RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 CELSR3Q9NYQ7 3312 aa3.1□□□□□ -1.91
NEAT1-202ENST00000501122 TNRC18O15417 2968 aaPredicted RBP3.1□□□□□ -1.91
NEAT1-202ENST00000501122 WDR90Q96KV7 1748 aa3.1□□□□□ -1.91
NEAT1-202ENST00000501122 C20orf166-AS1Q96NR2 134 aa3.1□□□□□ -1.91
NEAT1-202ENST00000501122 NRXN2Q9P2S2 1712 aa3.09□□□□□ -1.91
NEAT1-202ENST00000501122 IGLV5-48A0A075B6I7 105 aa3.09□□□□□ -1.91
NEAT1-202ENST00000501122 IGLV5-37A0A075B6J1 123 aa3.09□□□□□ -1.92
NEAT1-202ENST00000501122 ADAMTSL1Q8N6G6 1762 aa3.09□□□□□ -1.92
NEAT1-202ENST00000501122 Q6ZR54 194 aa3.08□□□□□ -1.92
NEAT1-202ENST00000501122 DCHS2Q6V1P9 2916 aa3.08□□□□□ -1.92
NEAT1-202ENST00000501122 FLNBO75369 2602 aaKnown RBP3.08□□□□□ -1.92
NEAT1-202ENST00000501122 LAMA1P25391 3075 aa3.08□□□□□ -1.92
NEAT1-202ENST00000501122 A0A1W2PNU3 283 aaPredicted RBP3.07□□□□□ -1.92
NEAT1-202ENST00000501122 C15orf56Q8N910 161 aa3.07□□□□□ -1.92
NEAT1-202ENST00000501122 A8MU10 97 aa3.07□□□□□ -1.92
NEAT1-202ENST00000501122 IGLV1-50A0A075B6I6 118 aa3.07□□□□□ -1.92
NEAT1-202ENST00000501122 PLA2G2CQ5R387 149 aa3.07□□□□□ -1.92
NEAT1-202ENST00000501122 SPRR4Q96PI1 79 aa3.07□□□□□ -1.92
NEAT1-202ENST00000501122 CPAMD8Q8IZJ3 1885 aa3.07□□□□□ -1.92
NEAT1-202ENST00000501122 Q8N1X5 172 aa3.06□□□□□ -1.92
NEAT1-202ENST00000501122 RAI1Q7Z5J4 1906 aaPredicted RBP3.06□□□□□ -1.92
NEAT1-202ENST00000501122 SPACA4Q8TDM5 124 aa3.06□□□□□ -1.92
NEAT1-202ENST00000501122 ZCCHC13Q8WW36 166 aaKnown RBP3.06□□□□□ -1.92
NEAT1-202ENST00000501122 EP400Q96L91 3159 aa3.06□□□□□ -1.92
NEAT1-202ENST00000501122 J3QL48 77 aa3.06□□□□□ -1.92
NEAT1-202ENST00000501122 COL5A3P25940 1745 aaPredicted RBP3.06□□□□□ -1.92
NEAT1-202ENST00000501122 CNBPP62633 177 aaKnown RBP3.06□□□□□ -1.92
NEAT1-202ENST00000501122 Q96NJ1 140 aa3.06□□□□□ -1.92
NEAT1-202ENST00000501122 ANAPC11Q9NYG5 84 aa3.05□□□□□ -1.92
NEAT1-202ENST00000501122 A0A096LNT2 108 aa3.05□□□□□ -1.92
NEAT1-202ENST00000501122 LINC00483Q53H64 154 aa3.05□□□□□ -1.92
NEAT1-202ENST00000501122 CDH23Q9H251 3354 aa3.05□□□□□ -1.92
NEAT1-202ENST00000501122 FAM168BA1KXE4 195 aa3.04□□□□□ -1.92
NEAT1-202ENST00000501122 NF1P21359 2839 aa3.04□□□□□ -1.92
NEAT1-202ENST00000501122 HIVEP1P15822 2718 aa3.04□□□□□ -1.92
NEAT1-202ENST00000501122 NOTCH2NLQ7Z3S9 236 aa3.03□□□□□ -1.92
NEAT1-202ENST00000501122 UTRNP46939 3433 aa3.03□□□□□ -1.92
NEAT1-202ENST00000501122 ITPR3Q14573 2671 aa3.03□□□□□ -1.92
NEAT1-202ENST00000501122 LY6G6CO95867 125 aa3.03□□□□□ -1.92
NEAT1-202ENST00000501122 J3QKU1 62 aa3.02□□□□□ -1.93
NEAT1-202ENST00000501122 RPL37P61927 97 aaKnown RBP3.02□□□□□ -1.93
NEAT1-202ENST00000501122 SETXQ7Z333 2677 aaKnown RBP3.01□□□□□ -1.93
NEAT1-202ENST00000501122 TNS1Q9HBL0 1735 aaKnown RBP3.01□□□□□ -1.93
NEAT1-202ENST00000501122 IGSF10Q6WRI0 2623 aa3.01□□□□□ -1.93
NEAT1-202ENST00000501122 TNP2Q05952 138 aa3.01□□□□□ -1.93
NEAT1-202ENST00000501122 A8MUU9 505 aa3□□□□□ -1.93
NEAT1-202ENST00000501122 CASC10Q5T4H9 136 aa3□□□□□ -1.93
NEAT1-202ENST00000501122 DCHS1Q96JQ0 3298 aa3□□□□□ -1.93
NEAT1-202ENST00000501122 LAMA3Q16787 3333 aa2.99□□□□□ -1.93
NEAT1-202ENST00000501122 COL4A4P53420 1690 aaPredicted RBP2.99□□□□□ -1.93
NEAT1-202ENST00000501122 LINC00612Q8N6U2 182 aa2.99□□□□□ -1.93
NEAT1-202ENST00000501122 EYSQ5T1H1 3165 aa2.99□□□□□ -1.93
NEAT1-202ENST00000501122 FBN2P35556 2912 aa2.98□□□□□ -1.93
NEAT1-202ENST00000501122 H1FX-AS1Q4G0G2 97 aa2.98□□□□□ -1.93
NEAT1-202ENST00000501122 APCP25054 2843 aa2.98□□□□□ -1.93
NEAT1-202ENST00000501122 LTBP1Q14766 1721 aa2.97□□□□□ -1.93
NEAT1-202ENST00000501122 XIRP2A4UGR9 3374 aa2.97□□□□□ -1.93
NEAT1-202ENST00000501122 CELSR1Q9NYQ6 3014 aa2.97□□□□□ -1.93
NEAT1-202ENST00000501122 C9orf92A6NGG3 77 aa2.97□□□□□ -1.93
NEAT1-202ENST00000501122 ZNF861PO60384 105 aa2.97□□□□□ -1.93
NEAT1-202ENST00000501122 PANO1I0J062 215 aa2.97□□□□□ -1.93
NEAT1-202ENST00000501122 CFAP46Q8IYW2 2715 aa2.97□□□□□ -1.93
NEAT1-202ENST00000501122 LCE6AA0A183 80 aa2.97□□□□□ -1.93
NEAT1-202ENST00000501122 LINC00472Q9H8W2 130 aa2.96□□□□□ -1.94
NEAT1-202ENST00000501122 LINC00304Q8N9R0 145 aa2.96□□□□□ -1.94
NEAT1-202ENST00000501122 KLK9Q2XQG4 91 aa2.96□□□□□ -1.94
NEAT1-202ENST00000501122 PDZD2O15018 2839 aa2.96□□□□□ -1.94
NEAT1-202ENST00000501122 PLAC4Q8WY50 150 aa2.96□□□□□ -1.94
NEAT1-202ENST00000501122 ZANQ9Y493 2812 aa2.96□□□□□ -1.94
NEAT1-202ENST00000501122 PRR34Q9NV39 138 aa2.95□□□□□ -1.94
NEAT1-202ENST00000501122 IGLV5-52A0A0A0MRZ9 124 aa2.95□□□□□ -1.94
NEAT1-202ENST00000501122 MMP24-AS1A0A0U1RRL7 71 aa2.95□□□□□ -1.94
NEAT1-202ENST00000501122 KRTAP11-1Q8IUC1 163 aa2.95□□□□□ -1.94
NEAT1-202ENST00000501122 PSORS1C2Q9UIG4 136 aa2.95□□□□□ -1.94
NEAT1-202ENST00000501122 H3BNG1 76 aa2.94□□□□□ -1.94
NEAT1-202ENST00000501122 KMT2BQ9UMN6 2715 aaPredicted RBP2.94□□□□□ -1.94
NEAT1-202ENST00000501122 COX6B2Q6YFQ2 88 aa2.94□□□□□ -1.94
NEAT1-202ENST00000501122 TYMSOSQ8TAI1 123 aa2.94□□□□□ -1.94
NEAT1-202ENST00000501122 KRTAP29-1A8MX34 341 aaPredicted RBP2.93□□□□□ -1.94
NEAT1-202ENST00000501122 Q5W150 140 aa2.92□□□□□ -1.94
NEAT1-202ENST00000501122 OTOGQ6ZRI0 2925 aa2.92□□□□□ -1.94
NEAT1-202ENST00000501122 KRTAP4-16G5E9R7 235 aaPredicted RBP2.92□□□□□ -1.94
NEAT1-202ENST00000501122 NIPBLQ6KC79 2804 aaeCLIP2.9□□□□□ -1.946e-7■□□□□ 8.7
NEAT1-202ENST00000501122 SMR3AQ99954 134 aa2.9□□□□□ -1.94
NEAT1-202ENST00000501122 GIG44P09565 113 aaPredicted RBP2.9□□□□□ -1.94
NEAT1-202ENST00000501122 Q8NDZ9 215 aa2.9□□□□□ -1.95
NEAT1-202ENST00000501122 K7EIL1 84 aa2.9□□□□□ -1.95
NEAT1-202ENST00000501122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.89□□□□□ -1.95
NEAT1-202ENST00000501122 VCANP13611 3396 aa2.88□□□□□ -1.95
NEAT1-202ENST00000501122 COL27A1Q8IZC6 1860 aaPredicted RBP2.88□□□□□ -1.95
NEAT1-202ENST00000501122 LOC400499M0QZD8 3231 aa2.87□□□□□ -1.95
NEAT1-202ENST00000501122 SPEGQ15772 3267 aa2.87□□□□□ -1.95
NEAT1-202ENST00000501122 LTBP2Q14767 1821 aa2.87□□□□□ -1.95
NEAT1-202ENST00000501122 COL7A1Q02388 2944 aa2.85□□□□□ -1.95
NEAT1-202ENST00000501122 TENM3Q9P273 2699 aa2.85□□□□□ -1.95
NEAT1-202ENST00000501122 KRTAP26-1Q6PEX3 210 aa2.84□□□□□ -1.95
NEAT1-202ENST00000501122 SPRR1AP35321 89 aa2.84□□□□□ -1.95
NEAT1-202ENST00000501122 NBDYA0A0U1RRE5 68 aa2.83□□□□□ -1.96
NEAT1-202ENST00000501122 KRTAP10-9P60411 292 aa2.83□□□□□ -1.96
NEAT1-202ENST00000501122 PLAC8Q9NZF1 115 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms