RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 IGLV9-49A0A0B4J1Y8 123 aa6.49□□□□□ -1.37
ERCC8-208ENST00000497892 SPAG11AQ6PDA7 123 aa6.49□□□□□ -1.37
ERCC8-208ENST00000497892 TAL2Q16559 108 aa6.48□□□□□ -1.37
ERCC8-208ENST00000497892 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
ERCC8-208ENST00000497892 SSBP3-AS1Q7Z2R9 100 aa6.47□□□□□ -1.37
ERCC8-208ENST00000497892 NHP2Q9NX24 153 aaKnown RBP6.47□□□□□ -1.37
ERCC8-208ENST00000497892 IGLV5-48A0A075B6I7 105 aa6.46□□□□□ -1.38
ERCC8-208ENST00000497892 A0A0B4J2C4 111 aa6.46□□□□□ -1.38
ERCC8-208ENST00000497892 CFC1BP0CG36 223 aa6.46□□□□□ -1.38
ERCC8-208ENST00000497892 CFC1P0CG37 223 aa6.46□□□□□ -1.38
ERCC8-208ENST00000497892 VAMP3Q15836 100 aa6.46□□□□□ -1.38
ERCC8-208ENST00000497892 PRR4Q16378 134 aa6.46□□□□□ -1.38
ERCC8-208ENST00000497892 C9orf153Q5TBE3 101 aa6.46□□□□□ -1.38
ERCC8-208ENST00000497892 CEND1Q8N111 149 aa6.45□□□□□ -1.38
ERCC8-208ENST00000497892 LPAP08519 4548 aa6.44□□□□□ -1.38
ERCC8-208ENST00000497892 TEX49A0A1B0GTD5 131 aa6.44□□□□□ -1.38
ERCC8-208ENST00000497892 SPINK1P00995 79 aa6.44□□□□□ -1.38
ERCC8-208ENST00000497892 LINC01547P58512 204 aaPredicted RBP6.44□□□□□ -1.38
ERCC8-208ENST00000497892 LINC00575Q6W349 94 aa6.44□□□□□ -1.38
ERCC8-208ENST00000497892 DEFB105AQ8NG35 78 aa6.44□□□□□ -1.38
ERCC8-208ENST00000497892 RAB37Q96AX2 223 aa6.44□□□□□ -1.38
ERCC8-208ENST00000497892 RETNLBQ9BQ08 111 aa6.44□□□□□ -1.38
ERCC8-208ENST00000497892 SLC25A20O43772 301 aa6.43□□□□□ -1.38
ERCC8-208ENST00000497892 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
ERCC8-208ENST00000497892 BVES-AS1Q5T3Y7 98 aa6.43□□□□□ -1.38
ERCC8-208ENST00000497892 UQCR10Q9UDW1 63 aa6.43□□□□□ -1.38
ERCC8-208ENST00000497892 LAMTOR3Q9UHA4 124 aa6.43□□□□□ -1.38
ERCC8-208ENST00000497892 H7C2G1 150 aa6.42□□□□□ -1.38
ERCC8-208ENST00000497892 FXYD2P54710 66 aa6.42□□□□□ -1.38
ERCC8-208ENST00000497892 HSD52Q0P140 79 aa6.42□□□□□ -1.38
ERCC8-208ENST00000497892 Q1RN00 199 aa6.42□□□□□ -1.38
ERCC8-208ENST00000497892 SMIM29Q86T20 159 aa6.41□□□□□ -1.38
ERCC8-208ENST00000497892 hADV29S1A0JD25 119 aa6.4□□□□□ -1.38
ERCC8-208ENST00000497892 Q8N377 158 aa6.4□□□□□ -1.38
ERCC8-208ENST00000497892 PRO1854Q9UHT4 67 aa6.4□□□□□ -1.38
ERCC8-208ENST00000497892 Q6ZQY7 126 aa6.39□□□□□ -1.39
ERCC8-208ENST00000497892 SMIM6P0DI80 62 aa6.38□□□□□ -1.39
ERCC8-208ENST00000497892 IGLV7-46A0A075B6I9 117 aa6.37□□□□□ -1.39
ERCC8-208ENST00000497892 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.37□□□□□ -1.39
ERCC8-208ENST00000497892 FP248Q71RG6 208 aaPredicted RBP6.37□□□□□ -1.39
ERCC8-208ENST00000497892 PRO1933Q9H354 126 aa6.37□□□□□ -1.39
ERCC8-208ENST00000497892 H0YGX0 51 aa6.36□□□□□ -1.39
ERCC8-208ENST00000497892 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
ERCC8-208ENST00000497892 K7ERJ3 54 aa6.35□□□□□ -1.39
ERCC8-208ENST00000497892 CD164Q04900 197 aa6.35□□□□□ -1.39
ERCC8-208ENST00000497892 PPDPFLQ8WWR9 84 aa6.35□□□□□ -1.39
ERCC8-208ENST00000497892 FAM218AQ96MZ4 157 aa6.35□□□□□ -1.39
ERCC8-208ENST00000497892 F8WEM9 126 aa6.34□□□□□ -1.39
ERCC8-208ENST00000497892 TRIAP1O43715 76 aa6.33□□□□□ -1.4
ERCC8-208ENST00000497892 HRCT1Q6UXD1 115 aa6.33□□□□□ -1.4
ERCC8-208ENST00000497892 LIMD2Q9BT23 127 aa6.33□□□□□ -1.4
ERCC8-208ENST00000497892 A0A1B0GX51 115 aa6.32□□□□□ -1.4
ERCC8-208ENST00000497892 SNCGO76070 127 aa6.32□□□□□ -1.4
ERCC8-208ENST00000497892 OCIAD2Q56VL3 154 aa6.32□□□□□ -1.4
ERCC8-208ENST00000497892 IGLV8-61A0A075B6I0 122 aa6.31□□□□□ -1.4
ERCC8-208ENST00000497892 A0A0G2JQZ4 141 aa6.31□□□□□ -1.4
ERCC8-208ENST00000497892 RNF213Q63HN8 5207 aa6.3□□□□□ -1.4
ERCC8-208ENST00000497892 LOC105371267A0A1B0GV96 52 aa6.3□□□□□ -1.4
ERCC8-208ENST00000497892 KRTAP13-3Q3SY46 172 aa6.3□□□□□ -1.4
ERCC8-208ENST00000497892 PSMB2P49721 201 aa6.29□□□□□ -1.4
ERCC8-208ENST00000497892 Q5XG85 94 aa6.29□□□□□ -1.4
ERCC8-208ENST00000497892 Q6JHZ5 121 aa6.29□□□□□ -1.4
ERCC8-208ENST00000497892 CLEC2BQ92478 149 aa6.29□□□□□ -1.4
ERCC8-208ENST00000497892 SNHG12Q9BXW3 62 aa6.29□□□□□ -1.4
ERCC8-208ENST00000497892 M0R143 59 aa6.27□□□□□ -1.41
ERCC8-208ENST00000497892 COX6CP09669 75 aa6.27□□□□□ -1.41
ERCC8-208ENST00000497892 IGFL1Q6UW32 110 aa6.27□□□□□ -1.41
ERCC8-208ENST00000497892 TSTD3H0UI37 97 aa6.26□□□□□ -1.41
ERCC8-208ENST00000497892 H3BUT2 72 aa6.25□□□□□ -1.41
ERCC8-208ENST00000497892 DNAL4O96015 105 aa6.25□□□□□ -1.41
ERCC8-208ENST00000497892 NDUFV3P56181 108 aaKnown RBP6.25□□□□□ -1.41
ERCC8-208ENST00000497892 TRBV7-7A0A0K0K1E9 115 aa6.23□□□□□ -1.41
ERCC8-208ENST00000497892 TCL1BO95988 128 aa6.23□□□□□ -1.41
ERCC8-208ENST00000497892 ORMDL1Q9P0S3 153 aa6.23□□□□□ -1.41
ERCC8-208ENST00000497892 FABP2P12104 132 aa6.22□□□□□ -1.41
ERCC8-208ENST00000497892 C1orf195Q5TG92 126 aa6.22□□□□□ -1.41
ERCC8-208ENST00000497892 H3BQ85 93 aa6.21□□□□□ -1.42
ERCC8-208ENST00000497892 LST1O00453 97 aa6.21□□□□□ -1.42
ERCC8-208ENST00000497892 TRACP01848 142 aa6.21□□□□□ -1.42
ERCC8-208ENST00000497892 ASB16-AS1Q495Z4 193 aa6.21□□□□□ -1.42
ERCC8-208ENST00000497892 MUC2Q02817 5179 aa6.2□□□□□ -1.42
ERCC8-208ENST00000497892 H3BMG7 143 aa6.2□□□□□ -1.42
ERCC8-208ENST00000497892 SCGB1C2P0DMR2 95 aa6.2□□□□□ -1.42
ERCC8-208ENST00000497892 Q6Q795 121 aa6.2□□□□□ -1.42
ERCC8-208ENST00000497892 MUC17Q685J3 4493 aa6.19□□□□□ -1.42
ERCC8-208ENST00000497892 TMEM256-PLSCR3K7ERE1 68 aa6.19□□□□□ -1.42
ERCC8-208ENST00000497892 TEN1Q86WV5 123 aa6.17□□□□□ -1.42
ERCC8-208ENST00000497892 UBE2V1Q13404 147 aa6.16□□□□□ -1.42
ERCC8-208ENST00000497892 NAA38Q9BRA0 125 aaKnown RBP6.16□□□□□ -1.42
ERCC8-208ENST00000497892 SS18L2Q9UHA2 77 aa6.16□□□□□ -1.42
ERCC8-208ENST00000497892 C9orf92A6NGG3 77 aa6.15□□□□□ -1.42
ERCC8-208ENST00000497892 BATFQ16520 125 aa6.15□□□□□ -1.42
ERCC8-208ENST00000497892 A0A1B0GV72 72 aa6.14□□□□□ -1.43
ERCC8-208ENST00000497892 A0A087WSZ3 146 aa6.13□□□□□ -1.43
ERCC8-208ENST00000497892 A0A1W2PNM2 257 aa6.13□□□□□ -1.43
ERCC8-208ENST00000497892 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
ERCC8-208ENST00000497892 ATXN8Q156A1 80 aa6.13□□□□□ -1.43
ERCC8-208ENST00000497892 ANKRD29Q8N6D5 301 aa6.13□□□□□ -1.43
ERCC8-208ENST00000497892 LYRM7Q5U5X0 104 aa6.12□□□□□ -1.43
ERCC8-208ENST00000497892 TRBV7-4A0A0J9YYF1 115 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms