8.53□□□□□ -1.04
TCOF1-207ENST00000504761 H7BZZ5 65 aa8.53□□□□□ -1.04
TCOF1-207ENST00000504761 ACYP2P14621 99 aa8.52□□□□□ -1.05
TCOF1-207ENST00000504761 SPRR1BP22528 89 aa8.52□□□□□ -1.05
TCOF1-207ENST00000504761 OCR1Q9BZK8 76 aa8.5□□□□□ -1.05
TCOF1-207ENST00000504761 VPS13CQ709C8 3753 aa8.48□□□□□ -1.05
TCOF1-207ENST00000504761 C4orf26Q17RF5 130 aa8.48□□□□□ -1.05
TCOF1-207ENST00000504761 IGLV8-61A0A075B6I0 122 aa8.46□□□□□ -1.05
TCOF1-207ENST00000504761 RPS28P62857 69 aaKnown RBP8.46□□□□□ -1.06
TCOF1-207ENST00000504761 LINC00472Q9H8W2 130 aa8.44□□□□□ -1.06
TCOF1-207ENST00000504761 CD164Q04900 197 aa8.44□□□□□ -1.06
TCOF1-207ENST00000504761 FAM229BQ4G0N7 80 aa8.44□□□□□ -1.06
TCOF1-207ENST00000504761 SVIPQ8NHG7 77 aa8.44□□□□□ -1.06
TCOF1-207ENST00000504761 ANK3Q12955 4377 aaKnown RBP8.43□□□□□ -1.06
TCOF1-207ENST00000504761 COA5Q86WW8 74 aa8.42□□□□□ -1.06
TCOF1-207ENST00000504761 K7ERS5 55 aa8.41□□□□□ -1.06
TCOF1-207ENST00000504761 MMP24-AS1A0A0U1RRL7 71 aa8.41□□□□□ -1.06
TCOF1-207ENST00000504761 A0A1B0GU69 56 aa8.4□□□□□ -1.06
TCOF1-207ENST00000504761 A0A087X002 238 aa8.4□□□□□ -1.07
TCOF1-207ENST00000504761 CYSTM1Q9H1C7 97 aa8.39□□□□□ -1.07
TCOF1-207ENST00000504761 Q8N1X5 172 aa8.37□□□□□ -1.07
TCOF1-207ENST00000504761 KRTAP21-3Q3LHN1 58 aa8.37□□□□□ -1.07
TCOF1-207ENST00000504761 Q5VSD8 79 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms