RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 VAMP8Q9BV40 100 aa18.23■□□□□ 0.51
CBX4-203ENST00000494546 LCE2AQ5TA79 106 aaPredicted RBP18.22■□□□□ 0.51
CBX4-203ENST00000494546 KRTAP4-1Q9BYQ7 146 aa18.21■□□□□ 0.51
CBX4-203ENST00000494546 HIGD1BQ9P298 99 aa18.2■□□□□ 0.5
CBX4-203ENST00000494546 CFC1BP0CG36 223 aa18.19■□□□□ 0.5
CBX4-203ENST00000494546 CFC1P0CG37 223 aa18.19■□□□□ 0.5
CBX4-203ENST00000494546 C1orf195Q5TG92 126 aa18.18■□□□□ 0.5
CBX4-203ENST00000494546 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP18.18■□□□□ 0.5
CBX4-203ENST00000494546 RAB37Q96AX2 223 aa18.18■□□□□ 0.5
CBX4-203ENST00000494546 C2orf91Q6ZV80 131 aa18.15■□□□□ 0.5
CBX4-203ENST00000494546 TCL1BO95988 128 aa18.12■□□□□ 0.49
CBX4-203ENST00000494546 Q6JHZ5 121 aa18.12■□□□□ 0.49
CBX4-203ENST00000494546 A0A0B4J2C4 111 aa18.1■□□□□ 0.49
CBX4-203ENST00000494546 IGLV8-61A0A075B6I0 122 aa18.09■□□□□ 0.49
CBX4-203ENST00000494546 OCIAD2Q56VL3 154 aa18.09■□□□□ 0.49
CBX4-203ENST00000494546 IGFL1Q6UW32 110 aa18.08■□□□□ 0.48
CBX4-203ENST00000494546 CLEC2BQ92478 149 aa18.08■□□□□ 0.48
CBX4-203ENST00000494546 SNHG12Q9BXW3 62 aa18.08■□□□□ 0.48
CBX4-203ENST00000494546 PPDPFLQ8WWR9 84 aa18.07■□□□□ 0.48
CBX4-203ENST00000494546 CEND1Q8N111 149 aa18.05■□□□□ 0.48
CBX4-203ENST00000494546 PCOTHQ58A44 107 aa18.02■□□□□ 0.48
CBX4-203ENST00000494546 H0YGX0 51 aa18.01■□□□□ 0.47
CBX4-203ENST00000494546 SNCGO76070 127 aa18.01■□□□□ 0.47
CBX4-203ENST00000494546 TRBV7-7A0A0K0K1E9 115 aa18■□□□□ 0.47
CBX4-203ENST00000494546 TMEM238LA0A1B0GVL6 79 aa17.98■□□□□ 0.47
CBX4-203ENST00000494546 A6NJY4 79 aa17.98■□□□□ 0.47
CBX4-203ENST00000494546 H3BUT2 72 aa17.98■□□□□ 0.47
CBX4-203ENST00000494546 FAM218AQ96MZ4 157 aa17.98■□□□□ 0.47
CBX4-203ENST00000494546 PRO1854Q9UHT4 67 aa17.96■□□□□ 0.47
CBX4-203ENST00000494546 FXYD2P54710 66 aa17.95■□□□□ 0.46
CBX4-203ENST00000494546 PYY3Q5JQD4 70 aa17.94■□□□□ 0.46
CBX4-203ENST00000494546 TMA7Q9Y2S6 64 aaKnown RBP17.86■□□□□ 0.45
CBX4-203ENST00000494546 NDUFV3P56181 108 aaKnown RBP17.85■□□□□ 0.45
CBX4-203ENST00000494546 RPL37P61927 97 aaKnown RBP17.83■□□□□ 0.44
CBX4-203ENST00000494546 A0A1B0GX51 115 aa17.82■□□□□ 0.44
CBX4-203ENST00000494546 TRIAP1O43715 76 aa17.82■□□□□ 0.44
CBX4-203ENST00000494546 HSD52Q0P140 79 aa17.82■□□□□ 0.44
CBX4-203ENST00000494546 FABP2P12104 132 aa17.78■□□□□ 0.44
CBX4-203ENST00000494546 KRTAP9-2Q9BYQ4 174 aa17.78■□□□□ 0.44
CBX4-203ENST00000494546 LST1O00453 97 aa17.77■□□□□ 0.44
CBX4-203ENST00000494546 GHRHP01286 108 aa17.77■□□□□ 0.44
CBX4-203ENST00000494546 K7ERJ3 54 aa17.76■□□□□ 0.43
CBX4-203ENST00000494546 H3BMG7 143 aa17.74■□□□□ 0.43
CBX4-203ENST00000494546 Q6Q795 121 aa17.74■□□□□ 0.43
CBX4-203ENST00000494546 TEN1Q86WV5 123 aa17.74■□□□□ 0.43
CBX4-203ENST00000494546 PSMB2P49721 201 aa17.72■□□□□ 0.43
CBX4-203ENST00000494546 SS18L2Q9UHA2 77 aa17.72■□□□□ 0.43
CBX4-203ENST00000494546 LCE2CQ5TA81 110 aa17.71■□□□□ 0.43
CBX4-203ENST00000494546 UQCR10Q9UDW1 63 aa17.7■□□□□ 0.42
CBX4-203ENST00000494546 OBSCN-AS1Q96MR7 158 aa17.69■□□□□ 0.42
CBX4-203ENST00000494546 KRTAP19-2Q3LHN2 52 aa17.68■□□□□ 0.42
CBX4-203ENST00000494546 DNAL4O96015 105 aa17.66■□□□□ 0.42
CBX4-203ENST00000494546 A0A087WSZ3 146 aa17.65■□□□□ 0.42
CBX4-203ENST00000494546 COX6CP09669 75 aa17.63■□□□□ 0.41
CBX4-203ENST00000494546 ORMDL1Q9P0S3 153 aa17.63■□□□□ 0.41
CBX4-203ENST00000494546 A0A1B0GV72 72 aa17.57■□□□□ 0.4
CBX4-203ENST00000494546 A0A1W2PNM2 257 aa17.56■□□□□ 0.4
CBX4-203ENST00000494546 H3BQ85 93 aa17.55■□□□□ 0.4
CBX4-203ENST00000494546 Q75L30 129 aa17.54■□□□□ 0.4
CBX4-203ENST00000494546 ANKRD29Q8N6D5 301 aa17.53■□□□□ 0.4
CBX4-203ENST00000494546 Q96NJ1 140 aa17.53■□□□□ 0.4
CBX4-203ENST00000494546 TMEM256-PLSCR3K7ERE1 68 aa17.51■□□□□ 0.39
CBX4-203ENST00000494546 MT1HP80294 61 aa17.51■□□□□ 0.39
CBX4-203ENST00000494546 ATP11AUNQ6ZP68 121 aa17.51■□□□□ 0.39
CBX4-203ENST00000494546 SCGB1C2P0DMR2 95 aa17.45■□□□□ 0.38
CBX4-203ENST00000494546 TRBV7-4A0A0J9YYF1 115 aa17.43■□□□□ 0.38
CBX4-203ENST00000494546 COX6B2Q6YFQ2 88 aa17.42■□□□□ 0.38
CBX4-203ENST00000494546 SIGMAR1Q99720 223 aa17.42■□□□□ 0.38
CBX4-203ENST00000494546 TRACP01848 142 aa17.41■□□□□ 0.38
CBX4-203ENST00000494546 UBE2V1Q13404 147 aa17.39■□□□□ 0.37
CBX4-203ENST00000494546 CCKP06307 115 aa17.36■□□□□ 0.37
CBX4-203ENST00000494546 DSCR10P59022 87 aa17.36■□□□□ 0.37
CBX4-203ENST00000494546 C20orf166-AS1Q96NR2 134 aa17.36■□□□□ 0.37
CBX4-203ENST00000494546 IGKV4-1P06312 121 aa17.33■□□□□ 0.36
CBX4-203ENST00000494546 A8MUU9 505 aa17.32■□□□□ 0.36
CBX4-203ENST00000494546 VPS25Q9BRG1 176 aa17.27■□□□□ 0.36
CBX4-203ENST00000494546 RBM3P98179 157 aaKnown RBP17.26■□□□□ 0.35
CBX4-203ENST00000494546 DEFB116Q30KQ4 102 aa17.26■□□□□ 0.35
CBX4-203ENST00000494546 M0R143 59 aa17.25■□□□□ 0.35
CBX4-203ENST00000494546 M0R2T5 61 aa17.25■□□□□ 0.35
CBX4-203ENST00000494546 LINC00313P59037 77 aa17.24■□□□□ 0.35
CBX4-203ENST00000494546 LCE2DQ5TA82 110 aaPredicted RBP17.24■□□□□ 0.35
CBX4-203ENST00000494546 BAALC-AS2P0C853 105 aa17.23■□□□□ 0.35
CBX4-203ENST00000494546 LINC00472Q9H8W2 130 aa17.23■□□□□ 0.35
CBX4-203ENST00000494546 DSCR8Q96T75 97 aa17.22■□□□□ 0.35
CBX4-203ENST00000494546 NAA38Q9BRA0 125 aaKnown RBP17.19■□□□□ 0.34
CBX4-203ENST00000494546 KRTAP10-6P60371 365 aaPredicted RBP17.17■□□□□ 0.34
CBX4-203ENST00000494546 KRTAP9-6A0A140TA67 174 aa17.16■□□□□ 0.34
CBX4-203ENST00000494546 SMIM6P0DI80 62 aa17.15■□□□□ 0.34
CBX4-203ENST00000494546 LORP23490 312 aaPredicted RBP17.14■□□□□ 0.33
CBX4-203ENST00000494546 NOTCH2NLQ7Z3S9 236 aa17.14■□□□□ 0.33
CBX4-203ENST00000494546 IGHV6-1A0A0B4J1U7 121 aa17.12■□□□□ 0.33
CBX4-203ENST00000494546 KRTAP16-1A8MUX0 517 aa17.12■□□□□ 0.33
CBX4-203ENST00000494546 ATXN8Q156A1 80 aa17.12■□□□□ 0.33
CBX4-203ENST00000494546 C9JAW5 83 aa17.11■□□□□ 0.33
CBX4-203ENST00000494546 FLGP20930 4061 aaPredicted RBP17.06■□□□□ 0.32
CBX4-203ENST00000494546 TRBV20-1A0A075B6N2 111 aa17.03■□□□□ 0.32
CBX4-203ENST00000494546 C21orf62-AS1Q17RA5 79 aa17■□□□□ 0.31
CBX4-203ENST00000494546 A0A1B0GVX0 72 aa16.99■□□□□ 0.31
CBX4-203ENST00000494546 TSTD3H0UI37 97 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms