RNA–Protein interactions for RNA: ENST00000494397.5

ARHGAP4-223, Transcript of Rho GTPase activating protein 4, human

TSL 5

Gene ARHGAP4, Length 1,752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-223	ENST00000494397		A0A1W2PNM2	257 aa		13.87	□□□□□ -0.19
ARHGAP4-223	ENST00000494397		Q8NBF4	154 aa		13.87	□□□□□ -0.19
ARHGAP4-223	ENST00000494397	IGLV8-61	A0A075B6I0	122 aa		13.86	□□□□□ -0.19
ARHGAP4-223	ENST00000494397	CXCL6	P80162	114 aa		13.86	□□□□□ -0.19
ARHGAP4-223	ENST00000494397	HAMP	P81172	84 aa		13.86	□□□□□ -0.19
ARHGAP4-223	ENST00000494397	HIST1H4A	P62805	103 aa	Known RBP	13.85	□□□□□ -0.19
ARHGAP4-223	ENST00000494397	KRTAP10-2	P60368	255 aa		13.83	□□□□□ -0.19
ARHGAP4-223	ENST00000494397	SPRR4	Q96PI1	79 aa		13.83	□□□□□ -0.2
ARHGAP4-223	ENST00000494397	PSORS1C2	Q9UIG4	136 aa		13.82	□□□□□ -0.2
ARHGAP4-223	ENST00000494397		A0A087WVE0	104 aa		13.81	□□□□□ -0.2
ARHGAP4-223	ENST00000494397	NREP	Q16612	68 aa		13.81	□□□□□ -0.2
ARHGAP4-223	ENST00000494397	IGFL1	Q6UW32	110 aa		13.79	□□□□□ -0.2
ARHGAP4-223	ENST00000494397	CRYGA	P11844	174 aa		13.77	□□□□□ -0.21
ARHGAP4-223	ENST00000494397	SMIM20	Q8N5G0	67 aa		13.76	□□□□□ -0.21
ARHGAP4-223	ENST00000494397	ATOX1	O00244	68 aa		13.75	□□□□□ -0.21
ARHGAP4-223	ENST00000494397	ZNF706	Q9Y5V0	76 aa	Predicted RBP	13.73	□□□□□ -0.21
ARHGAP4-223	ENST00000494397	ZNF861P	O60384	105 aa		13.73	□□□□□ -0.21
ARHGAP4-223	ENST00000494397	FAM30A	Q9NZY2	134 aa		13.71	□□□□□ -0.21
ARHGAP4-223	ENST00000494397	LINC00483	Q53H64	154 aa		13.71	□□□□□ -0.22
ARHGAP4-223	ENST00000494397		Q6ZSA8	131 aa		13.71	□□□□□ -0.22
ARHGAP4-223	ENST00000494397	SCX	Q7RTU7	201 aa		13.71	□□□□□ -0.22
ARHGAP4-223	ENST00000494397	CIRBP-AS1	Q8TBR5	109 aa		13.71	□□□□□ -0.22
ARHGAP4-223	ENST00000494397	DNAH11	Q96DT5	4516 aa		13.7	□□□□□ -0.22
ARHGAP4-223	ENST00000494397	FRAS1	Q86XX4	4008 aa		13.7	□□□□□ -0.22
ARHGAP4-223	ENST00000494397	BPY2	O14599	106 aa		13.69	□□□□□ -0.22
ARHGAP4-223	ENST00000494397	HYDIN	Q4G0P3	5121 aa		13.69	□□□□□ -0.22
ARHGAP4-223	ENST00000494397		A0A0G2JQZ4	141 aa		13.68	□□□□□ -0.22
ARHGAP4-223	ENST00000494397	KRTAP10-1	P60331	282 aa		13.67	□□□□□ -0.22
ARHGAP4-223	ENST00000494397	DNAH5	Q8TE73	4624 aa		13.66	□□□□□ -0.22
ARHGAP4-223	ENST00000494397	CCDC179	H3BU77	68 aa		13.66	□□□□□ -0.22
ARHGAP4-223	ENST00000494397	DNAH8	Q96JB1	4490 aa		13.65	□□□□□ -0.22
ARHGAP4-223	ENST00000494397	IGLV7-43	P04211	117 aa		13.65	□□□□□ -0.22
ARHGAP4-223	ENST00000494397	LCE6A	A0A183	80 aa		13.64	□□□□□ -0.23
ARHGAP4-223	ENST00000494397	FAT2	Q9NYQ8	4349 aa		13.61	□□□□□ -0.23
ARHGAP4-223	ENST00000494397	RPL37A	P61513	92 aa	Known RBP	13.6	□□□□□ -0.23
ARHGAP4-223	ENST00000494397		A0A087WSZ3	146 aa		13.6	□□□□□ -0.23
ARHGAP4-223	ENST00000494397	C5orf47	Q569G3	176 aa		13.6	□□□□□ -0.23
ARHGAP4-223	ENST00000494397	IGKV4-1	P06312	121 aa		13.59	□□□□□ -0.23
ARHGAP4-223	ENST00000494397	SRRM2	Q9UQ35	2752 aa	Known RBP	13.58	□□□□□ -0.24
ARHGAP4-223	ENST00000494397	UQCRQ	O14949	82 aa		13.58	□□□□□ -0.24
ARHGAP4-223	ENST00000494397	COX7C	P15954	63 aa		13.58	□□□□□ -0.24
ARHGAP4-223	ENST00000494397	IGLV9-49	A0A0B4J1Y8	123 aa		13.57	□□□□□ -0.24
ARHGAP4-223	ENST00000494397	LINC00336	Q6ZUF6	198 aa		13.57	□□□□□ -0.24
ARHGAP4-223	ENST00000494397	SERP2	Q8N6R1	65 aa		13.57	□□□□□ -0.24
ARHGAP4-223	ENST00000494397	C9orf153	Q5TBE3	101 aa		13.56	□□□□□ -0.24
ARHGAP4-223	ENST00000494397		Q8N9L7	120 aa		13.56	□□□□□ -0.24
ARHGAP4-223	ENST00000494397	PKD1	P98161	4303 aa		13.55	□□□□□ -0.24
ARHGAP4-223	ENST00000494397	SACS	Q9NZJ4	4579 aa		13.52	□□□□□ -0.25
ARHGAP4-223	ENST00000494397	DSCR10	P59022	87 aa		13.51	□□□□□ -0.25
ARHGAP4-223	ENST00000494397	ANAPC11	Q9NYG5	84 aa		13.48	□□□□□ -0.25
ARHGAP4-223	ENST00000494397	MOBP	Q13875	183 aa		13.47	□□□□□ -0.25
ARHGAP4-223	ENST00000494397	TRAV7	A0A075B6U4	112 aa		13.44	□□□□□ -0.26
ARHGAP4-223	ENST00000494397		K7EQZ3	153 aa		13.43	□□□□□ -0.26
ARHGAP4-223	ENST00000494397	LINC00472	Q9H8W2	130 aa		13.43	□□□□□ -0.26
ARHGAP4-223	ENST00000494397	RPS28	P62857	69 aa	Known RBP	13.42	□□□□□ -0.26
ARHGAP4-223	ENST00000494397		J3KT08	172 aa		13.41	□□□□□ -0.26
ARHGAP4-223	ENST00000494397	DEFB116	Q30KQ4	102 aa		13.4	□□□□□ -0.26
ARHGAP4-223	ENST00000494397		A0A1B0GVY2	172 aa		13.38	□□□□□ -0.27
ARHGAP4-223	ENST00000494397	LRP1B	Q9NZR2	4599 aa		13.36	□□□□□ -0.27
ARHGAP4-223	ENST00000494397	HRCT1	Q6UXD1	115 aa		13.35	□□□□□ -0.27
ARHGAP4-223	ENST00000494397	SSBP3-AS1	Q7Z2R9	100 aa		13.33	□□□□□ -0.28
ARHGAP4-223	ENST00000494397		A8MWP4	228 aa		13.32	□□□□□ -0.28
ARHGAP4-223	ENST00000494397	HCG22	E2RYF7	251 aa		13.32	□□□□□ -0.28
ARHGAP4-223	ENST00000494397	FAM229B	Q4G0N7	80 aa		13.31	□□□□□ -0.28
ARHGAP4-223	ENST00000494397	RYR2	Q92736	4967 aa		13.31	□□□□□ -0.28
ARHGAP4-223	ENST00000494397	OCR1	Q9BZK8	76 aa		13.3	□□□□□ -0.28
ARHGAP4-223	ENST00000494397	CD164	Q04900	197 aa		13.3	□□□□□ -0.28
ARHGAP4-223	ENST00000494397	PRR15	Q8IV56	129 aa		13.3	□□□□□ -0.28
ARHGAP4-223	ENST00000494397		Q96NJ1	140 aa		13.29	□□□□□ -0.28
ARHGAP4-223	ENST00000494397	C20orf197	Q8N268	126 aa		13.26	□□□□□ -0.29
ARHGAP4-223	ENST00000494397		A0A087X002	238 aa		13.23	□□□□□ -0.29
ARHGAP4-223	ENST00000494397	CYSTM1	Q9H1C7	97 aa		13.23	□□□□□ -0.29
ARHGAP4-223	ENST00000494397	NDUFB1	O75438	58 aa		13.22	□□□□□ -0.29
ARHGAP4-223	ENST00000494397	KRTAP1-4	P0C5Y4	121 aa		13.22	□□□□□ -0.29
ARHGAP4-223	ENST00000494397	KRTAP13-2	Q52LG2	175 aa		13.21	□□□□□ -0.29
ARHGAP4-223	ENST00000494397	DYNC1H1	Q14204	4646 aa	Known RBP	13.2	□□□□□ -0.3
ARHGAP4-223	ENST00000494397	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.2	□□□□□ -0.3
ARHGAP4-223	ENST00000494397	KLKP1	Q107X0	134 aa		13.2	□□□□□ -0.3
ARHGAP4-223	ENST00000494397	WFDC13	Q8IUB5	93 aa		13.19	□□□□□ -0.3
ARHGAP4-223	ENST00000494397	SPINK6	Q6UWN8	80 aa		13.18	□□□□□ -0.3
ARHGAP4-223	ENST00000494397	PKHD1	P08F94	4074 aa		13.18	□□□□□ -0.3
ARHGAP4-223	ENST00000494397	TMEM258	P61165	79 aa		13.17	□□□□□ -0.3
ARHGAP4-223	ENST00000494397	CASC2	Q6XLA1	102 aa		13.17	□□□□□ -0.3
ARHGAP4-223	ENST00000494397	TMEM254	Q8TBM7	123 aa		13.15	□□□□□ -0.3
ARHGAP4-223	ENST00000494397	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.14	□□□□□ -0.31
ARHGAP4-223	ENST00000494397	ASB16-AS1	Q495Z4	193 aa		13.14	□□□□□ -0.31
ARHGAP4-223	ENST00000494397	MMP24-AS1	A0A0U1RRL7	71 aa		13.12	□□□□□ -0.31
ARHGAP4-223	ENST00000494397	CDK2AP2	O75956	126 aa		13.12	□□□□□ -0.31
ARHGAP4-223	ENST00000494397	PLA2G1B	P04054	148 aa	Known RBP	13.12	□□□□□ -0.31
ARHGAP4-223	ENST00000494397	SNURF	Q9Y675	71 aa		13.11	□□□□□ -0.31
ARHGAP4-223	ENST00000494397	VPS13B	Q7Z7G8	4022 aa		13.1	□□□□□ -0.31
ARHGAP4-223	ENST00000494397		A0A1B0GVX0	72 aa		13.1	□□□□□ -0.31
ARHGAP4-223	ENST00000494397	SMR3B	P02814	79 aa	Predicted RBP	13.09	□□□□□ -0.31
ARHGAP4-223	ENST00000494397		Q5XG85	94 aa		13.09	□□□□□ -0.31
ARHGAP4-223	ENST00000494397		A0A0U1RQV1	116 aa		13.08	□□□□□ -0.32
ARHGAP4-223	ENST00000494397	NDUFC1	O43677	76 aa		13.07	□□□□□ -0.32
ARHGAP4-223	ENST00000494397	C8orf17	Q9NRJ1	99 aa		13.07	□□□□□ -0.32
ARHGAP4-223	ENST00000494397	hDV103S1	A0JD37	113 aa		13.06	□□□□□ -0.32
ARHGAP4-223	ENST00000494397	IGHV6-1	A0A0B4J1U7	121 aa		13.04	□□□□□ -0.32
ARHGAP4-223	ENST00000494397		H7BZZ5	65 aa		13.04	□□□□□ -0.32

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