RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 MUSTN1Q8IVN3 82 aa7.28□□□□□ -1.24
VARS-228ENST00000495010 LST1O00453 97 aa7.27□□□□□ -1.25
VARS-228ENST00000495010 SSPOA2VEC9 5147 aa7.27□□□□□ -1.25
VARS-228ENST00000495010 OCIAD2Q56VL3 154 aa7.26□□□□□ -1.25
VARS-228ENST00000495010 USH2AO75445 5202 aa7.26□□□□□ -1.25
VARS-228ENST00000495010 HIST1H2BKO60814 126 aa7.25□□□□□ -1.25
VARS-228ENST00000495010 HIST1H2BJP06899 126 aa7.25□□□□□ -1.25
VARS-228ENST00000495010 HIST1H2BOP23527 126 aa7.25□□□□□ -1.25
VARS-228ENST00000495010 HIST1H2BBP33778 126 aa7.25□□□□□ -1.25
VARS-228ENST00000495010 HIST1H2BDP58876 126 aa7.25□□□□□ -1.25
VARS-228ENST00000495010 HIST1H2BCP62807 126 aa7.25□□□□□ -1.25
VARS-228ENST00000495010 HIST2H2BEQ16778 126 aa7.25□□□□□ -1.25
VARS-228ENST00000495010 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.25□□□□□ -1.25
VARS-228ENST00000495010 Q6ZQY7 126 aa7.25□□□□□ -1.25
VARS-228ENST00000495010 HIST1H2BHQ93079 126 aa7.25□□□□□ -1.25
VARS-228ENST00000495010 HIST1H2BNQ99877 126 aa7.25□□□□□ -1.25
VARS-228ENST00000495010 HIST1H2BMQ99879 126 aa7.25□□□□□ -1.25
VARS-228ENST00000495010 hADV29S1A0JD25 119 aa7.24□□□□□ -1.25
VARS-228ENST00000495010 LINC00575Q6W349 94 aa7.24□□□□□ -1.25
VARS-228ENST00000495010 FAM236DA0A1B0GTK5 79 aa7.23□□□□□ -1.25
VARS-228ENST00000495010 S100A6P06703 90 aa7.23□□□□□ -1.25
VARS-228ENST00000495010 FAM236CP0DP71 79 aa7.23□□□□□ -1.25
VARS-228ENST00000495010 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
VARS-228ENST00000495010 C20orf166-AS1Q96NR2 134 aa7.22□□□□□ -1.25
VARS-228ENST00000495010 MT2AP02795 61 aa7.21□□□□□ -1.26
VARS-228ENST00000495010 C3orf79P0CE67 100 aa7.21□□□□□ -1.26
VARS-228ENST00000495010 SNHG12Q9BXW3 62 aa7.21□□□□□ -1.26
VARS-228ENST00000495010 A8MUU9 505 aa7.2□□□□□ -1.26
VARS-228ENST00000495010 KRTDAPP60985 99 aa7.2□□□□□ -1.26
VARS-228ENST00000495010 COA6Q5JTJ3 125 aaKnown RBP7.2□□□□□ -1.26
VARS-228ENST00000495010 SS18L2Q9UHA2 77 aa7.2□□□□□ -1.26
VARS-228ENST00000495010 SCGB1D1O95968 90 aa7.19□□□□□ -1.26
VARS-228ENST00000495010 ANKRD39Q53RE8 183 aa7.19□□□□□ -1.26
VARS-228ENST00000495010 KRTAP10-10P60014 251 aa7.18□□□□□ -1.26
VARS-228ENST00000495010 LCE2BO14633 110 aa7.17□□□□□ -1.26
VARS-228ENST00000495010 S100A2P29034 98 aa7.17□□□□□ -1.26
VARS-228ENST00000495010 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.17□□□□□ -1.26
VARS-228ENST00000495010 PPDPFLQ8WWR9 84 aa7.17□□□□□ -1.26
VARS-228ENST00000495010 FCGBPQ9Y6R7 5405 aaPredicted RBP7.17□□□□□ -1.26
VARS-228ENST00000495010 H3BUT2 72 aa7.16□□□□□ -1.26
VARS-228ENST00000495010 LINC00846Q9NV44 126 aa7.16□□□□□ -1.26
VARS-228ENST00000495010 MT1FP04733 61 aa7.15□□□□□ -1.26
VARS-228ENST00000495010 ATOH7Q8N100 152 aa7.15□□□□□ -1.26
VARS-228ENST00000495010 RBM12B-AS1Q9P1G2 102 aa7.15□□□□□ -1.26
VARS-228ENST00000495010 DSCR10P59022 87 aa7.12□□□□□ -1.27
VARS-228ENST00000495010 SNRPEP62304 92 aaKnown RBP7.12□□□□□ -1.27
VARS-228ENST00000495010 BVES-AS1Q5T3Y7 98 aa7.12□□□□□ -1.27
VARS-228ENST00000495010 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
VARS-228ENST00000495010 TMA7Q9Y2S6 64 aaKnown RBP7.12□□□□□ -1.27
VARS-228ENST00000495010 TEN1Q86WV5 123 aa7.11□□□□□ -1.27
VARS-228ENST00000495010 HIST3H2BBQ8N257 126 aa7.11□□□□□ -1.27
VARS-228ENST00000495010 C12orf57Q99622 126 aa7.1□□□□□ -1.27
VARS-228ENST00000495010 A0A087WSZ3 146 aa7.08□□□□□ -1.28
VARS-228ENST00000495010 SNCGO76070 127 aa7.08□□□□□ -1.28
VARS-228ENST00000495010 SIGMAR1Q99720 223 aa7.08□□□□□ -1.28
VARS-228ENST00000495010 HIST1H2BLQ99880 126 aa7.08□□□□□ -1.28
VARS-228ENST00000495010 LINC00313P59037 77 aa7.06□□□□□ -1.28
VARS-228ENST00000495010 KRTAP16-1A8MUX0 517 aa7.05□□□□□ -1.28
VARS-228ENST00000495010 HRES1P13985 223 aa7.04□□□□□ -1.28
VARS-228ENST00000495010 NDUFV3P56181 108 aaKnown RBP7.04□□□□□ -1.28
VARS-228ENST00000495010 MTURNQ8N3F0 131 aa7.03□□□□□ -1.28
VARS-228ENST00000495010 MACF1Q9UPN3 7388 aaKnown RBP7.02□□□□□ -1.29
VARS-228ENST00000495010 SYNE2Q8WXH0 6885 aaKnown RBP7.02□□□□□ -1.29
VARS-228ENST00000495010 HSBP1L1C9JCN9 74 aa7.02□□□□□ -1.29
VARS-228ENST00000495010 MPLKIPQ8TAP9 179 aa7.02□□□□□ -1.29
VARS-228ENST00000495010 H3BMG7 143 aa7□□□□□ -1.29
VARS-228ENST00000495010 IGKV4-1P06312 121 aa7□□□□□ -1.29
VARS-228ENST00000495010 KRTAP19-6Q3LI70 58 aa6.99□□□□□ -1.29
VARS-228ENST00000495010 HIST1H4GQ99525 98 aa6.99□□□□□ -1.29
VARS-228ENST00000495010 GHRHP01286 108 aa6.98□□□□□ -1.29
VARS-228ENST00000495010 NOTCH2NLQ7Z3S9 236 aa6.98□□□□□ -1.29
VARS-228ENST00000495010 H0YGX0 51 aa6.97□□□□□ -1.29
VARS-228ENST00000495010 FABP2P12104 132 aa6.96□□□□□ -1.3
VARS-228ENST00000495010 RAB37Q96AX2 223 aa6.95□□□□□ -1.3
VARS-228ENST00000495010 IGHV6-1A0A0B4J1U7 121 aa6.93□□□□□ -1.3
VARS-228ENST00000495010 A0A1W2PNM2 257 aa6.93□□□□□ -1.3
VARS-228ENST00000495010 FAM218AQ96MZ4 157 aa6.92□□□□□ -1.3
VARS-228ENST00000495010 DEFB116Q30KQ4 102 aa6.91□□□□□ -1.3
VARS-228ENST00000495010 KRTAP6-3Q3LI67 103 aa6.91□□□□□ -1.3
VARS-228ENST00000495010 ANKRD29Q8N6D5 301 aa6.91□□□□□ -1.3
VARS-228ENST00000495010 VAMP8Q9BV40 100 aa6.91□□□□□ -1.3
VARS-228ENST00000495010 A8MWP4 228 aa6.9□□□□□ -1.3
VARS-228ENST00000495010 TRBV7-4A0A0J9YYF1 115 aa6.89□□□□□ -1.31
VARS-228ENST00000495010 PYY3Q5JQD4 70 aa6.89□□□□□ -1.31
VARS-228ENST00000495010 LOC105371267A0A1B0GV96 52 aa6.88□□□□□ -1.31
VARS-228ENST00000495010 A0A1B0GX51 115 aa6.88□□□□□ -1.31
VARS-228ENST00000495010 SMIM6P0DI80 62 aa6.88□□□□□ -1.31
VARS-228ENST00000495010 A0A1B0GV72 72 aa6.86□□□□□ -1.31
VARS-228ENST00000495010 SPINK7P58062 85 aa6.86□□□□□ -1.31
VARS-228ENST00000495010 A0A0B4J2C4 111 aa6.85□□□□□ -1.31
VARS-228ENST00000495010 C8orf87E5RJ46 101 aa6.85□□□□□ -1.31
VARS-228ENST00000495010 SPATA45Q537H7 98 aa6.85□□□□□ -1.31
VARS-228ENST00000495010 Q8N9P0 234 aaPredicted RBP6.85□□□□□ -1.31
VARS-228ENST00000495010 ZCCHC13Q8WW36 166 aaKnown RBP6.85□□□□□ -1.31
VARS-228ENST00000495010 LINC00472Q9H8W2 130 aa6.85□□□□□ -1.31
VARS-228ENST00000495010 PAM16Q9Y3D7 125 aa6.85□□□□□ -1.31
VARS-228ENST00000495010 TRACP01848 142 aa6.84□□□□□ -1.31
VARS-228ENST00000495010 COX8AP10176 69 aa6.84□□□□□ -1.31
VARS-228ENST00000495010 DLEU1O43261 78 aa6.82□□□□□ -1.32
VARS-228ENST00000495010 DNAL4O96015 105 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms