RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 MUC4Q99102 2169 aa2.48□□□□□ -2.01
HMGB1P21-201ENST00000502313 A0A1W2PNM2 257 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 IGIPA6NJ69 53 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 IBA57-AS1B1ANH7 110 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 SMIM13P0DJ93 91 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 IGLC3P0DOY3 106 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 DEFB130BP0DP73 79 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 DEFB130AP0DP74 79 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 COX8AP10176 69 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 LINC00315P59091 139 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 DEFB1P60022 68 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 ASB16-AS1Q495Z4 193 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 PRR9Q5T870 116 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 SPANXDQ9BXN6 97 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 PRO1933Q9H354 126 aa2.47□□□□□ -2.01
HMGB1P21-201ENST00000502313 DNAH5Q8TE73 4624 aa2.46□□□□□ -2.01
HMGB1P21-201ENST00000502313 MYMXA0A1B0GTQ4 84 aa2.46□□□□□ -2.02
HMGB1P21-201ENST00000502313 H3BNG1 76 aa2.46□□□□□ -2.02
HMGB1P21-201ENST00000502313 KRTAP1-4P0C5Y4 121 aa2.46□□□□□ -2.02
HMGB1P21-201ENST00000502313 BAALC-AS2P0C853 105 aa2.46□□□□□ -2.02
HMGB1P21-201ENST00000502313 PRB4P10163 310 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P21-201ENST00000502313 NPC2P61916 151 aa2.46□□□□□ -2.02
HMGB1P21-201ENST00000502313 TMEM170BQ5T4T1 132 aa2.46□□□□□ -2.02
HMGB1P21-201ENST00000502313 CASC2Q6XLA1 102 aa2.46□□□□□ -2.02
HMGB1P21-201ENST00000502313 RPL39LQ96EH5 51 aaKnown RBP2.46□□□□□ -2.02
HMGB1P21-201ENST00000502313 HIGD1BQ9P298 99 aa2.46□□□□□ -2.02
HMGB1P21-201ENST00000502313 LRP1BQ9NZR2 4599 aa2.45□□□□□ -2.02
HMGB1P21-201ENST00000502313 IGKV2D-24A0A075B6R9 120 aa2.45□□□□□ -2.02
HMGB1P21-201ENST00000502313 TRBV6-8A0A0A6YYG3 113 aa2.45□□□□□ -2.02
HMGB1P21-201ENST00000502313 PRB2P02812 416 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P21-201ENST00000502313 P0C880 135 aa2.45□□□□□ -2.02
HMGB1P21-201ENST00000502313 KRTAP10-12P60413 245 aa2.45□□□□□ -2.02
HMGB1P21-201ENST00000502313 MOBPQ13875 183 aa2.45□□□□□ -2.02
HMGB1P21-201ENST00000502313 TMEM254Q8TBM7 123 aa2.45□□□□□ -2.02
HMGB1P21-201ENST00000502313 HERC2O95714 4834 aa2.45□□□□□ -2.02
HMGB1P21-201ENST00000502313 IGLV10-54A0A075B6I4 117 aa2.44□□□□□ -2.02
HMGB1P21-201ENST00000502313 COX6CP09669 75 aa2.44□□□□□ -2.02
HMGB1P21-201ENST00000502313 UBE2D3P61077 147 aa2.44□□□□□ -2.02
HMGB1P21-201ENST00000502313 UBE2D2P62837 147 aa2.44□□□□□ -2.02
HMGB1P21-201ENST00000502313 S100A7L2Q5SY68 101 aa2.44□□□□□ -2.02
HMGB1P21-201ENST00000502313 Q6ZTI0 123 aa2.44□□□□□ -2.02
HMGB1P21-201ENST00000502313 C9orf163Q8N9P6 203 aa2.44□□□□□ -2.02
HMGB1P21-201ENST00000502313 AMELXQ99217 191 aa2.44□□□□□ -2.02
HMGB1P21-201ENST00000502313 CDC42SE2Q9NRR3 84 aa2.44□□□□□ -2.02
HMGB1P21-201ENST00000502313 MRPL35Q9NZE8 188 aaKnown RBP2.44□□□□□ -2.02
HMGB1P21-201ENST00000502313 APOBP04114 4563 aaKnown RBP2.43□□□□□ -2.02
HMGB1P21-201ENST00000502313 TRAV10A0A0B4J240 114 aa2.43□□□□□ -2.02
HMGB1P21-201ENST00000502313 MT-ATP8P03928 68 aa2.43□□□□□ -2.02
HMGB1P21-201ENST00000502313 CCL18P55774 89 aa2.43□□□□□ -2.02
HMGB1P21-201ENST00000502313 KRTAP11-1Q8IUC1 163 aa2.43□□□□□ -2.02
HMGB1P21-201ENST00000502313 C15orf53Q8NAA6 179 aa2.43□□□□□ -2.02
HMGB1P21-201ENST00000502313 Q9BRP9 147 aa2.43□□□□□ -2.02
HMGB1P21-201ENST00000502313 KIAA1109Q2LD37 5005 aa2.43□□□□□ -2.02
HMGB1P21-201ENST00000502313 DNAH8Q96JB1 4490 aa2.43□□□□□ -2.02
HMGB1P21-201ENST00000502313 RYR1P21817 5038 aa2.42□□□□□ -2.02
HMGB1P21-201ENST00000502313 HSPG2P98160 4391 aa2.42□□□□□ -2.02
HMGB1P21-201ENST00000502313 A0A087WSZ3 146 aa2.42□□□□□ -2.02
HMGB1P21-201ENST00000502313 ZNF815PA8K554 130 aa2.42□□□□□ -2.02
HMGB1P21-201ENST00000502313 ERC2-IT1O76042 136 aa2.42□□□□□ -2.02
HMGB1P21-201ENST00000502313 RPL39P62891 51 aaKnown RBP2.42□□□□□ -2.02
HMGB1P21-201ENST00000502313 COX17Q14061 63 aa2.42□□□□□ -2.02
HMGB1P21-201ENST00000502313 DEFB135Q30KP9 77 aa2.42□□□□□ -2.02
HMGB1P21-201ENST00000502313 LELP1Q5T871 98 aa2.42□□□□□ -2.02
HMGB1P21-201ENST00000502313 LINC00167Q96N53 147 aa2.42□□□□□ -2.02
HMGB1P21-201ENST00000502313 PRO2289Q9P1D8 64 aa2.42□□□□□ -2.02
HMGB1P21-201ENST00000502313 UBE2D4Q9Y2X8 147 aa2.42□□□□□ -2.02
HMGB1P21-201ENST00000502313 PCLOQ9Y6V0 5065 aa2.41□□□□□ -2.02
HMGB1P21-201ENST00000502313 HTN3P15516 51 aa2.41□□□□□ -2.02
HMGB1P21-201ENST00000502313 MIR22HGQ0VDD5 57 aa2.41□□□□□ -2.02
HMGB1P21-201ENST00000502313 BVES-AS1Q5T3Y7 98 aa2.41□□□□□ -2.02
HMGB1P21-201ENST00000502313 LYPD5Q6UWN5 251 aa2.41□□□□□ -2.02
HMGB1P21-201ENST00000502313 SBSPONQ8IVN8 264 aa2.41□□□□□ -2.02
HMGB1P21-201ENST00000502313 NDUFA12Q9UI09 145 aa2.41□□□□□ -2.02
HMGB1P21-201ENST00000502313 PSORS1C2Q9UIG4 136 aa2.41□□□□□ -2.02
HMGB1P21-201ENST00000502313 FAT1Q14517 4588 aa2.4□□□□□ -2.02
HMGB1P21-201ENST00000502313 IGLV4-60A0A075B6I1 120 aa2.4□□□□□ -2.03
HMGB1P21-201ENST00000502313 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P21-201ENST00000502313 DEFB131BA0A096LNP1 70 aa2.4□□□□□ -2.03
HMGB1P21-201ENST00000502313 TRAV13-2A0A0B4J235 113 aa2.4□□□□□ -2.03
HMGB1P21-201ENST00000502313 IGKV2-29A2NJV5 120 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P21-201ENST00000502313 F8W1H4 67 aa2.4□□□□□ -2.03
HMGB1P21-201ENST00000502313 RTL8CO15255 209 aa2.4□□□□□ -2.03
HMGB1P21-201ENST00000502313 ANGP03950 147 aaKnown RBP2.4□□□□□ -2.03
HMGB1P21-201ENST00000502313 UBE2D1P51668 147 aa2.4□□□□□ -2.03
HMGB1P21-201ENST00000502313 RBM3P98179 157 aaKnown RBP2.4□□□□□ -2.03
HMGB1P21-201ENST00000502313 PRO1854Q9UHT4 67 aa2.4□□□□□ -2.03
HMGB1P21-201ENST00000502313 A0A0J9YY99 117 aa2.39□□□□□ -2.03
HMGB1P21-201ENST00000502313 LINC00959A0A1B0GUT2 108 aa2.39□□□□□ -2.03
HMGB1P21-201ENST00000502313 A0A1B0GVY2 172 aa2.39□□□□□ -2.03
HMGB1P21-201ENST00000502313 H0YGX0 51 aa2.39□□□□□ -2.03
HMGB1P21-201ENST00000502313 LINC00158P58513 81 aa2.39□□□□□ -2.03
HMGB1P21-201ENST00000502313 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
HMGB1P21-201ENST00000502313 COX7B2Q8TF08 81 aa2.39□□□□□ -2.03
HMGB1P21-201ENST00000502313 WFDC10AQ9H1F0 79 aa2.39□□□□□ -2.03
HMGB1P21-201ENST00000502313 CDKN2A-AS1Q9UH64 79 aa2.39□□□□□ -2.03
HMGB1P21-201ENST00000502313 ABCA13Q86UQ4 5058 aa2.38□□□□□ -2.03
HMGB1P21-201ENST00000502313 A0A0G2JQZ4 141 aa2.38□□□□□ -2.03
HMGB1P21-201ENST00000502313 LRCOL1A6NCL2 159 aa2.38□□□□□ -2.03
HMGB1P21-201ENST00000502313 NDUFA1O15239 70 aa2.38□□□□□ -2.03
HMGB1P21-201ENST00000502313 DEFB4AO15263 64 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms