RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 CACNA1HO95180 2353 aa0.91□□□□□ -2.26
SRRM1-218ENST00000494934 SAMD9LQ8IVG5 1584 aa0.91□□□□□ -2.26
SRRM1-218ENST00000494934 PKDREJQ9NTG1 2253 aa0.9□□□□□ -2.26
SRRM1-218ENST00000494934 WT1-ASQ06250 92 aa0.9□□□□□ -2.27
SRRM1-218ENST00000494934 IQGAP1P46940 1657 aa0.9□□□□□ -2.27
SRRM1-218ENST00000494934 TRPM2O94759 1503 aa0.89□□□□□ -2.27
SRRM1-218ENST00000494934 LOC730098B7Z3J9 87 aa0.89□□□□□ -2.27
SRRM1-218ENST00000494934 H0YGG7 62 aa0.89□□□□□ -2.27
SRRM1-218ENST00000494934 RPS27P42677 84 aaKnown RBP0.88□□□□□ -2.27
SRRM1-218ENST00000494934 RPS27LQ71UM5 84 aaKnown RBP0.88□□□□□ -2.27
SRRM1-218ENST00000494934 TTC28Q96AY4 2481 aa0.88□□□□□ -2.27
SRRM1-218ENST00000494934 NOP10Q9NPE3 64 aaKnown RBP0.87□□□□□ -2.27
SRRM1-218ENST00000494934 NDUFA1O15239 70 aa0.86□□□□□ -2.27
SRRM1-218ENST00000494934 SPTBN1Q01082 2364 aaKnown RBP0.86□□□□□ -2.27
SRRM1-218ENST00000494934 FRAS1Q86XX4 4008 aa0.86□□□□□ -2.27
SRRM1-218ENST00000494934 KIF21BO75037 1637 aa0.86□□□□□ -2.27
SRRM1-218ENST00000494934 DEFB131AP59861 70 aa0.84□□□□□ -2.27
SRRM1-218ENST00000494934 WFDC10BQ8IUB3 73 aa0.84□□□□□ -2.27
SRRM1-218ENST00000494934 U3KQA8 63 aa0.84□□□□□ -2.27
SRRM1-218ENST00000494934 CLTCL1P53675 1640 aa0.84□□□□□ -2.28
SRRM1-218ENST00000494934 TENM3Q9P273 2699 aa0.84□□□□□ -2.28
SRRM1-218ENST00000494934 ZNF292O60281 2723 aa0.83□□□□□ -2.28
SRRM1-218ENST00000494934 ALMS1Q8TCU4 4167 aa0.83□□□□□ -2.28
SRRM1-218ENST00000494934 KRTAP2-3P0C7H8 128 aa0.83□□□□□ -2.28
SRRM1-218ENST00000494934 PRLHP81277 87 aa0.83□□□□□ -2.28
SRRM1-218ENST00000494934 TFF3Q07654 80 aa0.83□□□□□ -2.28
SRRM1-218ENST00000494934 DEFB106AQ8N104 65 aa0.83□□□□□ -2.28
SRRM1-218ENST00000494934 KRTAP2-4Q9BYR9 128 aa0.83□□□□□ -2.28
SRRM1-218ENST00000494934 KRTAP2-1Q9BYU5 128 aa0.83□□□□□ -2.28
SRRM1-218ENST00000494934 CELSR2Q9HCU4 2923 aa0.82□□□□□ -2.28
SRRM1-218ENST00000494934 F8P00451 2351 aa0.82□□□□□ -2.28
SRRM1-218ENST00000494934 CHD9Q3L8U1 2897 aa0.82□□□□□ -2.28
SRRM1-218ENST00000494934 SNRPGP62308 76 aaKnown RBP0.82□□□□□ -2.28
SRRM1-218ENST00000494934 DEFB135Q30KP9 77 aa0.82□□□□□ -2.28
SRRM1-218ENST00000494934 KAAG1Q9UBP8 84 aa0.82□□□□□ -2.28
SRRM1-218ENST00000494934 S4R3F8 94 aa0.82□□□□□ -2.28
SRRM1-218ENST00000494934 NFAT5O94916 1531 aa0.82□□□□□ -2.28
SRRM1-218ENST00000494934 ABCA12Q86UK0 2595 aa0.81□□□□□ -2.28
SRRM1-218ENST00000494934 M0R2T5 61 aa0.81□□□□□ -2.28
SRRM1-218ENST00000494934 PDE4DIPQ5VU43 2346 aa0.81□□□□□ -2.28
SRRM1-218ENST00000494934 KNL1Q8NG31 2342 aa0.8□□□□□ -2.28
SRRM1-218ENST00000494934 POLQO75417 2590 aa0.79□□□□□ -2.28
SRRM1-218ENST00000494934 IGLV5-48A0A075B6I7 105 aa0.78□□□□□ -2.28
SRRM1-218ENST00000494934 SMR3AQ99954 134 aa0.78□□□□□ -2.28
SRRM1-218ENST00000494934 AKAP6Q13023 2319 aa0.78□□□□□ -2.28
SRRM1-218ENST00000494934 REV3LO60673 3130 aa0.78□□□□□ -2.29
SRRM1-218ENST00000494934 USP24Q9UPU5 2620 aa0.77□□□□□ -2.29
SRRM1-218ENST00000494934 GCC2Q8IWJ2 1684 aa0.77□□□□□ -2.29
SRRM1-218ENST00000494934 BDP1A6H8Y1 2624 aa0.77□□□□□ -2.29
SRRM1-218ENST00000494934 ABCA2Q9BZC7 2435 aa0.76□□□□□ -2.29
SRRM1-218ENST00000494934 A8MTW9 85 aa0.75□□□□□ -2.29
SRRM1-218ENST00000494934 GVINP1Q7Z2Y8 2422 aa0.75□□□□□ -2.29
SRRM1-218ENST00000494934 TPRP12270 2363 aaKnown RBP0.75□□□□□ -2.29
SRRM1-218ENST00000494934 M0QY20 66 aa0.74□□□□□ -2.29
SRRM1-218ENST00000494934 DUOX1Q9NRD9 1551 aa0.74□□□□□ -2.29
SRRM1-218ENST00000494934 TENM4Q6N022 2769 aa0.74□□□□□ -2.29
SRRM1-218ENST00000494934 C9orf92A6NGG3 77 aa0.73□□□□□ -2.29
SRRM1-218ENST00000494934 CSPG4Q6UVK1 2322 aa0.73□□□□□ -2.29
SRRM1-218ENST00000494934 TRANK1O15050 2925 aa0.72□□□□□ -2.29
SRRM1-218ENST00000494934 MROH2BQ7Z745 1585 aa0.72□□□□□ -2.29
SRRM1-218ENST00000494934 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
SRRM1-218ENST00000494934 VWFP04275 2813 aa0.72□□□□□ -2.29
SRRM1-218ENST00000494934 PCNX1Q96RV3 2341 aa0.71□□□□□ -2.3
SRRM1-218ENST00000494934 MMP24-AS1A0A0U1RRL7 71 aa0.71□□□□□ -2.3
SRRM1-218ENST00000494934 CSMD3Q7Z407 3707 aa0.71□□□□□ -2.3
SRRM1-218ENST00000494934 SPTA1P02549 2419 aa0.7□□□□□ -2.3
SRRM1-218ENST00000494934 M0QZ58 72 aa0.69□□□□□ -2.3
SRRM1-218ENST00000494934 DSPP15924 2871 aaKnown RBP0.68□□□□□ -2.3
SRRM1-218ENST00000494934 PIEZO1Q92508 2521 aa0.68□□□□□ -2.3
SRRM1-218ENST00000494934 NCOR1O75376 2440 aa0.67□□□□□ -2.3
SRRM1-218ENST00000494934 ANK2Q01484 3957 aa0.67□□□□□ -2.3
SRRM1-218ENST00000494934 A0A0C4DFX4 3053 aa0.66□□□□□ -2.3
SRRM1-218ENST00000494934 POLR2KP53803 58 aaKnown RBP0.66□□□□□ -2.3
SRRM1-218ENST00000494934 NAV2Q8IVL1 2488 aa0.66□□□□□ -2.3
SRRM1-218ENST00000494934 H3BNG1 76 aa0.65□□□□□ -2.31
SRRM1-218ENST00000494934 IGF2RP11717 2491 aa0.65□□□□□ -2.31
SRRM1-218ENST00000494934 TNP1P09430 55 aa0.64□□□□□ -2.31
SRRM1-218ENST00000494934 PTPN13Q12923 2485 aa0.64□□□□□ -2.31
SRRM1-218ENST00000494934 ATRQ13535 2644 aa0.64□□□□□ -2.31
SRRM1-218ENST00000494934 CELSR1Q9NYQ6 3014 aa0.63□□□□□ -2.31
SRRM1-218ENST00000494934 OTOGQ6ZRI0 2925 aa0.63□□□□□ -2.31
SRRM1-218ENST00000494934 EP300Q09472 2414 aaPredicted RBP0.63□□□□□ -2.31
SRRM1-218ENST00000494934 BSNQ9UPA5 3926 aa0.63□□□□□ -2.31
SRRM1-218ENST00000494934 CHD8Q9HCK8 2581 aa0.63□□□□□ -2.31
SRRM1-218ENST00000494934 CHD6Q8TD26 2715 aa0.62□□□□□ -2.31
SRRM1-218ENST00000494934 PRRC2CQ9Y520 2896 aaKnown RBP0.62□□□□□ -2.31
SRRM1-218ENST00000494934 CEP290O15078 2479 aa0.61□□□□□ -2.31
SRRM1-218ENST00000494934 PRM1P04553 51 aa0.61□□□□□ -2.31
SRRM1-218ENST00000494934 RPL39P62891 51 aaKnown RBP0.61□□□□□ -2.31
SRRM1-218ENST00000494934 PKD1L2Q7Z442 2459 aa0.61□□□□□ -2.31
SRRM1-218ENST00000494934 CLPSL2Q6UWE3 100 aa0.6□□□□□ -2.31
SRRM1-218ENST00000494934 UNC79Q9P2D8 2635 aa0.6□□□□□ -2.31
SRRM1-218ENST00000494934 PKD1L1Q8TDX9 2849 aa0.59□□□□□ -2.31
SRRM1-218ENST00000494934 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.31
SRRM1-218ENST00000494934 TOMM7Q9P0U1 55 aa0.59□□□□□ -2.31
SRRM1-218ENST00000494934 FAT2Q9NYQ8 4349 aa0.58□□□□□ -2.32
SRRM1-218ENST00000494934 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
SRRM1-218ENST00000494934 HIVEP3Q5T1R4 2406 aa0.57□□□□□ -2.32
SRRM1-218ENST00000494934 PRKDCP78527 4128 aaKnown RBP0.57□□□□□ -2.32
SRRM1-218ENST00000494934 HUWE1Q7Z6Z7 4374 aaKnown RBP0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms